Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040202_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:3:31827897:31838331:1 gene:Zm00001d040202 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF7 family protein
Sequence

ATGAAGAAGATCTTCGGCGCCAAGAAGGACAAGGGGCCGCCCCCCTCCATCCAGGACGCC
ACCGAGCGAATAAACAAGCGGGGTGAGACGGTGGACGAGAAGATCAAGAAGCTGGACGAG
GAGCTAGCCAGGTACAAGGAGCAGATCCGCAAGACCCGCCCCGGCCCGTCCCAGGAAGCC
ATCAAGGCACGCGCCATCCGACTCCTCAAGCACAAGCGCATGTACGAGGAGCAACGCAAC
ATGTTGTACAACCAAACCTACAATCTCGACCAAGTTGGCTTTGCTGCCGATGGCCTCAAG
GATGCTCAGCAGACTATGAATGCAATGAAGGCAGCAAACAAGGAGCTCAAGGGAATGATG
AAAACTGTCAAAATTGATGAAATTGATAATATGCAAGATGAAATGACAGATCTGATGGAC
GTGAGCAATGAGATACAAGAAACTCTTGGTAGAAGCTACAACATCCCTGATGACGTTGAC
GAGGAAGAACTGATGGGCGAGCTAGATGCTTTGGAGTCTGATATGGAATTTGACTCAGCT
GCAGTCCCCTCATATCTTCAACCAGATTCTGACTTTGATGCTGACCTCAACTTACCTGCT
GCACCAAGTCGCCCTGCAATGGTCCCAGCAGGCGGGCTGCAGGAGGATGAGCTAGGATTG
CCAGCGGTGCCTCGGGCATCACTTCGCAGTTAG

Peptide Sequence

PEP ID

Zm00001d040202_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:3:31827897:31838331:1 gene:Zm00001d040202 transcript:Zm00001d040202_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF7 family protein
Sequence

MKKIFGAKKDKGPPPSIQDATERINKRGETVDEKIKKLDEELARYKEQIRKTRPGPSQEA
IKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVGFAADGLKDAQQTMNAMKAANKELKGMM
KTVKIDEIDNMQDEMTDLMDVSNEIQETLGRSYNIPDDVDEEELMGELDALESDMEFDSA
AVPSYLQPDSDFDADLNLPAAPSRPAMVPAGGLQEDELGLPAVPRASLRS

Transcript Sequence

Transcript ID

Zm00001d040202_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:31827897:31838331:1 gene:Zm00001d040202 gene_biotype:protein_coding transcript_biotype:protein_coding description:SNF7 family protein
Sequence

AGCCCCCTGTCAACATCTCGATTTCGAATTTCACCCAGCTCCGCACGCGCCTCAACCCTT
CCTCTCGGGCGGCGGCGCCGGCAAGGCGGCAGCCAACCGGAGCGGGAGCTGCGATGAAGA
AGATCTTCGGCGCCAAGAAGGACAAGGGGCCGCCCCCCTCCATCCAGGACGCCACCGAGC
GAATAAACAAGCGGGGTGAGACGGTGGACGAGAAGATCAAGAAGCTGGACGAGGAGCTAG
CCAGGTACAAGGAGCAGATCCGCAAGACCCGCCCCGGCCCGTCCCAGGAAGCCATCAAGG
CACGCGCCATCCGACTCCTCAAGCACAAGCGCATGTACGAGGAGCAACGCAACATGTTGT
ACAACCAAACCTACAATCTCGACCAAGTTGGCTTTGCTGCCGATGGCCTCAAGGATGCTC
AGCAGACTATGAATGCAATGAAGGCAGCAAACAAGGAGCTCAAGGGAATGATGAAAACTG
TCAAAATTGATGAAATTGATAATATGCAAGATGAAATGACAGATCTGATGGACGTGAGCA
ATGAGATACAAGAAACTCTTGGTAGAAGCTACAACATCCCTGATGACGTTGACGAGGAAG
AACTGATGGGCGAGCTAGATGCTTTGGAGTCTGATATGGAATTTGACTCAGCTGCAGTCC
CCTCATATCTTCAACCAGATTCTGACTTTGATGCTGACCTCAACTTACCTGCTGCACCAA
GTCGCCCTGCAATGGTCCCAGCAGGCGGGCTGCAGGAGGATGAGCTAGGATTGCCAGCGG
TGCCTCGGGCATCACTTCGCAGTTAGAAATAATCTTGTGTTTCGATTTTAAGTTGGTGTG
AAAACTCTGTAGTTTGTGTCTGAGTCTGAACAATCTAATGCTTTTCGTCATGGTAATGCT
TCAGTTTATTGCACTTCCTGTTGCTGCTGACGTTTCAGGTTCCTTTTTTTTGTCATTCTG
GAATTTTTCATCTGTCACCTGTCACTTGAGCCGTGTTTGTTTGCAAGTACACGTCACTAT
ACAGCAATTATTCCAGGGGAAAAAATCACTGTACACACCAGTAATTCTCCAAGACAAGTC
GGCAGAGTGAACAGAAGACTGAGGGGAAAATATCTTGGAGGCTGTTGTATTCTTGCAATG
CAGTATCCTTTTTGCTAGCAATAGCACTCCCTTTTGTTTACAATAATTGAGGCAAGATAA
CTATCAGGATCAAAGGTGGAAATATCTTTTCCAAGGGGTTCAAAATATCAGGCAACAGGG
GTGAGCGGGTCCCCCTTCTCCTTGGTCCAAGAACACCGGTAGAGGGGTACCACATACCAG
AATCTTATCCAGAGCAGGGAACCCCTCCTGGCCCTGCAGTATATAACGGAGGGGGTCACC
ACACAAAATAGATAAGCGTTCCAGATCGTACTGGACCAATCTGCCACCACACTTTGATCA
CACACAGGAAGTTGAGATCAGAAAAATGCAGGCTGCCGCTACTGCCGCCGGGTTCTCGGC
CGTGCTGCCCGCCAAGGGCAGGCCGGCGGCGAGGAGCAGGGTGGTGGCCCGTGTCCCCGC
CACAAGGAGGAGCGTCCGTGTAGCTGCCGTCGTCGCGACCGAGGCCGCGCAGATCGACTA
CAGCTCAAGCGTCTCGGTGTTCCCGATGGAGGCCTGCGACCTGCTTGGTGGCGACGCGTG
CAACGGGCCCATGTTCCCGGAGGCCAAGCCCGCCTCGGCGGCGGCGGCGGCGAGCAGGAG
TGTGGTCGGGGTGGACAGGGACTACCTGTCCTACGACGAGCCAAAGACGGTGTTCCCGGG
CGAGGCGTGCGATGACCTTGGCGGCGAGTTCTGCGAGGCGCCGTACCAGGACGGCGTCTC
CAAGGAGCTGGCGCACGCCTGAAGACCCTGATCCATCCATTTCTGTCCACCACGCTATGT
ACGTATGTGTAGCAGATGGTTTACATCTACGTGTTAGAGCCCGGAGAGCTGGAGAAGCTA
GCTAGCGTGCTTACAGAATAACAGCAGCCAAGCAAAGCCAAGGGTGTGTATATAATAGGC
ATGCCTTGGGTTGTGTCAGCTGCGACTGTATGTATAGTTTAAACCAAGATGAAATGGTAC
TGATGGTGATATTCCGTGTTTTACGATACAAAGGCTAGAAAATAGATTTTGCCTGGATAT
CAGATAGCTTTCAACTACCACAAAATATTATTTCTACC