Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040169_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:30449625:30452363:1 gene:Zm00001d040169 gene_biotype:protein_coding transcript_biotype:protein_coding description:Os12g0638500 protein
Sequence	ATGGAGGGCAAAACACTAACCCCTGAGGCGGACACGGCCTCCGCGCCCCAAACCCTAGCC GCCGGGGAGCTCGTCTGGGCGAAGCCCTCCCAGCCCCGCCAGCACTGCTGGTGGCCCGCG CGCATGCTCTCCGCGTGCCCCGCCTCCGCCGTCCGCGACGCCCAAGTCTCCTACTTCAGC GACCCCGCCGCCTCCGGCGCGCCGTCCGCCCCTCCTGCGCAAGTCCGGCGCTTCGCCGAT GCCGACGCTGACATGATGGCTTGCGGCAGCACCGCGCGCGGATTCTTCGGGGCCGTCGCG GAGGCCCAGGCGCGTGCCGTCGCGGCCCTGCGCCTCCAGCTCACCTGCGCCTGCGTCCCG CCCCCGCCGCCCGGAGAGGATAGCAGCGTCACCGGAGTCGCCAACCTGGCGCCCGCCGAG TTCCTGGCGGCGCTCCGTGAGGCCGCATTGGACATCTCCTCTGTCGGCCTATTGGACCGC GCCAGGCTCAAGAGCTGGGTCTTCGCGGTCGGGGAGGGGTGGGGTCCACATGGCGCCCAG CACTACCTGCGGCGCCCGCTGGACGACCTTGTGGACAAGATCGATCTTGATGTGCCTGCT GGCGAAGACATAGATGCTGATGATTGGCTTGCCGAGGACCAGCACAAAGCATTGGAGAGG CTGGAGGAGACACCCATGCAGAAGAAGCGCTGTGTCACCAAAGTGATGGACAAACTGGAT ACAAGCAAGAATGAGGGCAAGATTGGCAGCCCTGAACATGTAACCTCAGGAAAGCGAGTG CGGAAGAGGAGTAAGTACCTGTCGCCACCATACACTAACTTGGGTGTGGTTGACAAGATT ATCAAACAGGCTGATCTGCCAAAGGCATTGGTTCCCAAAGCTGCTGCTGATGGCAGCAAC GTGTCACCATTGCCAGGCAGCATTGTTGTGGAAGATGTCTTGCTGCTGGTGCGAGGCTTA GGGAAGGTTCCCAAGCATAGGGACGATTTTCCAAAGGATGCTGAGGAATTTCTCCGTTTG TTTAGAAGCACAACATTTGTTCACGGTGCTGACTATAAGTCTTGTAAGGCACATGAATGT CCACTCATGCATGGCTCTAGAAATGTTGACATGGACATTGCTGTGGGTCTAATCTCTGAT TCACATGCTGTTCTGAAACAAGCCAGTTGTGTGTCAAAGAGGGGCAGGAAAAAGGATGAA ACTGGGAGTGGTGGCTCTTCCATCAAGAGGAAGAAGCGAGAGAATACCTCTTCTGCTGCT ACAATTAGCACTAGTATACCAATCACTCCTGCTATTCCTATCAGGCAAGTGAAAGAAGAA GATATGAGAACCCTAATGAAGGCGGGAAGTGGTCCAAGGGGCATAGAAGTAGATGTTCAG AACGAGAAGGGCAAACCATCACCTTTGGAAGTTCCTATTTCAGCTGCAGATCCTGAAGTA GTGGAATCAGGACATGAAGAGGCCCAAGCAAATGTTCTGGCTGTGGGCAATATGTTTCCT GAACAATCCGCAGAAGAAAATGATGCGGCTAACTTGGAAGCAACAAGGTCAGAAACGAAT GTGCAGAATGTTACTGTAGATGTGTCTATCAGAAGTGTTCAGACAGAAGCAATGGAATTG CAATCTAATAATCCCATAGATGTGAGTGCGCAAAGTGTTGTTGTGGATGTTCCTATTGGA AGTGTTTCTAAGGAAGCAACAGAGCCAGAAACTAGTGTACACAAGGATAAGAATGTGCAA AGTGATGTTTCAGATGTGCCTGACAGAATTGTTTCTAAGGAACCAACAGAGTTGGAAACT GATAATCGCATAAATGAGAATGTACAGAGTGTTGCTGATATGTCTGACAGAAGTGTTTTA AAGGAAGCAACAATGCCTGATGCTGACATTCGCATATATGAAAATCTGCAAAGTGCTGCA AATTTGCCTGCCAGCAGTGGGCTCTCTCCTATGCGTGAAGACATGTCTCAGCCTGTAGAT GGAAATGAAGAGCCTGGGGATGTAGAAGTTTGCACAGTCCAGCGATCTTATGCGTCTCTG CAAGCTAACCTGCCAGAAATGCTTAAGAAAGTTAAAACTAATGGAACAGATATAATCGGT GTGAATCATACACTCAACGATGAGTGTCAAAAGAATGGACAACCTGTCAAGAAAGTGAAG CTACCTGCAGAAGTGGCAAATCATTCCTGTGGTGAAGGTACCAATGGCACTTGGCTGGAC CCTGCTAACCTTACTCCTACGAAAAAGAAGAAACCTGCACAGCACTTCAGCAATCCGGCA GCCGTTATTGTGGAATTTGTACCTGGTGCCACTGTTCCTTCCAGAGAGGAGCTACTCTCC ACATTTGGCAAGCACGGCTACTTGATCGAGTCTCAGACTGATATTTCAGAAGCTACCCGC AGTGCTTGTGTTGTGTTTGGGAAAAGCATTGAAGCCGAGGAGGCGTACAAGAACGGTTGT CAGTACCTTCTTGGTCAGTTTGGGCCTCCGTTTGCTACGCTAAGGCTTGATTTCTCTCCC GTCAAGTTGACTGTGCCTTCACCGTCTCTTGCTTCAAAGCCTCCACTCCGAGATATTAGG AAGAACCTTGAGGATATGATTTCAGCCCGTCGTTCGGCTCTGGCAACCTCATCAGATGGG CAGCTGAATCCTGTTCCAGATAAGCTTCTGGGGGAGATGCAGGGCCTTTTGGCAAACGTT GACAGGATGCTTACTAGGCCGCCTGAGAATGCTCCTTAG

Peptide Sequence

PEP ID	Zm00001d040169_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:30449625:30452363:1 gene:Zm00001d040169 transcript:Zm00001d040169_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Os12g0638500 protein
Sequence	MEGKTLTPEADTASAPQTLAAGELVWAKPSQPRQHCWWPARMLSACPASAVRDAQVSYFS DPAASGAPSAPPAQVRRFADADADMMACGSTARGFFGAVAEAQARAVAALRLQLTCACVP PPPPGEDSSVTGVANLAPAEFLAALREAALDISSVGLLDRARLKSWVFAVGEGWGPHGAQ HYLRRPLDDLVDKIDLDVPAGEDIDADDWLAEDQHKALERLEETPMQKKRCVTKVMDKLD TSKNEGKIGSPEHVTSGKRVRKRSKYLSPPYTNLGVVDKIIKQADLPKALVPKAAADGSN VSPLPGSIVVEDVLLLVRGLGKVPKHRDDFPKDAEEFLRLFRSTTFVHGADYKSCKAHEC PLMHGSRNVDMDIAVGLISDSHAVLKQASCVSKRGRKKDETGSGGSSIKRKKRENTSSAA TISTSIPITPAIPIRQVKEEDMRTLMKAGSGPRGIEVDVQNEKGKPSPLEVPISAADPEV VESGHEEAQANVLAVGNMFPEQSAEENDAANLEATRSETNVQNVTVDVSIRSVQTEAMEL QSNNPIDVSAQSVVVDVPIGSVSKEATEPETSVHKDKNVQSDVSDVPDRIVSKEPTELET DNRINENVQSVADMSDRSVLKEATMPDADIRIYENLQSAANLPASSGLSPMREDMSQPVD GNEEPGDVEVCTVQRSYASLQANLPEMLKKVKTNGTDIIGVNHTLNDECQKNGQPVKKVK LPAEVANHSCGEGTNGTWLDPANLTPTKKKKPAQHFSNPAAVIVEFVPGATVPSREELLS TFGKHGYLIESQTDISEATRSACVVFGKSIEAEEAYKNGCQYLLGQFGPPFATLRLDFSP VKLTVPSPSLASKPPLRDIRKNLEDMISARRSALATSSDGQLNPVPDKLLGEMQGLLANV DRMLTRPPENAP

Transcript Sequence

Transcript ID	Zm00001d040169_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:30449625:30452363:1 gene:Zm00001d040169 gene_biotype:protein_coding transcript_biotype:protein_coding description:Os12g0638500 protein
Sequence	ATGGAGGGCAAAACACTAACCCCTGAGGCGGACACGGCCTCCGCGCCCCAAACCCTAGCC GCCGGGGAGCTCGTCTGGGCGAAGCCCTCCCAGCCCCGCCAGCACTGCTGGTGGCCCGCG CGCATGCTCTCCGCGTGCCCCGCCTCCGCCGTCCGCGACGCCCAAGTCTCCTACTTCAGC GACCCCGCCGCCTCCGGCGCGCCGTCCGCCCCTCCTGCGCAAGTCCGGCGCTTCGCCGAT GCCGACGCTGACATGATGGCTTGCGGCAGCACCGCGCGCGGATTCTTCGGGGCCGTCGCG GAGGCCCAGGCGCGTGCCGTCGCGGCCCTGCGCCTCCAGCTCACCTGCGCCTGCGTCCCG CCCCCGCCGCCCGGAGAGGATAGCAGCGTCACCGGAGTCGCCAACCTGGCGCCCGCCGAG TTCCTGGCGGCGCTCCGTGAGGCCGCATTGGACATCTCCTCTGTCGGCCTATTGGACCGC GCCAGGCTCAAGAGCTGGGTCTTCGCGGTCGGGGAGGGGTGGGGTCCACATGGCGCCCAG CACTACCTGCGGCGCCCGCTGGACGACCTTGTGGACAAGATCGATCTTGATGTGCCTGCT GGCGAAGACATAGATGCTGATGATTGGCTTGCCGAGGACCAGCACAAAGCATTGGAGAGG CTGGAGGAGACACCCATGCAGAAGAAGCGCTGTGTCACCAAAGTGATGGACAAACTGGAT ACAAGCAAGAATGAGGGCAAGATTGGCAGCCCTGAACATGTAACCTCAGGAAAGCGAGTG CGGAAGAGGAGTAAGTACCTGTCGCCACCATACACTAACTTGGGTGTGGTTGACAAGATT ATCAAACAGGCTGATCTGCCAAAGGCATTGGTTCCCAAAGCTGCTGCTGATGGCAGCAAC GTGTCACCATTGCCAGGCAGCATTGTTGTGGAAGATGTCTTGCTGCTGGTGCGAGGCTTA GGGAAGGTTCCCAAGCATAGGGACGATTTTCCAAAGGATGCTGAGGAATTTCTCCGTTTG TTTAGAAGCACAACATTTGTTCACGGTGCTGACTATAAGTCTTGTAAGGCACATGAATGT CCACTCATGCATGGCTCTAGAAATGTTGACATGGACATTGCTGTGGGTCTAATCTCTGAT TCACATGCTGTTCTGAAACAAGCCAGTTGTGTGTCAAAGAGGGGCAGGAAAAAGGATGAA ACTGGGAGTGGTGGCTCTTCCATCAAGAGGAAGAAGCGAGAGAATACCTCTTCTGCTGCT ACAATTAGCACTAGTATACCAATCACTCCTGCTATTCCTATCAGGCAAGTGAAAGAAGAA GATATGAGAACCCTAATGAAGGCGGGAAGTGGTCCAAGGGGCATAGAAGTAGATGTTCAG AACGAGAAGGGCAAACCATCACCTTTGGAAGTTCCTATTTCAGCTGCAGATCCTGAAGTA GTGGAATCAGGACATGAAGAGGCCCAAGCAAATGTTCTGGCTGTGGGCAATATGTTTCCT GAACAATCCGCAGAAGAAAATGATGCGGCTAACTTGGAAGCAACAAGGTCAGAAACGAAT GTGCAGAATGTTACTGTAGATGTGTCTATCAGAAGTGTTCAGACAGAAGCAATGGAATTG CAATCTAATAATCCCATAGATGTGAGTGCGCAAAGTGTTGTTGTGGATGTTCCTATTGGA AGTGTTTCTAAGGAAGCAACAGAGCCAGAAACTAGTGTACACAAGGATAAGAATGTGCAA AGTGATGTTTCAGATGTGCCTGACAGAATTGTTTCTAAGGAACCAACAGAGTTGGAAACT GATAATCGCATAAATGAGAATGTACAGAGTGTTGCTGATATGTCTGACAGAAGTGTTTTA AAGGAAGCAACAATGCCTGATGCTGACATTCGCATATATGAAAATCTGCAAAGTGCTGCA AATTTGCCTGCCAGCAGTGGGCTCTCTCCTATGCGTGAAGACATGTCTCAGCCTGTAGAT GGAAATGAAGAGCCTGGGGATGTAGAAGTTTGCACAGTCCAGCGATCTTATGCGTCTCTG CAAGCTAACCTGCCAGAAATGCTTAAGAAAGTTAAAACTAATGGAACAGATATAATCGGT GTGAATCATACACTCAACGATGAGTGTCAAAAGAATGGACAACCTGTCAAGAAAGTGAAG CTACCTGCAGAAGTGGCAAATCATTCCTGTGGTGAAGGTACCAATGGCACTTGGCTGGAC CCTGCTAACCTTACTCCTACGAAAAAGAAGAAACCTGCACAGCACTTCAGCAATCCGGCA GCCGTTATTGTGGAATTTGTACCTGGTGCCACTGTTCCTTCCAGAGAGGAGCTACTCTCC ACATTTGGCAAGCACGGCTACTTGATCGAGTCTCAGACTGATATTTCAGAAGCTACCCGC AGTGCTTGTGTTGTGTTTGGGAAAAGCATTGAAGCCGAGGAGGCGTACAAGAACGGTTGT CAGTACCTTCTTGGTCAGTTTGGGCCTCCGTTTGCTACGCTAAGGCTTGATTTCTCTCCC GTCAAGTTGACTGTGCCTTCACCGTCTCTTGCTTCAAAGCCTCCACTCCGAGATATTAGG AAGAACCTTGAGGATATGATTTCAGCCCGTCGTTCGGCTCTGGCAACCTCATCAGATGGG CAGCTGAATCCTGTTCCAGATAAGCTTCTGGGGGAGATGCAGGGCCTTTTGGCAAACGTT GACAGGATGCTTACTAGGCCGCCTGAGAATGCTCCTTAG