Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040129_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:28668662:28677463:-1 gene:Zm00001d040129 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoenolpyruvate carboxylase 4
Sequence	ATGTTGGACACGACGGACGACATCGCGGAGGGGATATCATTCCAGGCGTTCGAGGACGAC TGCCGCCTCCTTGCCAGCCTCCTCCACGACGTCCTTCTCCGCGAGCTCGGCCCCCGCTTC ATCAAAATCCTCGAGCGCAACCGCATCCTCGCGCAGAGCGCCGTCTCCATGCGCGCGGCG GGGATGGAGGACACGGCGGCCGTCGTAGAGCGGCAGCTGGAGACCGACCTGGCCGCAATG CCCCTGGAGGACGCGCTCTGCCTGGCCCGGGCCTTCTCCCACTACCTCAACCTCATGGGC ATCGCGGAGACCCACCACAGGGTTCGTAAAGCACGCAACATGGAACAGCTCTCAAAATCA TGTGATGATATATTCAACAAGCTGATTCAAAGTGGTGTCCCTTCAGAACAACTATATGAC ACTGTCTGCAAGCAAGAGGTCGAAATTGTTCTGACAGCTCATCCCACCCAAATAAATCGG CGAACTCTGCAATACAAGCACCTAAGAGTAGCACATCTCTTGGAGTTCAACGGTCGCCCT GATCTAAGCCACGAGGATAAAGAAATGCTAATTGAAGATCTGGTAAGGGAAATCACAGCA ATATGGCAGACGGATGAATTGAGGCGCCATAAACCTACACCAGTTGACGAAGCTAGGGCT GGTCTTCATATTGTGGAGCAATCCCTTTGGAAAGCGGTACCGCACTATCTTCGCCGTGTT AGCAGTGCTCTAAAGAAGCACACCGGAAGCCCACTACCGCTAACCTGCACACCAATCAAG TTTGGTTCTTGGATGGGTGGTGACCGAGATGGGAATCCTAACGTTACAGCAAAAGTGACT AGGGATGTTTCGTTGTTGTCACGGTGGATGGCAATCGACTTATACATCCAGGAATTAGAC AATCTCAGCTTTGAGTTGTCTGTCAATGGATGCAGTGATAAGGTTGCAAGCTTGGCTAAT GACATTTTGCTCAAAGCAGCCGAGGACCTAAAGGCCAATACCTGGAACAAAACAGTACCG CAGAACAATGCAAAGCTTCATAACTTGGCTCTGCCTGCACAACTTCCTTCGGGTGCTGAT CTTCCTTCATGTACAGAATGCAGTGATGGAGAATCTCAATTTAGGATGATAAATCTTCCA AGGAACTCAAATCGTCCGGGGGCTCTTAATTTAACAGAAAAGTTTGAAGACAGTCCATTA TCATCTCCTACTGGTCGTCAATCACACATAGCTAGAACTCCAAGTGGCCGTCAACCAAGG AAATTGTTCAAAGAATCTAATATAGGTCGATCAAGTAGCTTCCAGAAGCTACTTGAGCCA AGCCTATCTGACAGACCGGGAATTACTCCTTACAGGGTTGTCCTTGGTAATTTGAAAGAA AAGCTGGTGAAGACACGCAGAAGGCTTGAGCTTCTGCTTGAGGATCTACCATGTGACTAT GACACTGAAGAATACTGTGAAACATCAGATCAACTTCTGGAACCGTTGCTCTTGTGCCAT CAATCTCTGCAATCATGTGGATCTAGCGTGCTAGCTGATGGCCGGTTAGCAGATTTGATA CGAAGGGTTGCAACCTTTGGTATGGTTCTTATGAAGCTCGATGTACGGCAGGAATCTGGT CGTCACACAGAAGCACTTGATTCCGTCACATCCTACTTGGATCTTGGTGTTTATAGTGAG TGGGATGAAGAAAAGAAGCTGGATTTCTTGACTAGAGAGCTGAAAGGGAAGCGCCCTCTA GTGCCCCAAAACATAGAGGTTGCTGCTGATGTGAAAGAAGTTCTGGACACCTTCAAAGTT GCTGCAGAACTAGGGAGTGACTCACTTGGAGCATATGTCATTTCAATGGCCTCAAATGCA AGTGATGTCCTTGCCGTGGAGCTGTTGCAGAAGGATGCAAGACTTGCAGTTAGCGGGGAC CTAGGAAGGCCATGCCCTGGTGGCACGTTAAGAGTTGTTCCCTTGTTCGAGACCGTGAAA GATTTGCAGGCAGCCGGGTCAGCAATCAGGAAGCTACTGTCCATCGACTGGTACAGGGAG CATATCATCAAGAACCACAACGGACACCAGGAGGTAATGGTGGGCTACTCGGACTCCGGC AAGGACGCCGGCCGCTTCACGGCGGCATGGGAGCTGTACAAGGCTCAGGAAGACGTCGTT GCCGCGTGCAACGAGTTCGGGATCAAGGTGACGCTGTTCCATGGCCGTGGCGGCAGCATC GGCCGAGGCGGCGGGCCGACGTACCTGGCCATCCAGTCACAGCCTCCCGGCTCAGTGATG GGCACTCTCCGTTCGACGGAGCAAGGCGAGATGGTGCAGGCCAAGTTCGGCCTTCCGCAG ACGGCCGTGCGTCAGCTGGAGATCTACACGACGGCGGTGCTGCTAGCGACGCTGCGCCCG CCGCATCCGCCGCGCGACGCCAACTGGCGGAACGTGATGGAGGAGATCTCCCGCGTGAGC TGCGCGCACTACCGTTCCACGGTGTACGAGGACCCGGAGTTCATCACCTACTTCCATGAG GCGACGCCCCAGGCGGAGCTGGGGCACCTGAACATCGGGAGCCGGCCCGCGAAGCGGAAG CCCGCGGGCGGCATCTCGAGCCTGCGCGCCATCCCCTGGGTGTTCGCCTGGACGCAGACG CGGCTGGTGCTCCCCGCGTGGCTGGGCGTCGGCACAGGGCTGCAGGACGCGCTGGACCGG GGCCACGGCGAGGAGCTCCGCGCCATGTACGCGGAGTGGCCCTTCTTCCAGAGCACGTTG GACCTGATCGAGATGGTGACGGCGAAGGCGGACGCGCCCATGGCGGCGCACTACGAGGAG ATGCTCGTGGCGCGGGAGCGGCGCGGCGTGGGCGCCGGGCTGCGGCGTGAGCTTGCGCGC ACGGAGCGGTGCGTGCTGGCGGTGAGCGGCCACAGCAAGCTGACGGCGCACAACCGGAGC CTGCGGCGGCTGATCGAGAGCCGGCTCGCGTACCTCAACCCCATCAACATGCTTCAGGTG GAGGTGCTCCGCAGGCTCCGCCGCGACGACGACAACCGCAGGCTCCGCGACGCGCTGCTC ATCACCATCAACGGCATCGCCGCCGGCATGCGCAACACCGGCTGA

Peptide Sequence

PEP ID	Zm00001d040129_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:28668662:28677463:-1 gene:Zm00001d040129 transcript:Zm00001d040129_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoenolpyruvate carboxylase 4
Sequence	MLDTTDDIAEGISFQAFEDDCRLLASLLHDVLLRELGPRFIKILERNRILAQSAVSMRAA GMEDTAAVVERQLETDLAAMPLEDALCLARAFSHYLNLMGIAETHHRVRKARNMEQLSKS CDDIFNKLIQSGVPSEQLYDTVCKQEVEIVLTAHPTQINRRTLQYKHLRVAHLLEFNGRP DLSHEDKEMLIEDLVREITAIWQTDELRRHKPTPVDEARAGLHIVEQSLWKAVPHYLRRV SSALKKHTGSPLPLTCTPIKFGSWMGGDRDGNPNVTAKVTRDVSLLSRWMAIDLYIQELD NLSFELSVNGCSDKVASLANDILLKAAEDLKANTWNKTVPQNNAKLHNLALPAQLPSGAD LPSCTECSDGESQFRMINLPRNSNRPGALNLTEKFEDSPLSSPTGRQSHIARTPSGRQPR KLFKESNIGRSSSFQKLLEPSLSDRPGITPYRVVLGNLKEKLVKTRRRLELLLEDLPCDY DTEEYCETSDQLLEPLLLCHQSLQSCGSSVLADGRLADLIRRVATFGMVLMKLDVRQESG RHTEALDSVTSYLDLGVYSEWDEEKKLDFLTRELKGKRPLVPQNIEVAADVKEVLDTFKV AAELGSDSLGAYVISMASNASDVLAVELLQKDARLAVSGDLGRPCPGGTLRVVPLFETVK DLQAAGSAIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVV AACNEFGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQ TAVRQLEIYTTAVLLATLRPPHPPRDANWRNVMEEISRVSCAHYRSTVYEDPEFITYFHE ATPQAELGHLNIGSRPAKRKPAGGISSLRAIPWVFAWTQTRLVLPAWLGVGTGLQDALDR GHGEELRAMYAEWPFFQSTLDLIEMVTAKADAPMAAHYEEMLVARERRGVGAGLRRELAR TERCVLAVSGHSKLTAHNRSLRRLIESRLAYLNPINMLQVEVLRRLRRDDDNRRLRDALL ITINGIAAGMRNTG

Transcript Sequence

Transcript ID	Zm00001d040129_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:28668662:28677463:-1 gene:Zm00001d040129 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoenolpyruvate carboxylase 4
Sequence	ACACACACACAACGAACACACAGTTTCATCTCGCTTCCTCTCTATCTCTCTGTCGATCAA TTCATTGCCCATCGATCGATCTCGAGCAAGAGGAACAAGGAAAATAGGAGTACTAGGGGA TCGATCAGGATGTTGGACACGACGGACGACATCGCGGAGGGGATATCATTCCAGGCGTTC GAGGACGACTGCCGCCTCCTTGCCAGCCTCCTCCACGACGTCCTTCTCCGCGAGCTCGGC CCCCGCTTCATCAAAATCCTCGAGCGCAACCGCATCCTCGCGCAGAGCGCCGTCTCCATG CGCGCGGCGGGGATGGAGGACACGGCGGCCGTCGTAGAGCGGCAGCTGGAGACCGACCTG GCCGCAATGCCCCTGGAGGACGCGCTCTGCCTGGCCCGGGCCTTCTCCCACTACCTCAAC CTCATGGGCATCGCGGAGACCCACCACAGGGTTCGTAAAGCACGCAACATGGAACAGCTC TCAAAATCATGTGATGATATATTCAACAAGCTGATTCAAAGTGGTGTCCCTTCAGAACAA CTATATGACACTGTCTGCAAGCAAGAGGTCGAAATTGTTCTGACAGCTCATCCCACCCAA ATAAATCGGCGAACTCTGCAATACAAGCACCTAAGAGTAGCACATCTCTTGGAGTTCAAC GGTCGCCCTGATCTAAGCCACGAGGATAAAGAAATGCTAATTGAAGATCTGGTAAGGGAA ATCACAGCAATATGGCAGACGGATGAATTGAGGCGCCATAAACCTACACCAGTTGACGAA GCTAGGGCTGGTCTTCATATTGTGGAGCAATCCCTTTGGAAAGCGGTACCGCACTATCTT CGCCGTGTTAGCAGTGCTCTAAAGAAGCACACCGGAAGCCCACTACCGCTAACCTGCACA CCAATCAAGTTTGGTTCTTGGATGGGTGGTGACCGAGATGGGAATCCTAACGTTACAGCA AAAGTGACTAGGGATGTTTCGTTGTTGTCACGGTGGATGGCAATCGACTTATACATCCAG GAATTAGACAATCTCAGCTTTGAGTTGTCTGTCAATGGATGCAGTGATAAGGTTGCAAGC TTGGCTAATGACATTTTGCTCAAAGCAGCCGAGGACCTAAAGGCCAATACCTGGAACAAA ACAGTACCGCAGAACAATGCAAAGCTTCATAACTTGGCTCTGCCTGCACAACTTCCTTCG GGTGCTGATCTTCCTTCATGTACAGAATGCAGTGATGGAGAATCTCAATTTAGGATGATA AATCTTCCAAGGAACTCAAATCGTCCGGGGGCTCTTAATTTAACAGAAAAGTTTGAAGAC AGTCCATTATCATCTCCTACTGGTCGTCAATCACACATAGCTAGAACTCCAAGTGGCCGT CAACCAAGGAAATTGTTCAAAGAATCTAATATAGGTCGATCAAGTAGCTTCCAGAAGCTA CTTGAGCCAAGCCTATCTGACAGACCGGGAATTACTCCTTACAGGGTTGTCCTTGGTAAT TTGAAAGAAAAGCTGGTGAAGACACGCAGAAGGCTTGAGCTTCTGCTTGAGGATCTACCA TGTGACTATGACACTGAAGAATACTGTGAAACATCAGATCAACTTCTGGAACCGTTGCTC TTGTGCCATCAATCTCTGCAATCATGTGGATCTAGCGTGCTAGCTGATGGCCGGTTAGCA GATTTGATACGAAGGGTTGCAACCTTTGGTATGGTTCTTATGAAGCTCGATGTACGGCAG GAATCTGGTCGTCACACAGAAGCACTTGATTCCGTCACATCCTACTTGGATCTTGGTGTT TATAGTGAGTGGGATGAAGAAAAGAAGCTGGATTTCTTGACTAGAGAGCTGAAAGGGAAG CGCCCTCTAGTGCCCCAAAACATAGAGGTTGCTGCTGATGTGAAAGAAGTTCTGGACACC TTCAAAGTTGCTGCAGAACTAGGGAGTGACTCACTTGGAGCATATGTCATTTCAATGGCC TCAAATGCAAGTGATGTCCTTGCCGTGGAGCTGTTGCAGAAGGATGCAAGACTTGCAGTT AGCGGGGACCTAGGAAGGCCATGCCCTGGTGGCACGTTAAGAGTTGTTCCCTTGTTCGAG ACCGTGAAAGATTTGCAGGCAGCCGGGTCAGCAATCAGGAAGCTACTGTCCATCGACTGG TACAGGGAGCATATCATCAAGAACCACAACGGACACCAGGAGGTAATGGTGGGCTACTCG GACTCCGGCAAGGACGCCGGCCGCTTCACGGCGGCATGGGAGCTGTACAAGGCTCAGGAA GACGTCGTTGCCGCGTGCAACGAGTTCGGGATCAAGGTGACGCTGTTCCATGGCCGTGGC GGCAGCATCGGCCGAGGCGGCGGGCCGACGTACCTGGCCATCCAGTCACAGCCTCCCGGC TCAGTGATGGGCACTCTCCGTTCGACGGAGCAAGGCGAGATGGTGCAGGCCAAGTTCGGC CTTCCGCAGACGGCCGTGCGTCAGCTGGAGATCTACACGACGGCGGTGCTGCTAGCGACG CTGCGCCCGCCGCATCCGCCGCGCGACGCCAACTGGCGGAACGTGATGGAGGAGATCTCC CGCGTGAGCTGCGCGCACTACCGTTCCACGGTGTACGAGGACCCGGAGTTCATCACCTAC TTCCATGAGGCGACGCCCCAGGCGGAGCTGGGGCACCTGAACATCGGGAGCCGGCCCGCG AAGCGGAAGCCCGCGGGCGGCATCTCGAGCCTGCGCGCCATCCCCTGGGTGTTCGCCTGG ACGCAGACGCGGCTGGTGCTCCCCGCGTGGCTGGGCGTCGGCACAGGGCTGCAGGACGCG CTGGACCGGGGCCACGGCGAGGAGCTCCGCGCCATGTACGCGGAGTGGCCCTTCTTCCAG AGCACGTTGGACCTGATCGAGATGGTGACGGCGAAGGCGGACGCGCCCATGGCGGCGCAC TACGAGGAGATGCTCGTGGCGCGGGAGCGGCGCGGCGTGGGCGCCGGGCTGCGGCGTGAG CTTGCGCGCACGGAGCGGTGCGTGCTGGCGGTGAGCGGCCACAGCAAGCTGACGGCGCAC AACCGGAGCCTGCGGCGGCTGATCGAGAGCCGGCTCGCGTACCTCAACCCCATCAACATG CTTCAGGTGGAGGTGCTCCGCAGGCTCCGCCGCGACGACGACAACCGCAGGCTCCGCGAC GCGCTGCTCATCACCATCAACGGCATCGCCGCCGGCATGCGCAACACCGGCTGACAGCTG AGTGCTGGTGACCGCGGCTTCCTGCCTCGTTGGCTCGTTGTTTGATCAACCGAGAAGCCG CCATTTTGGACTTCGTCGTGAGCTCAACTGACAGCTTTGGTTTTTCTTTTCTTTCGTGAA CGGCCCCACCCAGAGACCAGAGTCGCATTTTTTTTGCTGCTCGATCGTCTGCGTCTAAAT AATTTTAAGTCTTGTTCGTGGAAATATTTTTGCGCGTCTGTTGCGGTCAACTGTTTCATG CGCGCGGCAAGGGTGGAGCGTGGAGTTGATTGATGCGCGCCGACACGGCGACACGGCCGT TGCTGGAGCCTGTGTGCGCGAGAAATCCCGTGGGCCACCACCGGTGCAGACGGCGACGCG GTTACGTTTACGTGAGCCCTTGATTCCAGGGAGCAAGGAGACGAGACCCACCGACCAGCT GCCCCAGCAGTCGTCTCGTCCGTCGGTGGCTCGGTGCACGCGGCTGCGTGCGCCTCGTCC CATCGCGGCGCAACGGATAGCAATCCGCAACCATGGGCCATGGCCACGGTGGACTGACTG TACTTACTCCTATCGACCTATCCTATTATATACAGTTTGCCCTTGGCTACGCTACGCTTA CGTTGCTAATTTGTTTACTTGTAGCAGTATTACGTATACTTATTTTT