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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040130_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:28711131:28713722:-1 gene:Zm00001d040130 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:fasciated ear3 description: fasciated ear3
Sequence

ATGAGGCGCGCTCGCGGTCGCCGCGGGCTGCTGCTTCTCCTCGGCGTGGCGCTCTCGGCG
GCTGCGCTGCTCCGTGGCTGCGCGGGGCAGCAAGGGGAGGACGGCTCGGACGCCCCTGCG
GCGGCGGCGGCGGAGACGGCCCCCATGGAGGAGAAGGAGCGCAGGGCGCTGTACGCCGCC
ATCGAGAGCTTCGTCGGCAAGGGGTGGAACGGCTCCGGGCTCTACCCAGACCCCTGCGGC
TGGTCTCCCATCCAGGCGCGTCCCTGCCCTTCCTGCGCTTTCCCTTTCGCATCGATCTAT
GTTACCGTGCTGTTCGATTTTCTGGCCCGCGGGGTGTCATGTGATCTCTTCAATGGCCTG
TGGTACCCAACAGTGATGAGCATTGGCCCAGTCCTTGACAACTCGCTGCAGTGCGGCCCC
GACGCCAAGTTCAGCGCCCAGCTGTTCGACCTGAGGCGCCTCCGGACGCTGTCTTTCTAC
AGCTGCTTCCCGGCGAGCAACCCCACGGCCATCCCGACCGGCAGCTGGGAGAAGCTGGCG
GGGACGCTGGAGACGCTGGAGTTCCGCACCAACCCGGGCCTGAACGGCGCCATCCCGGCG
TCCCTCGGCCGCCTGGCCAGCCTGCAGTCGCTGGTGCTCGTGGAGAACAACCTGACGGGG
CCCGTGCCCGCGGAGCTGGGCGCGCTGTCGAGGCTGAGACGGCTGGTGCTGTCCGGGAAC
GGGCTGTCGGGGCCGATCCCGGTGACACTCGGTAACGACCGCCGCGCCGACGAGCTGCTG
CTGATCGTGGACCTGAGCAGGAACTATCTAACCGGCTCTCTGCCTTCGTCGCTAGGTGGC
CTCACGGGGCTCCTGAAGATGGACCTGAGCAGCAACCTGCTGCAGGGCAGCATCCCGCCG
GAGCTCGCGGGGCTCAGGAGCCTCACGCTGCTGGACCTCAGGAACAACAGCCTCACCGGC
GGGCTGCCCCAGTTCGTGCAGGGCATGGCGTCGCTGCAGGACCTGCTGCTCTCGAACAAC
CCGCTGGGCGGCGGCCTGCCGCAGTCCGGCTGGGGGGCGCTGGCGGGCCTGGCCACGCTG
GACCTGTCCAACGTCGGCCTCGTGGGCGCCATACCGGGGTCCATGGCGGCCCTGACGGGG
CTCCGGTTCCTGGCGCTGGACCACAACCGCCTGACGGGGGCCGTGCCGCCCGAGCTCGCC
CGGCTGCCCAGCATCGGCGCGCTGTACCTGAACGGCAACAACCTGACGGGGACGCTGGAG
TTCTCGGCCGGGTTCTACCAGCGCATGGGGCGGCGGTTCGCGTCGTGGGACAACCCCGGG
CTGTGCTACAACGTCGCGGCCGTGGACGCGGCCCACGCGCCGTCGGGCGTGGTGGTGTGC
AAGGACCTGCAGGAGCCCAGCGTGGGCGGCGGCGCGCGGGACGGGGACGGGGACGGGGAC
GCGGAGGAGGACGGGACGAAGCCCGAGGCGGGCTCCAGCCTCGTGGCCTCCTCGTCGTCC
GGCATGCCGGTTGGCAGTGTCGGTGGGCTCCGGTACCTGGTGGTGGTTCGGGGAATGGCG
GCTGCGGTTCTTGGGTTGGTGTCCCTCCTACAATAG

Peptide Sequence

PEP ID

Zm00001d040130_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:28711131:28713722:-1 gene:Zm00001d040130 transcript:Zm00001d040130_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:fasciated ear3 description: fasciated ear3
Sequence

MRRARGRRGLLLLLGVALSAAALLRGCAGQQGEDGSDAPAAAAAETAPMEEKERRALYAA
IESFVGKGWNGSGLYPDPCGWSPIQARPCPSCAFPFASIYVTVLFDFLARGVSCDLFNGL
WYPTVMSIGPVLDNSLQCGPDAKFSAQLFDLRRLRTLSFYSCFPASNPTAIPTGSWEKLA
GTLETLEFRTNPGLNGAIPASLGRLASLQSLVLVENNLTGPVPAELGALSRLRRLVLSGN
GLSGPIPVTLGNDRRADELLLIVDLSRNYLTGSLPSSLGGLTGLLKMDLSSNLLQGSIPP
ELAGLRSLTLLDLRNNSLTGGLPQFVQGMASLQDLLLSNNPLGGGLPQSGWGALAGLATL
DLSNVGLVGAIPGSMAALTGLRFLALDHNRLTGAVPPELARLPSIGALYLNGNNLTGTLE
FSAGFYQRMGRRFASWDNPGLCYNVAAVDAAHAPSGVVVCKDLQEPSVGGGARDGDGDGD
AEEDGTKPEAGSSLVASSSSGMPVGSVGGLRYLVVVRGMAAAVLGLVSLLQ

Transcript Sequence

Transcript ID

Zm00001d040130_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:28711131:28713722:-1 gene:Zm00001d040130 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:fasciated ear3 description: fasciated ear3
Sequence

ATGAGGCGCGCTCGCGGTCGCCGCGGGCTGCTGCTTCTCCTCGGCGTGGCGCTCTCGGCG
GCTGCGCTGCTCCGTGGCTGCGCGGGGCAGCAAGGGGAGGACGGCTCGGACGCCCCTGCG
GCGGCGGCGGCGGAGACGGCCCCCATGGAGGAGAAGGAGCGCAGGGCGCTGTACGCCGCC
ATCGAGAGCTTCGTCGGCAAGGGGTGGAACGGCTCCGGGCTCTACCCAGACCCCTGCGGC
TGGTCTCCCATCCAGGCGCGTCCCTGCCCTTCCTGCGCTTTCCCTTTCGCATCGATCTAT
GTTACCGTGCTGTTCGATTTTCTGGCCCGCGGGGTGTCATGTGATCTCTTCAATGGCCTG
TGGTACCCAACAGTGATGAGCATTGGCCCAGTCCTTGACAACTCGCTGCAGTGCGGCCCC
GACGCCAAGTTCAGCGCCCAGCTGTTCGACCTGAGGCGCCTCCGGACGCTGTCTTTCTAC
AGCTGCTTCCCGGCGAGCAACCCCACGGCCATCCCGACCGGCAGCTGGGAGAAGCTGGCG
GGGACGCTGGAGACGCTGGAGTTCCGCACCAACCCGGGCCTGAACGGCGCCATCCCGGCG
TCCCTCGGCCGCCTGGCCAGCCTGCAGTCGCTGGTGCTCGTGGAGAACAACCTGACGGGG
CCCGTGCCCGCGGAGCTGGGCGCGCTGTCGAGGCTGAGACGGCTGGTGCTGTCCGGGAAC
GGGCTGTCGGGGCCGATCCCGGTGACACTCGGTAACGACCGCCGCGCCGACGAGCTGCTG
CTGATCGTGGACCTGAGCAGGAACTATCTAACCGGCTCTCTGCCTTCGTCGCTAGGTGGC
CTCACGGGGCTCCTGAAGATGGACCTGAGCAGCAACCTGCTGCAGGGCAGCATCCCGCCG
GAGCTCGCGGGGCTCAGGAGCCTCACGCTGCTGGACCTCAGGAACAACAGCCTCACCGGC
GGGCTGCCCCAGTTCGTGCAGGGCATGGCGTCGCTGCAGGACCTGCTGCTCTCGAACAAC
CCGCTGGGCGGCGGCCTGCCGCAGTCCGGCTGGGGGGCGCTGGCGGGCCTGGCCACGCTG
GACCTGTCCAACGTCGGCCTCGTGGGCGCCATACCGGGGTCCATGGCGGCCCTGACGGGG
CTCCGGTTCCTGGCGCTGGACCACAACCGCCTGACGGGGGCCGTGCCGCCCGAGCTCGCC
CGGCTGCCCAGCATCGGCGCGCTGTACCTGAACGGCAACAACCTGACGGGGACGCTGGAG
TTCTCGGCCGGGTTCTACCAGCGCATGGGGCGGCGGTTCGCGTCGTGGGACAACCCCGGG
CTGTGCTACAACGTCGCGGCCGTGGACGCGGCCCACGCGCCGTCGGGCGTGGTGGTGTGC
AAGGACCTGCAGGAGCCCAGCGTGGGCGGCGGCGCGCGGGACGGGGACGGGGACGGGGAC
GCGGAGGAGGACGGGACGAAGCCCGAGGCGGGCTCCAGCCTCGTGGCCTCCTCGTCGTCC
GGCATGCCGGTTGGCAGTGTCGGTGGGCTCCGGTACCTGGTGGTGGTTCGGGGAATGGCG
GCTGCGGTTCTTGGGTTGGTGTCCCTCCTACAATAG