Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040082_T026
CDS Infomation

cds chromosome:B73_RefGen_v4:3:26320236:26342662:-1 gene:Zm00001d040082 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH3
Sequence

ATGCTTCTTCGTAATGATGATGAACAAGAGATTATCTCAAGGGAAAGAAAGGATAGGCGA
GATTTTGAACAACTCGCCCAATTGGCTGACAGAATGCGCTTGCACAGCCGTCAGTATTCT
AGAGTTGTTGTGTTCAGTAAGGTTCCATTGCCTAATTATAGATCAGATCTTGATGATAAA
AGACCCCAAAGAGAGGTATCTATACCTGCTGGCTTGCAAAGAGAGGTTGATGCTCTGCTT
GCAGGCTATGTTGCACGGAAGGGAACATACATTGGCAACTTTCCTAGTTCAGCTTTCTCA
CGATCAAGCAGCACAGACAGTTTTGCAACTGATGAAGGCTTCTTTGAGCAGCAAGATAAT
CAAACTTCCACTAGTGCTGTAATGGACAGAATCCAAAGAAGGAAAAGCCTGCAGTTGCGG
AATCAGCAGGCTGCTTGGCAGGAATCAAATGATGGCCAAAGCATGATGGAGTTTCGTCGC
AGTCTTCCTGCTTATAAAGAGAAGCAAACTTTATTGGAAGCTATATCACAGAATCAGGTC
ATTGTAGTTTCAGGCGAGACTGGCTGTGGTAAGACGACACAACTACCACAGTACATTTTA
GAATCTGAAATCGATGCTGCTCGTGGTGCTACGTGCAGTATTATTTGCACTCAACCAAGG
CGAATATCAGCAATTGCTGTGTCTGAAAGAGTCGCTGCTGAAAGAGGCGAGAAAATTGGT
GAATCGGTTGGCTACAAAGTTCGGCTGGAAGGCATGAGAGGAAGAGATACGCGCCTTCTT
TTCTGCACCACTGGAGTCCTGTTGCGGAGATTGTTGGTGGACAGGAATTTGAAAGGTGTT
ACCCATGTTATTGTTGATGAAATCCATGAAAGAGGCATGAATGAAGATTTTCTTCTTATT
GTCTTAAAGGATCTTCTTCCACGTCGCCCTGAGCTGAGGCTTATATTGATGAGTGCAACC
CTTAATGCTGAGCTATTCTCTTCATACTTTGGTGGAGCACCCATGATACATATACCTGGT
TTTACATATCCTGTCCGGAGTCATTTTCTGGAAGATATTCTTGAAATTACTGGGCACTGG
TTAACTCCATACAATCAAATTGATGACTATGGTCAAGAAAAAAGTTGGAAGATGCAAAAG
CAAGCTCTACAAAAGCGGAAGAGCCAAATCGCTTCTGTTGTGGAAGATGCTGTTGAAGCT
GCTGATTTGAGGGACTATAGTTCGCGAACTCGTGATTCCTTATCCTGTTGGAATCCTGAT
TCAATTGGTTTTAATTTAATAGAAAATGTCTTATGCCATATTTGTCAAAAGGAACGATCT
GGTGCAATTCTTGTATTTATGACTGGGTGGGATGACATTAATGCATTAAAAGAGCAGCTC
CAAGCAAATCCATTGCTTGGAAATCCAAGCGCAGTTTTGTTGCTCGCTTGTCATGGCTCT
ATGGCCAGTTCAGAGCAGAAATTAATATTTGATAAGCCTGAGCCTGGAGTAAGGAAAATA
GTTCTTGCCACGAATTTGGCTGAAACTAGTATTACTATCAACGATGTAGTTTTTGTTGTT
GATTGTGGCAAAGCAAAAGAGACATCTTACGATGCACTGAATAATACTCCCTGTCTGCTT
CCAACCTGGATCTCCAAGGCTTCTGCCAGACAAAGACGAGGACGAGCTGGCCGAGTCCAA
CCAGGGGAGTGCTACCATCTTTATCCACGATGTGTATATGATGCATTTGCTGACTACCAG
TTACCAGAACTTCTTAGAACTCCTCTCCAGTCCCTCTGTTTGCAAATAAAAAGCTTGAGG
CTGGGAAGTATATCAGAATTTTTATCCAGAGCTTTACAATCACCTGAATCTCTATCAGTA
CAAAATGCCATTGAATATCTTAAAGTCATTGGAGCATTTGATCAGAATGAAGAATTGACG
GTTCTTGGAAAGCACTTGTCTATGCTTCCAGTTGAACCTAAGTTAGGAAAGATGCTTATT
TTTGGGGCTATTTTTAATTGTCTGGATCCCATATTAACCATAGTTTCTGGACTTAGTGTT
AGAGATCCCTTTTTAACCCCCTTCGATAAGAAAGATCTTGCAGAGTCAGCTAAGTTGCAG
TTTTCATGCCGGGACTACAGTGATCATCTTGCACTTGTTCGTGCATATGATGGATGGAGG
GAGGCTGAAAGAGACCGTGCTGGTTATGACTACTGCTGGAAAAATTTTCTTTCGGTGCAA
ACATTGAAAGCAATAGATTCTCTTCGGCGGCAGTTTCTCTTTCTTCTGAAGGATACTGGT
TTGGTTGACGAAAACATGACTATGTGCAATAAATGGAGTCGTGATGAAAATCTAGTTCGG
GCGGTAATTTGTGCAGGACTGTATCCAGGTGTTTCCTCTGTTTTGAACAAGGAGAAATCC
ATCTCCCTCAAGACAATGGAAGATGGACAGGTTATGCTTTATTCGAGTTCAGTTAATGGT
AAAGAAACCAAGATTCCATTCCCCTGGCTAGTTTTCAATGAGAAGGTGAAAGTGAATTCT
GTTTTCCTCCGGGATTCAACTGCTATATCTGATTCTATACTGTTGTTATTCGGAGGCTGC
ATAAAACAAGGGGGCTTGGATGGACACTTAAAAATGCTTGGAGGTTATCTTGAGTTCTTC
ATGAATCGCGATCTTGCTTCAACTTATCTCCAAAACCCAAGGATGGATATCCAAACGAGT
GAAGAGCTGCTATCAGCCATCCGTTTGCTGGTGACTGAGGATCCATGCAGTGGGCGGTTC
GTGTACGGCCGACAGGAGCCAAGATCAAAGAAAGCAAAGACGATGCTTTCGCCATCCTCT
CTGAGTGAGGCTGGTGGCAACGGAGGGGATAATGCCAAGAACCAGCTCCAGACTTACCTG
ACCCGGGCCGGGCACAGCAACCCCACCTACAAGACGAAGCAGATCAAGAGCTATCTCTTC
AGATCGACGGTTGAGTTCAACGGCATGCAGTTCGTGGGGCAACCGTGTGCAAACAAGAAA
CTTGCGGAGAAAGATGCCGCGAGCGAGGCACTGAACTGGCTCACAGGAGATGGTGGAGCG
ATTACTGACTCTAGGGGGGCTCAGGATGCAGACCCCATGTCCTTGCTGATGCAACCACCG
CGTAGGCGTCGACATAGCCATCGTCGGAGGAACTGA

Peptide Sequence

PEP ID

Zm00001d040082_P026
PEP Infomation

pep chromosome:B73_RefGen_v4:3:26320236:26342662:-1 gene:Zm00001d040082 transcript:Zm00001d040082_T026 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH3
Sequence

MLLRNDDEQEIISRERKDRRDFEQLAQLADRMRLHSRQYSRVVVFSKVPLPNYRSDLDDK
RPQREVSIPAGLQREVDALLAGYVARKGTYIGNFPSSAFSRSSSTDSFATDEGFFEQQDN
QTSTSAVMDRIQRRKSLQLRNQQAAWQESNDGQSMMEFRRSLPAYKEKQTLLEAISQNQV
IVVSGETGCGKTTQLPQYILESEIDAARGATCSIICTQPRRISAIAVSERVAAERGEKIG
ESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLI
VLKDLLPRRPELRLILMSATLNAELFSSYFGGAPMIHIPGFTYPVRSHFLEDILEITGHW
LTPYNQIDDYGQEKSWKMQKQALQKRKSQIASVVEDAVEAADLRDYSSRTRDSLSCWNPD
SIGFNLIENVLCHICQKERSGAILVFMTGWDDINALKEQLQANPLLGNPSAVLLLACHGS
MASSEQKLIFDKPEPGVRKIVLATNLAETSITINDVVFVVDCGKAKETSYDALNNTPCLL
PTWISKASARQRRGRAGRVQPGECYHLYPRCVYDAFADYQLPELLRTPLQSLCLQIKSLR
LGSISEFLSRALQSPESLSVQNAIEYLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLI
FGAIFNCLDPILTIVSGLSVRDPFLTPFDKKDLAESAKLQFSCRDYSDHLALVRAYDGWR
EAERDRAGYDYCWKNFLSVQTLKAIDSLRRQFLFLLKDTGLVDENMTMCNKWSRDENLVR
AVICAGLYPGVSSVLNKEKSISLKTMEDGQVMLYSSSVNGKETKIPFPWLVFNEKVKVNS
VFLRDSTAISDSILLLFGGCIKQGGLDGHLKMLGGYLEFFMNRDLASTYLQNPRMDIQTS
EELLSAIRLLVTEDPCSGRFVYGRQEPRSKKAKTMLSPSSLSEAGGNGGDNAKNQLQTYL
TRAGHSNPTYKTKQIKSYLFRSTVEFNGMQFVGQPCANKKLAEKDAASEALNWLTGDGGA
ITDSRGAQDADPMSLLMQPPRRRRHSHRRRN

Transcript Sequence

Transcript ID

Zm00001d040082_T026
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:26320236:26342662:-1 gene:Zm00001d040082 gene_biotype:protein_coding transcript_biotype:protein_coding description:DExH-box ATP-dependent RNA helicase DExH3
Sequence

CATACGATGATTTCTCTGAGGATGACTCAGATAAGGACATTGACCGCACGTCAGTTTCGA
GCAAGGGTGCATCTACTTTAGATAATGTTGATGAATGGAAATGGAAACTGCATATGCTTC
TTCGTAATGATGATGAACAAGAGATTATCTCAAGGGAAAGAAAGGATAGGCGAGATTTTG
AACAACTCGCCCAATTGGCTGACAGAATGCGCTTGCACAGCCGTCAGTATTCTAGAGTTG
TTGTGTTCAGTAAGGTTCCATTGCCTAATTATAGATCAGATCTTGATGATAAAAGACCCC
AAAGAGAGGTATCTATACCTGCTGGCTTGCAAAGAGAGGTTGATGCTCTGCTTGCAGGCT
ATGTTGCACGGAAGGGAACATACATTGGCAACTTTCCTAGTTCAGCTTTCTCACGATCAA
GCAGCACAGACAGTTTTGCAACTGATGAAGGCTTCTTTGAGCAGCAAGATAATCAAACTT
CCACTAGTGCTGTAATGGACAGAATCCAAAGAAGGAAAAGCCTGCAGTTGCGGAATCAGC
AGGCTGCTTGGCAGGAATCAAATGATGGCCAAAGCATGATGGAGTTTCGTCGCAGTCTTC
CTGCTTATAAAGAGAAGCAAACTTTATTGGAAGCTATATCACAGAATCAGGTCATTGTAG
TTTCAGGCGAGACTGGCTGTGGTAAGACGACACAACTACCACAGTACATTTTAGAATCTG
AAATCGATGCTGCTCGTGGTGCTACGTGCAGTATTATTTGCACTCAACCAAGGCGAATAT
CAGCAATTGCTGTGTCTGAAAGAGTCGCTGCTGAAAGAGGCGAGAAAATTGGTGAATCGG
TTGGCTACAAAGTTCGGCTGGAAGGCATGAGAGGAAGAGATACGCGCCTTCTTTTCTGCA
CCACTGGAGTCCTGTTGCGGAGATTGTTGGTGGACAGGAATTTGAAAGGTGTTACCCATG
TTATTGTTGATGAAATCCATGAAAGAGGCATGAATGAAGATTTTCTTCTTATTGTCTTAA
AGGATCTTCTTCCACGTCGCCCTGAGCTGAGGCTTATATTGATGAGTGCAACCCTTAATG
CTGAGCTATTCTCTTCATACTTTGGTGGAGCACCCATGATACATATACCTGGTTTTACAT
ATCCTGTCCGGAGTCATTTTCTGGAAGATATTCTTGAAATTACTGGGCACTGGTTAACTC
CATACAATCAAATTGATGACTATGGTCAAGAAAAAAGTTGGAAGATGCAAAAGCAAGCTC
TACAAAAGCGGAAGAGCCAAATCGCTTCTGTTGTGGAAGATGCTGTTGAAGCTGCTGATT
TGAGGGACTATAGTTCGCGAACTCGTGATTCCTTATCCTGTTGGAATCCTGATTCAATTG
GTTTTAATTTAATAGAAAATGTCTTATGCCATATTTGTCAAAAGGAACGATCTGGTGCAA
TTCTTGTATTTATGACTGGGTGGGATGACATTAATGCATTAAAAGAGCAGCTCCAAGCAA
ATCCATTGCTTGGAAATCCAAGCGCAGTTTTGTTGCTCGCTTGTCATGGCTCTATGGCCA
GTTCAGAGCAGAAATTAATATTTGATAAGCCTGAGCCTGGAGTAAGGAAAATAGTTCTTG
CCACGAATTTGGCTGAAACTAGTATTACTATCAACGATGTAGTTTTTGTTGTTGATTGTG
GCAAAGCAAAAGAGACATCTTACGATGCACTGAATAATACTCCCTGTCTGCTTCCAACCT
GGATCTCCAAGGCTTCTGCCAGACAAAGACGAGGACGAGCTGGCCGAGTCCAACCAGGGG
AGTGCTACCATCTTTATCCACGATGTGTATATGATGCATTTGCTGACTACCAGTTACCAG
AACTTCTTAGAACTCCTCTCCAGTCCCTCTGTTTGCAAATAAAAAGCTTGAGGCTGGGAA
GTATATCAGAATTTTTATCCAGAGCTTTACAATCACCTGAATCTCTATCAGTACAAAATG
CCATTGAATATCTTAAAGTCATTGGAGCATTTGATCAGAATGAAGAATTGACGGTTCTTG
GAAAGCACTTGTCTATGCTTCCAGTTGAACCTAAGTTAGGAAAGATGCTTATTTTTGGGG
CTATTTTTAATTGTCTGGATCCCATATTAACCATAGTTTCTGGACTTAGTGTTAGAGATC
CCTTTTTAACCCCCTTCGATAAGAAAGATCTTGCAGAGTCAGCTAAGTTGCAGTTTTCAT
GCCGGGACTACAGTGATCATCTTGCACTTGTTCGTGCATATGATGGATGGAGGGAGGCTG
AAAGAGACCGTGCTGGTTATGACTACTGCTGGAAAAATTTTCTTTCGGTGCAAACATTGA
AAGCAATAGATTCTCTTCGGCGGCAGTTTCTCTTTCTTCTGAAGGATACTGGTTTGGTTG
ACGAAAACATGACTATGTGCAATAAATGGAGTCGTGATGAAAATCTAGTTCGGGCGGTAA
TTTGTGCAGGACTGTATCCAGGTGTTTCCTCTGTTTTGAACAAGGAGAAATCCATCTCCC
TCAAGACAATGGAAGATGGACAGGTTATGCTTTATTCGAGTTCAGTTAATGGTAAAGAAA
CCAAGATTCCATTCCCCTGGCTAGTTTTCAATGAGAAGGTGAAAGTGAATTCTGTTTTCC
TCCGGGATTCAACTGCTATATCTGATTCTATACTGTTGTTATTCGGAGGCTGCATAAAAC
AAGGGGGCTTGGATGGACACTTAAAAATGCTTGGAGGTTATCTTGAGTTCTTCATGAATC
GCGATCTTGCTTCAACTTATCTCCAAAACCCAAGGATGGATATCCAAACGAGTGAAGAGC
TGCTATCAGCCATCCGTTTGCTGGTGACTGAGGATCCATGCAGTGGGCGGTTCGTGTACG
GCCGACAGGAGCCAAGATCAAAGAAAGCAAAGACGATGCTTTCGCCATCCTCTCTGAGTG
AGGCTGGTGGCAACGGAGGGGATAATGCCAAGAACCAGCTCCAGACTTACCTGACCCGGG
CCGGGCACAGCAACCCCACCTACAAGACGAAGCAGATCAAGAGCTATCTCTTCAGATCGA
CGGTTGAGTTCAACGGCATGCAGTTCGTGGGGCAACCGTGTGCAAACAAGAAACTTGCGG
AGAAAGATGCCGCGAGCGAGGCACTGAACTGGCTCACAGGAGATGGTGGAGCGATTACTG
ACTCTAGGGGGGCTCAGGATGCAGACCCCATGTCCTTGCTGATGCAACCACCGCGTAGGC
GTCGACATAGCCATCGTCGGAGGAACTGATTAGCACGACATGCTTTTCTTCCTTTTTGAT
CGTTTTCTTATTTATGTAGCATTCGAGAAGCATAGTTAAGCATAGAAGGTAGCGAGGAAA
AAATGTTATAGACTCTTGAAATGTACTACAATAGTTT