Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040061_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:25514772:25518392:1 gene:Zm00001d040061 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carboxylic ester hydrolase

Sequence

ATGGCCACCGAACTCCGGTCGCCGCTCCTCCCGCCGCCACCGCCACAGCGCCGACTAAGC
CCGCGGGCAGCCGCGTGGGCGGCGCTCGCCGTCTCGGCGACGGTCCTGCTCCTCCCCTTC
CTGATCGGCAGCACCACCAGGACCACCAGCAGCAGCAGCACGAGACACCCTCGGCCCCGA
TCCTCCCCACCATCCAACCCCGTGGAGCTGACCCTCCTGACCGGCGCCCGCGACAAGGGC
GCGGTGTGCCTGGACGGGAGCCCCCCGGGCTACCACCTGCAGGCGGGGTCCGGCGCCGGG
TCCGGCAGCTGGCTCATCCATCTCATGGGGGGCGGCTGGTGCGACACCGTCCGCAGCTGC
TCCGACCGCAGGACGACCTACCTCGGCTCGTCCCTCTTCATGCAGAAAGTCATGGACTTC
ACTGGCATTCTCAGCAACGACCCGGCACAGAATCCTGATTTCTACAGCTGGAACAGAGTG
TTCGTTAGGTACTGCGACGGGGCATCGTTTTCGGGGGATTCCCAGCGCGAGGCTGGGCCT
GGGAACGGCACGCTCTTCTTCAGAGGCCTGCGCATCTGGGAGGCAGTCCTCGACGAGCTC
ATGCACAAGGGCCTCGCGCATTCCAAACAGGCCTTGCTCACAGGTTGTTCCGCTGGTGGT
CTGGCCACGCTGCTGCACTGCGACGATTTTCGCGCACGGTTTCCCCCTGAGGTTCCTGTG
AAATGCCTCTCCGATGCCGGGTTCTTTGTTGACGCGAAGGATTTGTCAGGGCAGCGCTCC
ATGCGTTCTGTGTACAGCGGAGTTGTTCATCTTCAGAACGTTACTAAAGTTTTGCCCAAG
GACTGCCTCCTCGCAAACAAGGACGATCCCACGCAGTGTTTCTTCCCGGCGGAGCTTATT
AAGAGCATCAGCACGCCCACGTTGATCGTAAACTCTGCTTACGACTCTTGGCAGGTACGG
TTTGTTGTTGCGCCAGACAGCTCGTCTCCCGACGAGTCATGGCGCGGCTGCAGAGACGAC
GTTCGCAGATGCAATTCCTCCCAGATCCAAGTCCTCAATGCATTTAGGAAGACGATGGTA
GATGACCTCGTCGAGGCTGCCGACGGCACCAACAGCAGCTGGTTCATCGACTCTTGCTTC
ACACATTGTCAGACTATCTTCGACACCTCAGGATGGAACTCAGCGGCCGCGCCGAGGATC
GGAAACAAGACACTGACGGAGGTGATCGGGGACTGGTACTTTGGTAGGAGCCCGAGCCCG
GTGGTGAGGCAGGTTGGCTGCGAGTATCCATGCAACCCTACATGCAACAGTCAGCCACCA
GTTGCTGGCTTCTACAACAAAGCTCTGCCGCCGCGTCAACAAGCAAACATTCTTGTATTG
GGGTGA

Peptide Sequence

PEP ID

Zm00001d040061_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:25514772:25518392:1 gene:Zm00001d040061 transcript:Zm00001d040061_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carboxylic ester hydrolase

Sequence

MATELRSPLLPPPPPQRRLSPRAAAWAALAVSATVLLLPFLIGSTTRTTSSSSTRHPRPR
SSPPSNPVELTLLTGARDKGAVCLDGSPPGYHLQAGSGAGSGSWLIHLMGGGWCDTVRSC
SDRRTTYLGSSLFMQKVMDFTGILSNDPAQNPDFYSWNRVFVRYCDGASFSGDSQREAGP
GNGTLFFRGLRIWEAVLDELMHKGLAHSKQALLTGCSAGGLATLLHCDDFRARFPPEVPV
KCLSDAGFFVDAKDLSGQRSMRSVYSGVVHLQNVTKVLPKDCLLANKDDPTQCFFPAELI
KSISTPTLIVNSAYDSWQVRFVVAPDSSSPDESWRGCRDDVRRCNSSQIQVLNAFRKTMV
DDLVEAADGTNSSWFIDSCFTHCQTIFDTSGWNSAAAPRIGNKTLTEVIGDWYFGRSPSP
VVRQVGCEYPCNPTCNSQPPVAGFYNKALPPRQQANILVLG

Transcript Sequence

Transcript ID

Zm00001d040061_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:25514772:25518392:1 gene:Zm00001d040061 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carboxylic ester hydrolase

Sequence

ACACCATAAACTGCAGTGCTTCCAGAGAGCCTGACCGACCATCCACCAGCAGCTAGCGTA
GCGAGCGATGGCCACCGAACTCCGGTCGCCGCTCCTCCCGCCGCCACCGCCACAGCGCCG
ACTAAGCCCGCGGGCAGCCGCGTGGGCGGCGCTCGCCGTCTCGGCGACGGTCCTGCTCCT
CCCCTTCCTGATCGGCAGCACCACCAGGACCACCAGCAGCAGCAGCACGAGACACCCTCG
GCCCCGATCCTCCCCACCATCCAACCCCGTGGAGCTGACCCTCCTGACCGGCGCCCGCGA
CAAGGGCGCGGTGTGCCTGGACGGGAGCCCCCCGGGCTACCACCTGCAGGCGGGGTCCGG
CGCCGGGTCCGGCAGCTGGCTCATCCATCTCATGGGGGGCGGCTGGTGCGACACCGTCCG
CAGCTGCTCCGACCGCAGGACGACCTACCTCGGCTCGTCCCTCTTCATGCAGAAAGTCAT
GGACTTCACTGGCATTCTCAGCAACGACCCGGCACAGAATCCTGATTTCTACAGCTGGAA
CAGAGTGTTCGTTAGGTACTGCGACGGGGCATCGTTTTCGGGGGATTCCCAGCGCGAGGC
TGGGCCTGGGAACGGCACGCTCTTCTTCAGAGGCCTGCGCATCTGGGAGGCAGTCCTCGA
CGAGCTCATGCACAAGGGCCTCGCGCATTCCAAACAGGCCTTGCTCACAGGTTGTTCCGC
TGGTGGTCTGGCCACGCTGCTGCACTGCGACGATTTTCGCGCACGGTTTCCCCCTGAGGT
TCCTGTGAAATGCCTCTCCGATGCCGGGTTCTTTGTTGACGCGAAGGATTTGTCAGGGCA
GCGCTCCATGCGTTCTGTGTACAGCGGAGTTGTTCATCTTCAGAACGTTACTAAAGTTTT
GCCCAAGGACTGCCTCCTCGCAAACAAGGACGATCCCACGCAGTGTTTCTTCCCGGCGGA
GCTTATTAAGAGCATCAGCACGCCCACGTTGATCGTAAACTCTGCTTACGACTCTTGGCA
GGTACGGTTTGTTGTTGCGCCAGACAGCTCGTCTCCCGACGAGTCATGGCGCGGCTGCAG
AGACGACGTTCGCAGATGCAATTCCTCCCAGATCCAAGTCCTCAATGCATTTAGGAAGAC
GATGGTAGATGACCTCGTCGAGGCTGCCGACGGCACCAACAGCAGCTGGTTCATCGACTC
TTGCTTCACACATTGTCAGACTATCTTCGACACCTCAGGATGGAACTCAGCGGCCGCGCC
GAGGATCGGAAACAAGACACTGACGGAGGTGATCGGGGACTGGTACTTTGGTAGGAGCCC
GAGCCCGGTGGTGAGGCAGGTTGGCTGCGAGTATCCATGCAACCCTACATGCAACAGTCA
GCCACCAGTTGCTGGCTTCTACAACAAAGCTCTGCCGCCGCGTCAACAAGCAAACATTCT
TGTATTGGGGTGAACCATACAAGTAAACGGACAATAATTCTAAAGATAAATATATATAGC
ACACACTGCATGAGAGAACACTGAAAATTGATGGAAAGAAAATTGACGTACGTACGGGCT
CTTGTTGGACCCTGTTAATGATGATAATTAAGAAGTGATGGATGATGATGAGAC