Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040154_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:29437444:29458737:-1 gene:Zm00001d040154 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACCGCCTCGCCGACGGCCTTGCCGCGGCATCCCTTTCCGACCCAGCGGACCAGAGC
GCCGCCACCGCTGGTTTGCCTAGCGCCGATTACCTCCTCAGCGTCATGCGCGCCGTAGAG
GGCGCCGACGCCACCATCCGCACCCAGTTGGAAGAGAATAGCCGTCTCAAGGAAGAATTG
ATGAGGAAAACACAACAGCTACAGAGGATGAGGGAAGATGCTACATCCCAAAGTTCTTTC
AGTGGACTAGGTCAAGAGCGCAATTCTGTTTCTAATAAAATGGATGGCTCTAGCTCTTCA
GTAAATCCTCAAAGTACCTTGATCCATCCTCAGAATGGATGTTGTGAGAGTAGAGAGCAT
CTGATTGATGAAAGCTCAAAACAAAAATACCTTGACAGTCCCCAGGCAAATGGAGCATTT
AAAAGATCATTAGGCGAACAAACTGCTGTTGATAGTGGTGGCCCATCACAATTCTCTACT
CCCTCATCTCGGTCCCATTCTCCAAATAGACATAGAAAAGATGGAGATTATGATTCTAGA
TTATTACCAGTTTCAGAGATGAACTCGAACATATCCTGGAAGCAGGACCTTACTGTTAAG
GTCAAAGAAGGGGAAGAAGAGATTGCACAATTAAGAAAACATCTTGCTGATTACTCTGTG
AAGGAAGCTCAAATACTCGATGATAAATACAAGTTAGAAAAACGGATTGCTTATATGCGT
ATGGCATTTGACCAGCAGCAGCATGATTTAATTGATGCAGCTTCAAAAGCTTTGTCATAC
AGGCAAGATATTATTGAGGAAAACATTCGTCTCACGTATGCGTTGCAGGCAGCCCAACAA
GAAAGATCAATTTTCTTATCTTCTTTGCTTCCTCTTCTGTCCGAATATGATGATCTCCAG
CCTTCAGTTCTTGATGCTCAGTCAATTGTTAGTAATTTAAAGGAACGACTTATTGTTACT
GAGGACAGATTAAGGGAGTCTCGATACCAGATTACTCCATGGCATACTGAATTGTCGAAT
AATACCAGCAATCCTGTGTCTACTAATCCTCCTGCTGGAAAAGCATTGGTGACTACAAGC
AAAAGCAGCCTTGATATTGTCTCCCAGATGGTGTATCCTCACGTACAATCCCCAATGTCT
TCCCCTGTTCAAGCTAGAGGTGATTGGGGTGCATTTGGTAACAAAAACCATCAAGATATT
TCAAATGAGGTTCCTATAAGAAATGCTGGACATGATGACAAGGGAGGGACCTCTCTTTCA
AGCAGAAGCCAATATAGGACTGATGTTCCTCCTCAAGTATCTCAAGGTGATTCCAGTGCT
GTCCATTTTGACTTTGAGACTCAGAGTCAAAACCCACCATTCAAGGGTCTTAGCAGAAAT
GATGTACTGGATGGTTCAGATAGTGCTGAAGCCCAAAACACACAAGAACCTTCTACTCGA
TGGGGTCTAGGGGACTCATCTAATTTGGCATCTGGCCTTGAGGATGCAAACCCTTCATAT
CCTTATCTTCCTACAGTTCTTGAGGAACCTGGTTCTTCTTTCTCCGAAGCTGCAGAGGAT
GATCCATTGCCAGGCATAGAAGGGCTTCGAATCACAGGTGAACCTTTTCCTGGACAAGAA
CTTCAAGCAGGTGGATACTCCATCAATGGTACCACAACTTGTAATTTTGAGTGGGTGCGC
CATTTAGAAGACGGCTCAGTAAATTTCATAGAAGGAGCAAAGCAGCCTAGCTATGTTGTT
ACTGCCGATGATGTGGACACTTTACTCGCCATTGAAGTCCAGCCCCTAGATGATAGGAAA
AGGAAGGAAGTAGGTCTTAGAAAAGGGACCTTACTGTAA

Peptide Sequence

PEP ID

Zm00001d040154_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:29437444:29458737:-1 gene:Zm00001d040154 transcript:Zm00001d040154_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDRLADGLAAASLSDPADQSAATAGLPSADYLLSVMRAVEGADATIRTQLEENSRLKEEL
MRKTQQLQRMREDATSQSSFSGLGQERNSVSNKMDGSSSSVNPQSTLIHPQNGCCESREH
LIDESSKQKYLDSPQANGAFKRSLGEQTAVDSGGPSQFSTPSSRSHSPNRHRKDGDYDSR
LLPVSEMNSNISWKQDLTVKVKEGEEEIAQLRKHLADYSVKEAQILDDKYKLEKRIAYMR
MAFDQQQHDLIDAASKALSYRQDIIEENIRLTYALQAAQQERSIFLSSLLPLLSEYDDLQ
PSVLDAQSIVSNLKERLIVTEDRLRESRYQITPWHTELSNNTSNPVSTNPPAGKALVTTS
KSSLDIVSQMVYPHVQSPMSSPVQARGDWGAFGNKNHQDISNEVPIRNAGHDDKGGTSLS
SRSQYRTDVPPQVSQGDSSAVHFDFETQSQNPPFKGLSRNDVLDGSDSAEAQNTQEPSTR
WGLGDSSNLASGLEDANPSYPYLPTVLEEPGSSFSEAAEDDPLPGIEGLRITGEPFPGQE
LQAGGYSINGTTTCNFEWVRHLEDGSVNFIEGAKQPSYVVTADDVDTLLAIEVQPLDDRK
RKEVGLRKGTLL

Transcript Sequence

Transcript ID

Zm00001d040154_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:29437444:29458737:-1 gene:Zm00001d040154 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGTCGCGTCATCATCTCCGCCGCGCCTGCGCCTTCCAACCCACACCACTCTTCCC
CTCCCCGTCCCTTTCACCACCAAGGTTCCTCCATCCTCCGCGGTGGCTGACCAATTCCAC
CATTCGGCTCCACGTTTATTTTCTAAATAACTGCTACTCCGGATTCCATACTTCGAATTG
ATCCCGTCCTCACGCGGCAGCACCTATCCCCCGCGGGTCGCATCGAGTCCACCACCGCTG
GCGTCGGTTCCTTCCGCGCAATTCCACCGGCAAAAGCAGAGTATACTACCGACTAGAGAA
GAGTTTGGAGTTTGGACCCGCTGCACCCCGAAGTCCCGAACCCTACGCTGGGGGAAGCTC
TCACGTCGCGCCCGCCCATGGACCGCCTCGCCGACGGCCTTGCCGCGGCATCCCTTTCCG
ACCCAGCGGACCAGAGCGCCGCCACCGCTGGTTTGCCTAGCGCCGATTACCTCCTCAGCG
TCATGCGCGCCGTAGAGGGCGCCGACGCCACCATCCGCACCCAGTTGGAAGAGAATAGCC
GTCTCAAGGAAGAATTGATGAGGAAAACACAACAGCTACAGAGGATGAGGGAAGATGCTA
CATCCCAAAGTTCTTTCAGTGGACTAGGTCAAGAGCGCAATTCTGTTTCTAATAAAATGG
ATGGCTCTAGCTCTTCAGTAAATCCTCAAAGTACCTTGATCCATCCTCAGAATGGATGTT
GTGAGAGTAGAGAGCATCTGATTGATGAAAGCTCAAAACAAAAATACCTTGACAGTCCCC
AGGCAAATGGAGCATTTAAAAGATCATTAGGCGAACAAACTGCTGTTGATAGTGGTGGCC
CATCACAATTCTCTACTCCCTCATCTCGGTCCCATTCTCCAAATAGACATAGAAAAGATG
GAGATTATGATTCTAGATTATTACCAGTTTCAGAGATGAACTCGAACATATCCTGGAAGC
AGGACCTTACTGTTAAGGTCAAAGAAGGGGAAGAAGAGATTGCACAATTAAGAAAACATC
TTGCTGATTACTCTGTGAAGGAAGCTCAAATACTCGATGATAAATACAAGTTAGAAAAAC
GGATTGCTTATATGCGTATGGCATTTGACCAGCAGCAGCATGATTTAATTGATGCAGCTT
CAAAAGCTTTGTCATACAGGCAAGATATTATTGAGGAAAACATTCGTCTCACGTATGCGT
TGCAGGCAGCCCAACAAGAAAGATCAATTTTCTTATCTTCTTTGCTTCCTCTTCTGTCCG
AATATGATGATCTCCAGCCTTCAGTTCTTGATGCTCAGTCAATTGTTAGTAATTTAAAGG
AACGACTTATTGTTACTGAGGACAGATTAAGGGAGTCTCGATACCAGATTACTCCATGGC
ATACTGAATTGTCGAATAATACCAGCAATCCTGTGTCTACTAATCCTCCTGCTGGAAAAG
CATTGGTGACTACAAGCAAAAGCAGCCTTGATATTGTCTCCCAGATGGTGTATCCTCACG
TACAATCCCCAATGTCTTCCCCTGTTCAAGCTAGAGGTGATTGGGGTGCATTTGGTAACA
AAAACCATCAAGATATTTCAAATGAGGTTCCTATAAGAAATGCTGGACATGATGACAAGG
GAGGGACCTCTCTTTCAAGCAGAAGCCAATATAGGACTGATGTTCCTCCTCAAGTATCTC
AAGGTGATTCCAGTGCTGTCCATTTTGACTTTGAGACTCAGAGTCAAAACCCACCATTCA
AGGGTCTTAGCAGAAATGATGTACTGGATGGTTCAGATAGTGCTGAAGCCCAAAACACAC
AAGAACCTTCTACTCGATGGGGTCTAGGGGACTCATCTAATTTGGCATCTGGCCTTGAGG
ATGCAAACCCTTCATATCCTTATCTTCCTACAGTTCTTGAGGAACCTGGTTCTTCTTTCT
CCGAAGCTGCAGAGGATGATCCATTGCCAGGCATAGAAGGGCTTCGAATCACAGGTGAAC
CTTTTCCTGGACAAGAACTTCAAGCAGGTGGATACTCCATCAATGGTACCACAACTTGTA
ATTTTGAGTGGGTGCGCCATTTAGAAGACGGCTCAGTAAATTTCATAGAAGGAGCAAAGC
AGCCTAGCTATGTTGTTACTGCCGATGATGTGGACACTTTACTCGCCATTGAAGTCCAGC
CCCTAGATGATAGGAAAAGGAAGGAAGTAGGTCTTAGAAAAGGGACCTTACTGTAA