Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040190_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:31509737:31513060:-1 gene:Zm00001d040190 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	ATGGAGTTTCCGCACCACCACCACCACCACGGCCATCGCCGCGACGACGACGAAGACGAC CGCAGAGGCCCGCCTCCCCCGGTCTACGGCGGCTACGGCCAGCCACCGCCACCCGACCCG TACGGCCGCGCGCCCGTCGACCCCGATCCGTACGGTCGACCTCCGCCCCAGTCCGCGTAC GGTGGGGCCGGGGACGCCTACGGCCACAGCGGCCAAGGCTACGCGCCCCCGCCGGCCTAC GGCGCCGGGGGCGGGTACGGCAACGTCGTCCACGTCGCGCACGAGGTCGGCGACGAGAGG CCTTACTACGGCGGCGGCGGCGGCGGTCTTGGTGGCGCCTACGGAGGCGGTGGCTCCGAG TACGGCCACGAGGGCCGACCGCACCACGGCGGCGGCGGATCCCAGTACGGCCACGAGACA CGCCCGCACCACGGCGGCGGGGGCGGCGCCCCGCCTGTGAGGCAGCAGACGTACAGGATC TACTGCAAGGCTGGGGAGGACCAGTACAGCCTCGCCTCCCGCGACGGCAAGGTCTGCCTC GTGCGCACGGACCGTGATGACGACGCGCAGCACTGGATCAAGGACATGAAGTACAGCACC AGGGTGAAGGATGAGGAAGGCTACCCTGCCATCGTCCTCGTCAACAAAGCCACTGGAGAG GCTCTCAAGCATTCCCTTGGCCAGTCACACCCTGTTCTTCTGACCCGCCATAATCCAGAC TCCCTGGACGAGTCTGTCCTGTGGACAGAGAGCAGGGACGTTGGGGATGGGTTCCGCTGC ATTAGGATGGTCAACAACATCTACCTGAACTTTGATGCTTTACATGGAGACAAGGACCAT GGTGGTGTGCGCGACGGGACGGCCCTTGTGCTGTGGGAGTGGTGCGAGGGAGACAACCAG CGCTGGAAGATTGTTCCCTGGTGA

Peptide Sequence

PEP ID	Zm00001d040190_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:31509737:31513060:-1 gene:Zm00001d040190 transcript:Zm00001d040190_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	MEFPHHHHHHGHRRDDDEDDRRGPPPPVYGGYGQPPPPDPYGRAPVDPDPYGRPPPQSAY GGAGDAYGHSGQGYAPPPAYGAGGGYGNVVHVAHEVGDERPYYGGGGGGLGGAYGGGGSE YGHEGRPHHGGGGSQYGHETRPHHGGGGGAPPVRQQTYRIYCKAGEDQYSLASRDGKVCL VRTDRDDDAQHWIKDMKYSTRVKDEEGYPAIVLVNKATGEALKHSLGQSHPVLLTRHNPD SLDESVLWTESRDVGDGFRCIRMVNNIYLNFDALHGDKDHGGVRDGTALVLWEWCEGDNQ RWKIVPW

Transcript Sequence

Transcript ID	Zm00001d040190_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:31509737:31513060:-1 gene:Zm00001d040190 gene_biotype:protein_coding transcript_biotype:protein_coding description:hydroxyproline-rich glycoprotein family protein
Sequence	GATCCATTTCCCACTCGATCGCCAATAATGGAGTTTCCGCACCACCACCACCACCACGGC CATCGCCGCGACGACGACGAAGACGACCGCAGAGGCCCGCCTCCCCCGGTCTACGGCGGC TACGGCCAGCCACCGCCACCCGACCCGTACGGCCGCGCGCCCGTCGACCCCGATCCGTAC GGTCGACCTCCGCCCCAGTCCGCGTACGGTGGGGCCGGGGACGCCTACGGCCACAGCGGC CAAGGCTACGCGCCCCCGCCGGCCTACGGCGCCGGGGGCGGGTACGGCAACGTCGTCCAC GTCGCGCACGAGGTCGGCGACGAGAGGCCTTACTACGGCGGCGGCGGCGGCGGTCTTGGT GGCGCCTACGGAGGCGGTGGCTCCGAGTACGGCCACGAGGGCCGACCGCACCACGGCGGC GGCGGATCCCAGTACGGCCACGAGACACGCCCGCACCACGGCGGCGGGGGCGGCGCCCCG CCTGTGAGGCAGCAGACGTACAGGATCTACTGCAAGGCTGGGGAGGACCAGTACAGCCTC GCCTCCCGCGACGGCAAGGTCTGCCTCGTGCGCACGGACCGTGATGACGACGCGCAGCAC TGGATCAAGGACATGAAGTACAGCACCAGGGTGAAGGATGAGGAAGGCTACCCTGCCATC GTCCTCGTCAACAAAGCCACTGGAGAGGCTCTCAAGCATTCCCTTGGCCAGTCACACCCT GTTCTTCTGACCCGCCATAATCCAGACTCCCTGGACGAGTCTGTCCTGTGGACAGAGAGC AGGGACGTTGGGGATGGGTTCCGCTGCATTAGGATGGTCAACAACATCTACCTGAACTTT GATGCTTTACATGGAGACAAGGACCATGGTGGTGTGCGCGACGGGACGGCCCTTGTGCTG TGGGAGTGGTGCGAGGGAGACAACCAGCGCTGGAAGATTGTTCCCTGGTGAACAAGGAAA TGTGTGACCGAGCCCGCACCAAGGAGGAGCTCCTGCCGTAATAAGTGAAGTGATTGGTAC TGAAGTTTCTGGAAATAAGAGGCTCTTCTGAGATGCCTGTTTGTGTGAGTATTTGCGTTT CCATTCCGTTTTCATGATAATAAAACGCATTGATTATTAATATATGTAATGTGATGCTAC ACTGAGTGGCAGCGTTGGTATATATTTGTAAGAATTAAGAACCCATTGTTGTTGGACTAA GCGTGACGAGTGATGTACTGATGTATGAACCTTTGCTTGATGCATATGCTCTTCTGCTCC TACCGTGGGCTTCGATGAGTCGATTATATATATGAGTATCATGTTTATAATAGTTCGAGT TATT