Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040051_T096
CDS Infomation

cds chromosome:B73_RefGen_v4:3:24859166:24872762:-1 gene:Zm00001d040051 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence

ATGTTAGTCAAGCATCTTGAACACAAGAATGTATTGAAACAACCAGATATGAATCTAGAT
ATCATTGAAGTTACTTCACGCCTTGCTGGGCACTCCAAAGCTCAGTCTTCTACAGCACTA
ATGGCTTCAATAAGTGATATGGTCAGGCATATGGGTAAAAGCATGCAATCCTTGGCCAGC
GATGCAGGTCCTGGAGACAACATGGTCAAATGGAATAGCAGATATGGGAAAGCTGTAGAT
GAATGTCTTGTTCAATTGTCTAGAAAGGTCGGTGATGCTGGACCTATCCTTGATACATTA
GCTGTAGTGCTGGAAAACATTTCAAGTTCTATGATTGTTGCACGGTCTACTATCTTTGCA
GCATATCGTACTGCTCAAATAGTTGCATCATTGCCAAACTTGTCACATCAGAGCAAAGCA
TTTCCTGAGGCATTGTTTCACCAACTGCTTTTAGCAATGGTCTATCCGGACTGTGGGACA
CATTTAGGAGCACATCGGATTTTCTCTGTTGTTCTTGTTCCCTCTGCTGTCGCTCCGTGC
TCATTTTCAGACACTTCACGGACAAGGAAGATTGATCTCCGAAGGACATTATCTAGAACA
ACATCAGTGTTTTCATCTTCTGCTGCTTTGTTTGGGAAACTTAAAAGAGACATGCTTTCA
TTTCGTGAAAGTCCGCTCCATGATAATACAAAGCTACTACCCATCAGTGAGGATGCAGAT
GAGATCAGCGCAAATGATGCAAAACTATTCAAGTCACAGACTATTCAAAGGATGGCTAGT
ACAAAAGATATTTCTCTTCCCTCTTCCACAGATGCAAGTACTTTGAGTGAACAAACTCCA
AATCAGGAAAAGGATGCTGTCACCCTTATGCTCAGTGTTCGTCAGGCAAATCTTCTTCTT
TCCTCGTTATGGACTCAGGCACTGTCACCTGAAAATGTTCCACGGAATTATGAAGCAATT
TCTCATACTTACAGCTTGATGCTATTGTTTTCTAGAGCCAAGGGCTCAGGTGCCGACGTT
TTGGTTGGTAGCTTTCAGCTTGCTTTTTCATTAAGAAGTGTTTCGTTACAAGCAGGTTTT
CTTCCACCTTCACGCAGGCGCTCTCTTTTTACTTTGGCAACTTCAATGCTTGTGTTTTTC
TCGAAAGCTTTCAACGTTCCAGCGCTCATTCCAGTTGTGAAGCATGTGTTGACAGAAAGT
ACAGTTGATCCATTTCTTTGTTTAATAGAAGACTGTAGATTGCAGGCTCTTGATAGTGCT
GCTCAGTCTTGCAAACTCTATGGTTCAAAAGAAGATGACGATCAAGCTCTGAAATCACTC
TCGAACATTGACATGAATGAACATCAGTCAAAAGAAACATCAGTGTCTCTTATACTTGAT
AGCTTGGAAGATCTGTCAGAGTCAGAATTGTCTACTATTAGAAAACAGCTGATTGAGGAA
TTTTCAGCAGATGACATTTGTCTGGGATCTCATTTTACTGAAACACCTTCGAAATCTGCA
GCACAAAATGGAAAACTGCACCACAAATCTATGGAGGTTATTCCATTCGGATTTGTTTTT
GAAGATGATACTCTCGTTGAAGCATCTGACAGCTTAGTAGAACCTCACTTGCGACATCTG
CCATGTAACAGCGTTCTTGATGTTGACCGGCTTCTTAATTCGGTTTTGGAAACATCTCAG
CATGTTGGAAGGATGTCAGTTTCAACAGACCAGGATTTGCCTTTCAAGGAGGTAGCCAAC
CAATGTGAAGCACTTCTGATTGGGAAGCAGCAAAAGCTATCTATCTGCATGAGTGTTCGT
GAAAAAAAGGATGGTGAATCATCCATCGAGAAGTCATCTCAGCAGGATCCTCAAGCATAT
ACGTTTCTCTGCACAGCTGATGAACAATGGCACCTCAATTCCTGTAAGCTGCCAGTGCTG
TGTCCCTATGACCGGTTCCTTGCAACGTCTGGGTGCTAA

Peptide Sequence

PEP ID

Zm00001d040051_P096
PEP Infomation

pep chromosome:B73_RefGen_v4:3:24859166:24872762:-1 gene:Zm00001d040051 transcript:Zm00001d040051_T096 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence

MLVKHLEHKNVLKQPDMNLDIIEVTSRLAGHSKAQSSTALMASISDMVRHMGKSMQSLAS
DAGPGDNMVKWNSRYGKAVDECLVQLSRKVGDAGPILDTLAVVLENISSSMIVARSTIFA
AYRTAQIVASLPNLSHQSKAFPEALFHQLLLAMVYPDCGTHLGAHRIFSVVLVPSAVAPC
SFSDTSRTRKIDLRRTLSRTTSVFSSSAALFGKLKRDMLSFRESPLHDNTKLLPISEDAD
EISANDAKLFKSQTIQRMASTKDISLPSSTDASTLSEQTPNQEKDAVTLMLSVRQANLLL
SSLWTQALSPENVPRNYEAISHTYSLMLLFSRAKGSGADVLVGSFQLAFSLRSVSLQAGF
LPPSRRRSLFTLATSMLVFFSKAFNVPALIPVVKHVLTESTVDPFLCLIEDCRLQALDSA
AQSCKLYGSKEDDDQALKSLSNIDMNEHQSKETSVSLILDSLEDLSESELSTIRKQLIEE
FSADDICLGSHFTETPSKSAAQNGKLHHKSMEVIPFGFVFEDDTLVEASDSLVEPHLRHL
PCNSVLDVDRLLNSVLETSQHVGRMSVSTDQDLPFKEVANQCEALLIGKQQKLSICMSVR
EKKDGESSIEKSSQQDPQAYTFLCTADEQWHLNSCKLPVLCPYDRFLATSGC

Transcript Sequence

Transcript ID

Zm00001d040051_T096
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:24859166:24872762:-1 gene:Zm00001d040051 gene_biotype:protein_coding transcript_biotype:protein_coding description:ARM repeat superfamily protein
Sequence

ACTGCATGGTGGTGACCGCTCCCTATGATGCCCACGTGCAATCCGATCTTTGATTGGTAC
TGTTGCTTTGACCGCAGTAGTGGTTTGTCAAGTGGGTCGTGAAATTAGCGCTTGGCAATG
AGCGATAGTGGTTGATTGAGGAGCGTTTGGCATGTTGCAAATGCTGCAATGCAGTAGATG
GCATCGATTTAGGTTTGGTACAAGTGGAGTGGCCCATATGTTGTGCGGAGGAGCACTGGT
GAAGCCTAAGAACCCTTATGTCGATGGGCGTGGTCTCAAGGGAGGTGTTGTCAGCATGCG
AGAGGCTCTGCTTCATTTGCCCGTCACTGCGGACGAGGTCCCGCCATCCGGTCAAGCGCT
ACAAGAAATTGCTTGCAGAAATCTTCCCTCGGACACAGGATGAAGAACCAAATGATCGCA
AGATAGGGAAACTGTGCGAATATATTTCAAGGAATCCTATGCGTGTTCCAAAGGTTTATT
TCTTTTTATGCCTTGCCCGTATAGTTTTATGTGTAACATGAGTTCAATAACGAAAACTGT
TTCCGTTACAGATTACATTTTACTTAGAGCAAAAGTGCTACAAGGAATTAAGGGCTGAGC
GCTATGGTTCAGTGAAAGTTGTTATTGCAATCTATCGAAAGGCCACTTTTTGCCAACAGC
TTGCTAACAATTGTAGAGACATTATTGGAGCAAAATAGACAGGATGACTTGCGGAAATTG
GCATGTCAAACACTTTTTGACTTTATAAATAATCAGGTTGACAGTACTTACATGTTCAAT
TTAGAAAACCAGATTCCTAAACTATGTCATCTGGCCCAAGAGATGGGTGAAAAGGAGAAG
ATATGCATTCTTCATGCAGCTGGGCTACAAGCTCTTTCATCTATGATTTGGTTTATGGGT
GAGCATTCCCATATGTCTGCAGAGCTTGATAATGTTGTTTCTGCAGTTCTGGAAAATTAT
GAGAGCCCATATGCAAATGCTGATAATGATGCCGCTATTGAGGATAGACGAATTCAGTGG
GTGGATGAAGTGCTCAAAGCTGAAGGTCATGAACCTCCTGCTGTTACCATTTTGACAAGG
GTTCCTTCATGGAAAGTTATTAGAACTGTTCACGGTGAATTAAGTTTGACAATAGAAGAA
TCAACAAGTCCAAATTTTTGGTCAGGGATTTGTCTACATAACCTTGCTAGAATATCCAGG
GAAGCAACAACAGTGCGACGAGTTCTGGAAGTTATATTTCGTTATTTTGATAATAACAAT
CTGTGGTCACCTTCTAAAGGATTTGCACTGTGTGTCCTACTGGATATGCAGATTGTCATG
GAGAAATCTGAATGCTCATATATTGTTGTCTATGTTAGTCAAGCATCTTGAACACAAGAA
TGTATTGAAACAACCAGATATGAATCTAGATATCATTGAAGTTACTTCACGCCTTGCTGG
GCACTCCAAAGCTCAGTCTTCTACAGCACTAATGGCTTCAATAAGTGATATGGTCAGGCA
TATGGGTAAAAGCATGCAATCCTTGGCCAGCGATGCAGGTCCTGGAGACAACATGGTCAA
ATGGAATAGCAGATATGGGAAAGCTGTAGATGAATGTCTTGTTCAATTGTCTAGAAAGGT
CGGTGATGCTGGACCTATCCTTGATACATTAGCTGTAGTGCTGGAAAACATTTCAAGTTC
TATGATTGTTGCACGGTCTACTATCTTTGCAGCATATCGTACTGCTCAAATAGTTGCATC
ATTGCCAAACTTGTCACATCAGAGCAAAGCATTTCCTGAGGCATTGTTTCACCAACTGCT
TTTAGCAATGGTCTATCCGGACTGTGGGACACATTTAGGAGCACATCGGATTTTCTCTGT
TGTTCTTGTTCCCTCTGCTGTCGCTCCGTGCTCATTTTCAGACACTTCACGGACAAGGAA
GATTGATCTCCGAAGGACATTATCTAGAACAACATCAGTGTTTTCATCTTCTGCTGCTTT
GTTTGGGAAACTTAAAAGAGACATGCTTTCATTTCGTGAAAGTCCGCTCCATGATAATAC
AAAGCTACTACCCATCAGTGAGGATGCAGATGAGATCAGCGCAAATGATGCAAAACTATT
CAAGTCACAGACTATTCAAAGGATGGCTAGTACAAAAGATATTTCTCTTCCCTCTTCCAC
AGATGCAAGTACTTTGAGTGAACAAACTCCAAATCAGGAAAAGGATGCTGTCACCCTTAT
GCTCAGTGTTCGTCAGGCAAATCTTCTTCTTTCCTCGTTATGGACTCAGGCACTGTCACC
TGAAAATGTTCCACGGAATTATGAAGCAATTTCTCATACTTACAGCTTGATGCTATTGTT
TTCTAGAGCCAAGGGCTCAGGTGCCGACGTTTTGGTTGGTAGCTTTCAGCTTGCTTTTTC
ATTAAGAAGTGTTTCGTTACAAGCAGGTTTTCTTCCACCTTCACGCAGGCGCTCTCTTTT
TACTTTGGCAACTTCAATGCTTGTGTTTTTCTCGAAAGCTTTCAACGTTCCAGCGCTCAT
TCCAGTTGTGAAGCATGTGTTGACAGAAAGTACAGTTGATCCATTTCTTTGTTTAATAGA
AGACTGTAGATTGCAGGCTCTTGATAGTGCTGCTCAGTCTTGCAAACTCTATGGTTCAAA
AGAAGATGACGATCAAGCTCTGAAATCACTCTCGAACATTGACATGAATGAACATCAGTC
AAAAGAAACATCAGTGTCTCTTATACTTGATAGCTTGGAAGATCTGTCAGAGTCAGAATT
GTCTACTATTAGAAAACAGCTGATTGAGGAATTTTCAGCAGATGACATTTGTCTGGGATC
TCATTTTACTGAAACACCTTCGAAATCTGCAGCACAAAATGGAAAACTGCACCACAAATC
TATGGAGGTTATTCCATTCGGATTTGTTTTTGAAGATGATACTCTCGTTGAAGCATCTGA
CAGCTTAGTAGAACCTCACTTGCGACATCTGCCATGTAACAGCGTTCTTGATGTTGACCG
GCTTCTTAATTCGGTTTTGGAAACATCTCAGCATGTTGGAAGGATGTCAGTTTCAACAGA
CCAGGATTTGCCTTTCAAGGAGGTAGCCAACCAATGTGAAGCACTTCTGATTGGGAAGCA
GCAAAAGCTATCTATCTGCATGAGTGTTCGTGAAAAAAAGGATGGTGAATCATCCATCGA
GAAGTCATCTCAGCAGGATCCTCAAGCATATACGTTTCTCTGCACAGCTGATGAACAATG
GCACCTCAATTCCTGTAAGCTGCCAGTGCTGTGTCCCTATGACCGGTTCCTTGCAACGTC
TGGGTGCTAAGATGATCTCTTCTGGTACGCGGACCTTTATAACTATGAATGTGTTCAGTG
GACTCCTAAAAATTGGCGGTTCCAGCTCATGCATGCCAAAATAGGTGC