Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040213_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:32148662:32152116:-1 gene:Zm00001d040213 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCGGCCCATCCAACCCCTCCCGCCGCGCGCCTCAGCGGCGTCACATCCCGCCGCCAC
GCGGAGCTGCTTCTCCACAGCGGCGTCGACGGCGTTTCTGTCAAGGACCTCCGCCTCCGC
CGCATCGTCCCACCCGCCGCCGGCTCCCTCGACACCTCCCCCAAGTGCGTCTCACCCGTG
AAACCCGGATCTGTTGACAGCACGCCTCCGGAGGCTGTGTCGTCAGCGGCGGCGGCGGCG
GCCGGGGACCTTGACCGGAAGTTGGCGCCCCCGCGGTCTAAGCTCGTCCGCGATCCACGC
TCGTTTGGCTACCGGCGCCTGCTGCCTTTCCTGAACGAGATGACGAAAAACAATAGCTCA
ATCGGCAAGGAGGTGTTCCTGCAAGACACGGCTGCACACCCAACGGATGAGCTCAGCCGA
TCTGATTCTCGGTTAGCTGATGAATCTATAGGCGTTAGTCACAGCGAACCTGATGCCATG
GATCCTGTCGAGCCGGCGGTGGTGAGCACTGGAGGAGACACCGATGGGAAGGCTACCTGC
GGCAATGTCATGGAAGAGACCAAGACTGCCCCTCATGACCTAACTAACAAGCCGTTGCTT
GCCCGATGCACAAGGTCGAGGTTTGTCCATCATCCAAGCTCGTTCAGCTACAAGAGGATG
CTGCCATTTCTAATGGAAGACGAAATATATGCTCAAGAAAGTGGCAGGGTCAAAATTCGA
AAAGTTGCTGAGGAAAGGCAGTTTGCGGCAAACAAGCATGATGCCTCAGCCAATGGGCAG
CAGTGTCTTGCTGTCTCGGATGACTCTTCTCAGGAAGGCAATAGAGCTCAATTTAAAATA
GTGGAAGAAGAAAAGCCACTAAAAGCAGATGTGAATCATATTCTTGATGACAGACAGCTT
AAGCCTCCTGTCATAGAAGCGTCTCCTGATTGTAGTGCAACTGAAGTGCAAAATGTCATG
CAGCAAGAAGCTTTAGCTTCAAGTCAAGTTCCCCTAACTTCTTTTGATGGTGAATTAACA
TCAGACGGGGACAATGTCCAGTCCATTGGACAACATCAGCTTGTTGTATCAGAAGAGTCT
CAAGAGGAATGCAAAAGAGATGAAGTCAACAGAAGCATTCACGATGAAGCAGTACAATCA
GATGGGGGCTATGCTCTGGATAGCAGAGAATTTCAGCCTGCTGCATCAGAAGTCTCTTGT
TCAGAAAACAGCATGGCTGGAGTGCAAGGGGCTGCACAAGAAGAACCGTTACCTTTAGAT
GGAGTTCAGGAAAATTCAGACATGGGCGACGATGTTTCCACAGAGCAGGCTCAGCTCTGT
GTCACAAGTGAATCCTTGTCTGCGCAGCTGCAAAACAATGCTGAATTCGCTGAAGTACTG
CCGTGCCAAGACTTGGACTCAGGATGTCACGACATTGGTTTCGGTAGTCCTACCAAGAGA
GTCGTACCATCGTTGCATCGGCATTGCGCACAACAACCTCAGGACTCTGTGGTTTCTCAT
GATGATCAGCTTCTTGACGATGACATACAAATGGTCGGCAGACTTTCTGATCCCTGTGCT
GCTGACAGATCCTCATCAATGGAGGAAATGTCTGGCCGCATTCTGTTCACCCAATCAGCA
TCGAGCAAAGCAGCCATATCATGGCCAAGTGGTGCCCATTCAATGGAAAAAAGAGCTCGG
TCTCCTAAGGAGCTTTCCCCAAAGAAAGGGATACTCAAGAGGAGTACACGGGGGTGCAAG
GGTATCTGCATGTGCCTGGACTGCTGTACGTTTCGCCTACACGCCGACCGAGCTTTCGAG
TTCTCCAGGAAGCAGATGAGAGAAGCCGATGACATCATAAGTAACTTACTGAAGGAGGTG
GACAGTCTTAGGAGCCTGCTGGAGAAGCATGCTGGCCAAGTAAGTATAAATCCGTGCATT
TCAGTTTTTGTTTCTTTTTTTTTCTTCTCCTCATCATCATGA

Peptide Sequence

PEP ID

Zm00001d040213_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:32148662:32152116:-1 gene:Zm00001d040213 transcript:Zm00001d040213_T003 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPAHPTPPAARLSGVTSRRHAELLLHSGVDGVSVKDLRLRRIVPPAAGSLDTSPKCVSPV
KPGSVDSTPPEAVSSAAAAAAGDLDRKLAPPRSKLVRDPRSFGYRRLLPFLNEMTKNNSS
IGKEVFLQDTAAHPTDELSRSDSRLADESIGVSHSEPDAMDPVEPAVVSTGGDTDGKATC
GNVMEETKTAPHDLTNKPLLARCTRSRFVHHPSSFSYKRMLPFLMEDEIYAQESGRVKIR
KVAEERQFAANKHDASANGQQCLAVSDDSSQEGNRAQFKIVEEEKPLKADVNHILDDRQL
KPPVIEASPDCSATEVQNVMQQEALASSQVPLTSFDGELTSDGDNVQSIGQHQLVVSEES
QEECKRDEVNRSIHDEAVQSDGGYALDSREFQPAASEVSCSENSMAGVQGAAQEEPLPLD
GVQENSDMGDDVSTEQAQLCVTSESLSAQLQNNAEFAEVLPCQDLDSGCHDIGFGSPTKR
VVPSLHRHCAQQPQDSVVSHDDQLLDDDIQMVGRLSDPCAADRSSSMEEMSGRILFTQSA
SSKAAISWPSGAHSMEKRARSPKELSPKKGILKRSTRGCKGICMCLDCCTFRLHADRAFE
FSRKQMREADDIISNLLKEVDSLRSLLEKHAGQVSINPCISVFVSFFFFSSSS

Transcript Sequence

Transcript ID

Zm00001d040213_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:32148662:32152116:-1 gene:Zm00001d040213 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGACGCGGCCGCCCCTACCCTAGCAGGCGCGGACGCAGCCACCATGCCGGCCCATCCAAC
CCCTCCCGCCGCGCGCCTCAGCGGCGTCACATCCCGCCGCCACGCGGAGCTGCTTCTCCA
CAGCGGCGTCGACGGCGTTTCTGTCAAGGACCTCCGCCTCCGCCGCATCGTCCCACCCGC
CGCCGGCTCCCTCGACACCTCCCCCAAGTGCGTCTCACCCGTGAAACCCGGATCTGTTGA
CAGCACGCCTCCGGAGGCTGTGTCGTCAGCGGCGGCGGCGGCGGCCGGGGACCTTGACCG
GAAGTTGGCGCCCCCGCGGTCTAAGCTCGTCCGCGATCCACGCTCGTTTGGCTACCGGCG
CCTGCTGCCTTTCCTGAACGAGATGACGAAAAACAATAGCTCAATCGGCAAGGAGGTGTT
CCTGCAAGACACGGCTGCACACCCAACGGATGAGCTCAGCCGATCTGATTCTCGGTTAGC
TGATGAATCTATAGGCGTTAGTCACAGCGAACCTGATGCCATGGATCCTGTCGAGCCGGC
GGTGGTGAGCACTGGAGGAGACACCGATGGGAAGGCTACCTGCGGCAATGTCATGGAAGA
GACCAAGACTGCCCCTCATGACCTAACTAACAAGCCGTTGCTTGCCCGATGCACAAGGTC
GAGGTTTGTCCATCATCCAAGCTCGTTCAGCTACAAGAGGATGCTGCCATTTCTAATGGA
AGACGAAATATATGCTCAAGAAAGTGGCAGGGTCAAAATTCGAAAAGTTGCTGAGGAAAG
GCAGTTTGCGGCAAACAAGCATGATGCCTCAGCCAATGGGCAGCAGTGTCTTGCTGTCTC
GGATGACTCTTCTCAGGAAGGCAATAGAGCTCAATTTAAAATAGTGGAAGAAGAAAAGCC
ACTAAAAGCAGATGTGAATCATATTCTTGATGACAGACAGCTTAAGCCTCCTGTCATAGA
AGCGTCTCCTGATTGTAGTGCAACTGAAGTGCAAAATGTCATGCAGCAAGAAGCTTTAGC
TTCAAGTCAAGTTCCCCTAACTTCTTTTGATGGTGAATTAACATCAGACGGGGACAATGT
CCAGTCCATTGGACAACATCAGCTTGTTGTATCAGAAGAGTCTCAAGAGGAATGCAAAAG
AGATGAAGTCAACAGAAGCATTCACGATGAAGCAGTACAATCAGATGGGGGCTATGCTCT
GGATAGCAGAGAATTTCAGCCTGCTGCATCAGAAGTCTCTTGTTCAGAAAACAGCATGGC
TGGAGTGCAAGGGGCTGCACAAGAAGAACCGTTACCTTTAGATGGAGTTCAGGAAAATTC
AGACATGGGCGACGATGTTTCCACAGAGCAGGCTCAGCTCTGTGTCACAAGTGAATCCTT
GTCTGCGCAGCTGCAAAACAATGCTGAATTCGCTGAAGTACTGCCGTGCCAAGACTTGGA
CTCAGGATGTCACGACATTGGTTTCGGTAGTCCTACCAAGAGAGTCGTACCATCGTTGCA
TCGGCATTGCGCACAACAACCTCAGGACTCTGTGGTTTCTCATGATGATCAGCTTCTTGA
CGATGACATACAAATGGTCGGCAGACTTTCTGATCCCTGTGCTGCTGACAGATCCTCATC
AATGGAGGAAATGTCTGGCCGCATTCTGTTCACCCAATCAGCATCGAGCAAAGCAGCCAT
ATCATGGCCAAGTGGTGCCCATTCAATGGAAAAAAGAGCTCGGTCTCCTAAGGAGCTTTC
CCCAAAGAAAGGGATACTCAAGAGGAGTACACGGGGGTGCAAGGGTATCTGCATGTGCCT
GGACTGCTGTACGTTTCGCCTACACGCCGACCGAGCTTTCGAGTTCTCCAGGAAGCAGAT
GAGAGAAGCCGATGACATCATAAGTAACTTACTGAAGGAGGTGGACAGTCTTAGGAGCCT
GCTGGAGAAGCATGCTGGCCAAGTAAGTATAAATCCGTGCATTTCAGTTTTTGTTTCTTT
TTTTTTCTTCTCCTCATCATCATGAAGTTTTTGTGCAATTAGGAATGCTAATATCCACTC
TTCACTAGTATGACGAGTTCTACATTGACCTGTGGTGACCATTTGACCTGAATACTTACT
TTGTCCTGAGCTTCCCATCTCCTTTACATTATTTGGCTGGCTGTTCCAGTGTCTGAAATT
CGCGTTGAATATGCCTTGCTAAACGCACGGGCAGTTCTGTACTCACCAAAGTATACGGAA
CCCTCGATTCTTACTTCTTACCGTCGTCTGAAAATTGCAACCGGAATCAACACAGGCAGC
CCGAAGACAGGCCTGCCGGGTGCAGGAGGTGGCCAGGAACCGCTGCCAGCAGATGTTTGC
GGATCTAAACTCCCACTGCAGAATCCCCGGACCAAGGGTTAGGTTCGCCGAATACGTCGA
GGAGAAGGCCGCGTCGTCTCCACGCAGGAGCAGCCGGAGGTGACTGGATTTCAGGAGGTG
GCAGGTGAACTGGCCTGCCCGATCGTGTTGCTGAATTGTTCGGTACAATAACTAAGTAGT
GCTGCTTGGCGAACCATCACCCTTGTCACTGGTTTGTGTTGGTTTGCCATGCTTTGAGCT
TTGAGTTTTGTACTGTATACTATGTGTTCCCTACATTCCAGAAAATTGTAAGTCGATTTG
ACTTTTTAGTTATATGCCTAGTTACATAGCAAAAGTTATTACATATCTAGAAAAGTCGGA
GTGACTTGTAATTTGAAGAGGAGGGGATACAATTTATATATTCATAGACAATAGCT