Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039994_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:22276219:22281890:-1 gene:Zm00001d039994 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-xylosidase 1
Sequence

ATGCTGTCTTTTTCTCGTTCGGCCATCCTCTCCTACCTACTGTGGTGTCTTCTATTTCTC
ACATTGGCAAGCAGCAATGGCGCGGTCGCCACAGCAAAGCCGAAGGCTGGGTGCGGGTAC
AAGCTGGTCTCCCTTGTTCAGCTGCCCAACGGGGGAGGCCTTGTGGGTTACCTGCAGGTG
AAGCAGCGCACCTCCACTTATGGTCCTGACATCCCTCGCCTCAGGCTCTTTGTCAAGCAC
GAGACCAGGGAGAGGGTGCGCGTGCAGATTACAGATGCAGATAAGCAGAGGTGGGAGGTC
CCCTACAACCTGCTCCCAAGGGAGCCAGCCCCACCCGTGACCGGCGGCAAGGTCACGGGC
GCCCCCTTCACGGGCGCCGAGTACCCCGGCGAGGAGCTGGTGTTCACCTATGGGCGCGAC
CCGTTCTGGTTCGCGGTGCACCGCCGGTCCACTCGGCAGCCGCTGTTCAACACCAGCGCC
GGCGCGCTGGTGTTCAAGGACCAGTACCTGGAGGTGTCCACGGCGCTGCCCAAGAACGCC
GCCCTGTACGGGCTCGGCGAGAACACGCAGCCGGGGGGCATCCGGCTGCGGCCCAACGAC
CCCTACACCATCTACACCACGGACATTTCCGCCATCAACCTCAACACCGACCTCTACGGC
TCGCACCCGGTGTACATGGACCTCCGCAGCCTGGGCGGCCGCGGCGTCGCGCACGCCGTG
CTGCTGCTCAACAGCAATGGCATGGATGTGTTCTACAGGGGCACGTCGCTGACCTACAAG
GTCATCGGAGGTCTTCTCGACTTCTACTTCTTCTCGGGCCCGACGCCGTTGGCCATAGTG
GATCAGTACACGTCGATGATCGGCCGTCCCGCGCCCATGCCTTACTGGGCATTCGGGTTC
CACCAATGTAGGTGGGGGTACAAGAACCTTTCAGTGGTAGAGGGCGTTGTGGAAGGTTAC
CGTAATGCCCAGATACCGCTGGACGTGATCTGGAACGATGACGACCACATGGATGCCGCT
AAGGACTTCACACTCGATCCGGTCAACTACCCACGCCCCAAACTGCTGGCGTTCCTTGAC
AAGATCCATGCGCAAGGCATGAAGTACATCGTCCTCATCGACCCTGGCATTGCCGTGAAC
AGCTCCTATGGCGTCTACCAGCGTGGCATGGAACGTGACATCTTTATCAAGCTGGACGGG
CAGCCATACCTCGCCCAGGTGTGGCCTGGCCCCGTCTACTTCCCGGACTTCCTCAACCCG
AACGGTGTGTCGTGGTGGATCGATGAGGTGCGGAGGTTTCATGATCTGGTCCCGGTGGAT
GGCCTCTGGATTGACATGAACGAGGCCTCCAACTTCTGCACGGGCAAGTGCACGATTCCG
AAGACGCACCAGTGCCCTATTCCTGACACCAAGACACCATGGCTCTGTTGCTTGGATTGC
AAGAACCTTACAAACACGAGGTGGGATGAGCCGCCGTACAAGATCAACGCCTCCGGGCAG
ACTGCCCGTCTCGGCTTCAACACCATCGCAACCAGCGCTACACACTACAACGGCATCCTG
GAGTACAATGCGCACAGTCTGTATGGCTTCTCGCAGGCCATTGCCACGCATACGGCGCTG
CAAGGGCTGCAGGGGAAGAGGCCGTTCATCCTGACCCGCTCCACGTTCGTCGGGTCGGGG
GCGTATGCCGCGCACTGGACCGGAGACAACAAGGGCACGTGGGAAAATCTCCGTTACTCG
ATCTCAACCATGCTCAACTTTGGCATCTTCGGCATGCCCATGGTTGGCTCTGACATCTGC
GGTTTCTACCCGTCGCCGACTGAGGAGCTCTGCAACAGGTGGATTGAGCTCGGGGCCTTC
TACCCCTTCTCCAGGGACCATGCCAACTTCGCGTCACCGAGGCAGGAGCTGTATGTCTGG
GACTCCGTGGCGAAGTCTGCTCGGAACGCGCTCGGCATGCGGTACAAGCTGCTCCCCTAC
CTGTACACGCTCAACTACCAGGCGCACCTGACCGGGGCCCCCGTGGCGCGGCCGGTGTTC
TTCTCCTTCCCCGACTTCACGCCGTGCTACGGGCTGAGCACGCAGTTCCTGCTCGGTCCC
GGCGTCATGGTGTCCCCGGTCCTCGAGCAGGGCGCCACTTCGGTGAGCGCCATGTTCCCG
CCGGGCACCTGGTACAACCTGTTCGACATGAGTAAGGTGGTGGTGTCCAGGAGCGGGGCC
CCAGTGAAGCTGGACGCGCCGCTGAACGAGATCAACGTGCACGTGTACCAGAACACGATC
CTGCCGATGCAGCGCGGCGGGTTCGTCTCCAAGGACGCCCGGGCGACGCCGTTCACGCTC
GTGGTCGCGTTCCCGTTCGGGGCGACGCAGGCCGACGCGGAGGGCGCGGTGTACGTGGAC
GACGACGAGCGCCCGGAGATGGTGCTCGCGGAAGGCCAGGCGTCGTACGTGCGTTTCCAC
GCGAGCGTGCGCGGAAAGGCCGTGACGGTGCGGTCGGAGGTGCTGATGGGAAGCTACAGC
CTGCACAAGGGGCTGGTCGTCGAGAAGCTCTCGGTGCTGGGTCTGGAGGGTACCGGCAAG
GACCTTGCCATCCAGGTGGACGGCACGGACGCCACTGCCGTCGCGACGTCGAGCCCTTAC
TTTGCAGCAGGTGGCAACGCGAAGCTGCAGGGGGAAGAAGGCGTCGAGGATAGTAAGAAC
GGCGTCATGGTGGAGATCGGCGGGCTGGCATTGCCGCTCGGGAAGAGCTTCACCATGACA
TGGAACATGCGGATCGAAGCATAG

Peptide Sequence

PEP ID

Zm00001d039994_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:22276219:22281890:-1 gene:Zm00001d039994 transcript:Zm00001d039994_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-xylosidase 1
Sequence

MLSFSRSAILSYLLWCLLFLTLASSNGAVATAKPKAGCGYKLVSLVQLPNGGGLVGYLQV
KQRTSTYGPDIPRLRLFVKHETRERVRVQITDADKQRWEVPYNLLPREPAPPVTGGKVTG
APFTGAEYPGEELVFTYGRDPFWFAVHRRSTRQPLFNTSAGALVFKDQYLEVSTALPKNA
ALYGLGENTQPGGIRLRPNDPYTIYTTDISAINLNTDLYGSHPVYMDLRSLGGRGVAHAV
LLLNSNGMDVFYRGTSLTYKVIGGLLDFYFFSGPTPLAIVDQYTSMIGRPAPMPYWAFGF
HQCRWGYKNLSVVEGVVEGYRNAQIPLDVIWNDDDHMDAAKDFTLDPVNYPRPKLLAFLD
KIHAQGMKYIVLIDPGIAVNSSYGVYQRGMERDIFIKLDGQPYLAQVWPGPVYFPDFLNP
NGVSWWIDEVRRFHDLVPVDGLWIDMNEASNFCTGKCTIPKTHQCPIPDTKTPWLCCLDC
KNLTNTRWDEPPYKINASGQTARLGFNTIATSATHYNGILEYNAHSLYGFSQAIATHTAL
QGLQGKRPFILTRSTFVGSGAYAAHWTGDNKGTWENLRYSISTMLNFGIFGMPMVGSDIC
GFYPSPTEELCNRWIELGAFYPFSRDHANFASPRQELYVWDSVAKSARNALGMRYKLLPY
LYTLNYQAHLTGAPVARPVFFSFPDFTPCYGLSTQFLLGPGVMVSPVLEQGATSVSAMFP
PGTWYNLFDMSKVVVSRSGAPVKLDAPLNEINVHVYQNTILPMQRGGFVSKDARATPFTL
VVAFPFGATQADAEGAVYVDDDERPEMVLAEGQASYVRFHASVRGKAVTVRSEVLMGSYS
LHKGLVVEKLSVLGLEGTGKDLAIQVDGTDATAVATSSPYFAAGGNAKLQGEEGVEDSKN
GVMVEIGGLALPLGKSFTMTWNMRIEA

Transcript Sequence

Transcript ID

Zm00001d039994_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:22276219:22281890:-1 gene:Zm00001d039994 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha-xylosidase 1
Sequence

ATCGGTATCCCCTGGACATGCCACTCAATGCATTCAGAGGGCGTAGCTGCTCAGCTGCCA
CTGCTCACTCCCCGCCATTAATTCGTAGTATTCAATACCACAGCAGTACCTCTCTCTCTC
TCTCTCTCACCTTCTATCTAGGCATCTCCTCGTGACCTCGTCACTGTCTTGCATTTCATA
TACAGTTCACAGTTCACGCTGCAGGGCAGTGGCCATAGAGTAGCTCGTGAGCGAGGGAGC
AAAAACCAGTGAAGAAAAAGAAAAAAAAAACAACGGGGCAAAACGAAATGCTGTCTTTTT
CTCGTTCGGCCATCCTCTCCTACCTACTGTGGTGTCTTCTATTTCTCACATTGGCAAGCA
GCAATGGCGCGGTCGCCACAGCAAAGCCGAAGGCTGGGTGCGGGTACAAGCTGGTCTCCC
TTGTTCAGCTGCCCAACGGGGGAGGCCTTGTGGGTTACCTGCAGGTGAAGCAGCGCACCT
CCACTTATGGTCCTGACATCCCTCGCCTCAGGCTCTTTGTCAAGCACGAGACCAGGGAGA
GGGTGCGCGTGCAGATTACAGATGCAGATAAGCAGAGGTGGGAGGTCCCCTACAACCTGC
TCCCAAGGGAGCCAGCCCCACCCGTGACCGGCGGCAAGGTCACGGGCGCCCCCTTCACGG
GCGCCGAGTACCCCGGCGAGGAGCTGGTGTTCACCTATGGGCGCGACCCGTTCTGGTTCG
CGGTGCACCGCCGGTCCACTCGGCAGCCGCTGTTCAACACCAGCGCCGGCGCGCTGGTGT
TCAAGGACCAGTACCTGGAGGTGTCCACGGCGCTGCCCAAGAACGCCGCCCTGTACGGGC
TCGGCGAGAACACGCAGCCGGGGGGCATCCGGCTGCGGCCCAACGACCCCTACACCATCT
ACACCACGGACATTTCCGCCATCAACCTCAACACCGACCTCTACGGCTCGCACCCGGTGT
ACATGGACCTCCGCAGCCTGGGCGGCCGCGGCGTCGCGCACGCCGTGCTGCTGCTCAACA
GCAATGGCATGGATGTGTTCTACAGGGGCACGTCGCTGACCTACAAGGTCATCGGAGGTC
TTCTCGACTTCTACTTCTTCTCGGGCCCGACGCCGTTGGCCATAGTGGATCAGTACACGT
CGATGATCGGCCGTCCCGCGCCCATGCCTTACTGGGCATTCGGGTTCCACCAATGTAGGT
GGGGGTACAAGAACCTTTCAGTGGTAGAGGGCGTTGTGGAAGGTTACCGTAATGCCCAGA
TACCGCTGGACGTGATCTGGAACGATGACGACCACATGGATGCCGCTAAGGACTTCACAC
TCGATCCGGTCAACTACCCACGCCCCAAACTGCTGGCGTTCCTTGACAAGATCCATGCGC
AAGGCATGAAGTACATCGTCCTCATCGACCCTGGCATTGCCGTGAACAGCTCCTATGGCG
TCTACCAGCGTGGCATGGAACGTGACATCTTTATCAAGCTGGACGGGCAGCCATACCTCG
CCCAGGTGTGGCCTGGCCCCGTCTACTTCCCGGACTTCCTCAACCCGAACGGTGTGTCGT
GGTGGATCGATGAGGTGCGGAGGTTTCATGATCTGGTCCCGGTGGATGGCCTCTGGATTG
ACATGAACGAGGCCTCCAACTTCTGCACGGGCAAGTGCACGATTCCGAAGACGCACCAGT
GCCCTATTCCTGACACCAAGACACCATGGCTCTGTTGCTTGGATTGCAAGAACCTTACAA
ACACGAGGTGGGATGAGCCGCCGTACAAGATCAACGCCTCCGGGCAGACTGCCCGTCTCG
GCTTCAACACCATCGCAACCAGCGCTACACACTACAACGGCATCCTGGAGTACAATGCGC
ACAGTCTGTATGGCTTCTCGCAGGCCATTGCCACGCATACGGCGCTGCAAGGGCTGCAGG
GGAAGAGGCCGTTCATCCTGACCCGCTCCACGTTCGTCGGGTCGGGGGCGTATGCCGCGC
ACTGGACCGGAGACAACAAGGGCACGTGGGAAAATCTCCGTTACTCGATCTCAACCATGC
TCAACTTTGGCATCTTCGGCATGCCCATGGTTGGCTCTGACATCTGCGGTTTCTACCCGT
CGCCGACTGAGGAGCTCTGCAACAGGTGGATTGAGCTCGGGGCCTTCTACCCCTTCTCCA
GGGACCATGCCAACTTCGCGTCACCGAGGCAGGAGCTGTATGTCTGGGACTCCGTGGCGA
AGTCTGCTCGGAACGCGCTCGGCATGCGGTACAAGCTGCTCCCCTACCTGTACACGCTCA
ACTACCAGGCGCACCTGACCGGGGCCCCCGTGGCGCGGCCGGTGTTCTTCTCCTTCCCCG
ACTTCACGCCGTGCTACGGGCTGAGCACGCAGTTCCTGCTCGGTCCCGGCGTCATGGTGT
CCCCGGTCCTCGAGCAGGGCGCCACTTCGGTGAGCGCCATGTTCCCGCCGGGCACCTGGT
ACAACCTGTTCGACATGAGTAAGGTGGTGGTGTCCAGGAGCGGGGCCCCAGTGAAGCTGG
ACGCGCCGCTGAACGAGATCAACGTGCACGTGTACCAGAACACGATCCTGCCGATGCAGC
GCGGCGGGTTCGTCTCCAAGGACGCCCGGGCGACGCCGTTCACGCTCGTGGTCGCGTTCC
CGTTCGGGGCGACGCAGGCCGACGCGGAGGGCGCGGTGTACGTGGACGACGACGAGCGCC
CGGAGATGGTGCTCGCGGAAGGCCAGGCGTCGTACGTGCGTTTCCACGCGAGCGTGCGCG
GAAAGGCCGTGACGGTGCGGTCGGAGGTGCTGATGGGAAGCTACAGCCTGCACAAGGGGC
TGGTCGTCGAGAAGCTCTCGGTGCTGGGTCTGGAGGGTACCGGCAAGGACCTTGCCATCC
AGGTGGACGGCACGGACGCCACTGCCGTCGCGACGTCGAGCCCTTACTTTGCAGCAGGTG
GCAACGCGAAGCTGCAGGGGGAAGAAGGCGTCGAGGATAGTAAGAACGGCGTCATGGTGG
AGATCGGCGGGCTGGCATTGCCGCTCGGGAAGAGCTTCACCATGACATGGAACATGCGGA
TCGAAGCATAGGTCGAGTGATGCTGTGCTTCCGTCTCCATGAATTTGCTTAAAGTCGTGT
TCCGTTTCTGATTTAGATGGGTAGATCCTGCCATGCTGATGTGCAGTCAGAATCCATATT
CTGAAAAATCTGTCATCAGGGGGTGCTCTGTGCAAGGAGCAGAGTACAACATTGCTGCAA
CAATAAAAGATTGAATCTTTGACGTTTGACTAG