Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040014_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:22985991:22987942:1 gene:Zm00001d040014 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclease PA3

Sequence

ATGGAGGCCGCCGCAACACTTCCGCCGCTGCTGCTCCTCATCCTCCTTGCTGCGACTGCG
GTGCCGGCTCCGTCGCACGCATGGGGAGTCGACGGCCATCTCATGGTCTGCCAGATCGCA
CAGGCACGCGTGATTCTTTCTCACCACTGCACTATTGTTACAGTCTGCGAATCTGGCCGT
CTGAGTGGCGCGGCGGCCGCGGCGGTGAAGGACCTGCTGCCGTCCTACGCCGGCAACAAC
CTGAGCAGCCTCTGCTCCTGGGCGGACGACGTCAAGTTCAGGTACCCCTGGTCGTCGCCG
CTCCACTACATCGACACCCCCGACGGCCTCTGCACCTACCGCTACGACAGGGACTGCAAG
GACGAGGACGGCGTCGAGGGCCGGTGCGTCGCGGGCGCCATCAACAACTACACCTCCCAG
CTCCTCGCCTACCGGAGATCTTCACCCACTGAGTATAACCTAACGCAAGCGCTCCTCTTC
CTCTCGCACTTCATCGGAGACATACACCAGCCACTTCACGTGGGGTTCACCTCCGACAAA
GGAGGGAACACCATTGACGTCCACTGGTACACAAGGAAGACTGTTCTACACCATGTTTGG
GACGCCAGCATCATCCAGACGGCCGAAGATGACTTCTACGGCGACAGCGTAGCCGGGTAT
ATCGACACCCTGAAGAAAAATATAACGCAGGGAGAATGGTCGGAGCAAGTGTCTAGCTGG
GAAGCGTGCGGTACGAACCAGACTGCATGTCCAGACATATATGCGTCTGAGAGCGTCGCT
GCAGCATGCGACTGGGCGTACAAGGGAGTCGAGGAAGACTCAACCCTAGAAGATCCCTAT
TTCTCCAGCAGGCTGCCGGTAGTCAGCCTGAGGCTAGCGCAAGGCGGCGTCAGATTAGCC
GCCACTCTGAACAGGATTTTTGGATAA

Peptide Sequence

PEP ID

Zm00001d040014_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:22985991:22987942:1 gene:Zm00001d040014 transcript:Zm00001d040014_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclease PA3

Sequence

MEAAATLPPLLLLILLAATAVPAPSHAWGVDGHLMVCQIAQARVILSHHCTIVTVCESGR
LSGAAAAAVKDLLPSYAGNNLSSLCSWADDVKFRYPWSSPLHYIDTPDGLCTYRYDRDCK
DEDGVEGRCVAGAINNYTSQLLAYRRSSPTEYNLTQALLFLSHFIGDIHQPLHVGFTSDK
GGNTIDVHWYTRKTVLHHVWDASIIQTAEDDFYGDSVAGYIDTLKKNITQGEWSEQVSSW
EACGTNQTACPDIYASESVAAACDWAYKGVEEDSTLEDPYFSSRLPVVSLRLAQGGVRLA
ATLNRIFG

Transcript Sequence

Transcript ID

Zm00001d040014_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:22985991:22987942:1 gene:Zm00001d040014 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclease PA3

Sequence

ATGGAGGCCGCCGCAACACTTCCGCCGCTGCTGCTCCTCATCCTCCTTGCTGCGACTGCG
GTGCCGGCTCCGTCGCACGCATGGGGAGTCGACGGCCATCTCATGGTCTGCCAGATCGCA
CAGGCACGCGTGATTCTTTCTCACCACTGCACTATTGTTACAGTCTGCGAATCTGGCCGT
CTGAGTGGCGCGGCGGCCGCGGCGGTGAAGGACCTGCTGCCGTCCTACGCCGGCAACAAC
CTGAGCAGCCTCTGCTCCTGGGCGGACGACGTCAAGTTCAGGTACCCCTGGTCGTCGCCG
CTCCACTACATCGACACCCCCGACGGCCTCTGCACCTACCGCTACGACAGGGACTGCAAG
GACGAGGACGGCGTCGAGGGCCGGTGCGTCGCGGGCGCCATCAACAACTACACCTCCCAG
CTCCTCGCCTACCGGAGATCTTCACCCACTGAGTATAACCTAACGCAAGCGCTCCTCTTC
CTCTCGCACTTCATCGGAGACATACACCAGCCACTTCACGTGGGGTTCACCTCCGACAAA
GGAGGGAACACCATTGACGTCCACTGGTACACAAGGAAGACTGTTCTACACCATGTTTGG
GACGCCAGCATCATCCAGACGGCCGAAGATGACTTCTACGGCGACAGCGTAGCCGGGTAT
ATCGACACCCTGAAGAAAAATATAACGCAGGGAGAATGGTCGGAGCAAGTGTCTAGCTGG
GAAGCGTGCGGTACGAACCAGACTGCATGTCCAGACATATATGCGTCTGAGAGCGTCGCT
GCAGCATGCGACTGGGCGTACAAGGGAGTCGAGGAAGACTCAACCCTAGAAGATCCCTAT
TTCTCCAGCAGGCTGCCGGTAGTCAGCCTGAGGCTAGCGCAAGGCGGCGTCAGATTAGCC
GCCACTCTGAACAGGATTTTTGGATAATGGTGGAGTACATTTACTATACATGGAACTATT
ATGGAATTAAATGATATATATAACTATTGGTTTCTCAGCAAAACTTGTCAAGCAGTGACG
TTTTTCCTTCCTTT