Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039971_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:3:21174769:21199554:-1 gene:Zm00001d039971 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallo-hydrolase/oxidoreductase superfamily protein
Sequence

ATGGCTTCCCCCTCGTACAGGCTTGCGGCGGCGATCACGGCCCCCTCGACCGGCGAGTTC
CTCGTCGTCCGGCAGCCGCGCCCGCCATCCCCACCCGAGGAGGAAGAGGATTACCGGCGC
TTCGTCGACAGCGATCTCTACGACCTCCCGTCCGCGCCCCTCGGGCCACTCGAGGGGGCA
CCCCGGTCGGAGGTGGCCATCGGCGGCGCGGACTCTGTCGCCAGCCGCCTCGACCTCTCG
CGCCTCGACGTGTCCGCCGCCCTTGATCAGATTTTTCACCAATTTGGCTTGCCGGCTGGG
ATGAGTGGGGAGTGGAGGCTCCTGAAGTATGTGGAGGAAGCAGAATTTGGCCCGGATGCT
GGCATTAACACGGTGTACATTGTCGGATCTCTTGAGTTGAGATTGGATGATCTGCCAGAG
TCATGTAAATGGATGTCCAAGGAGTGTGCATTGAGGTTGCTTTCGGAAGCGAAACCAGGT
AATGATCGCATAGGACAGTATGCATATATTGGACTTCTGAATTCGGAGCTGTCATCAAAC
TGCACAGCTTCTCCTGCATTGCCCTTCCAGGAATACCCACCTGGAATAACACTTGTACCT
ATGAAGAGTAGGACACTAGCGCCATTCCGTACAACTAATCTTGTGGTAGTAAGATCAACC
AATGGTGCTGGTGGATCTACATGTTCTGATTTTTTTGCTTCGGGGGAAGCTCTGCTTATA
GATCCCGGATGCAGCTCTCAGGTTCATGCAGAGCTTGCAGATCTCATTGATTCCCTTCCA
AAAAGGTTATTAGTTCTTGTTACACATCATCATCAGGATCACATTGAGGGAACTTGGCAG
ATTGACTACACTTCAGTAACTGGTGGTGAAAAGATATGCATAGGTGACCAAGAACTACAA
GTTGTTTTTGCACCTGGTCATACAGATGGTCATATGGGGCTTCTCCATGTAAATACCAAT
ACATTGGTTGTTGGAGATCATTGTGTAGGGCATGGAAGTGCAACCTTGGACAGTAGAAAT
GGTGGCAACATGAAGGATTACTTTGAAACTACATACAAATTCTTGGAGTTGTCACCACAT
GTATTAATTCCAATGCATGGAAGGATTAATCTATGGCCCAAGTATATGCTTTGTGGATAC
CTCAGGAATCGAAGGGCTAGAGAAGCGTCCATTCTGCACTCTATAGAGAATGGGGCCCAA
ACTCTTTTTGATATAGTTTCGAAGACTTACAGTGATGTTGACAGGAAGTTGTGGATTCCT
GCTTCTTTCAATGTTCGCCTTCATGTTGATCATCTGAACTCCCTACATAAATTGCCCAAG
GATTTCTCTTTGGAAATGTTCAGTCGAAGTTGTGATGATTTTATCTCTAGAGTTTGA

Peptide Sequence

PEP ID

Zm00001d039971_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:3:21174769:21199554:-1 gene:Zm00001d039971 transcript:Zm00001d039971_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallo-hydrolase/oxidoreductase superfamily protein
Sequence

MASPSYRLAAAITAPSTGEFLVVRQPRPPSPPEEEEDYRRFVDSDLYDLPSAPLGPLEGA
PRSEVAIGGADSVASRLDLSRLDVSAALDQIFHQFGLPAGMSGEWRLLKYVEEAEFGPDA
GINTVYIVGSLELRLDDLPESCKWMSKECALRLLSEAKPGNDRIGQYAYIGLLNSELSSN
CTASPALPFQEYPPGITLVPMKSRTLAPFRTTNLVVVRSTNGAGGSTCSDFFASGEALLI
DPGCSSQVHAELADLIDSLPKRLLVLVTHHHQDHIEGTWQIDYTSVTGGEKICIGDQELQ
VVFAPGHTDGHMGLLHVNTNTLVVGDHCVGHGSATLDSRNGGNMKDYFETTYKFLELSPH
VLIPMHGRINLWPKYMLCGYLRNRRAREASILHSIENGAQTLFDIVSKTYSDVDRKLWIP
ASFNVRLHVDHLNSLHKLPKDFSLEMFSRSCDDFISRV

Transcript Sequence

Transcript ID

Zm00001d039971_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:21174769:21199554:-1 gene:Zm00001d039971 gene_biotype:protein_coding transcript_biotype:protein_coding description:Metallo-hydrolase/oxidoreductase superfamily protein
Sequence

AGTGGCGCGCTCTAGATCCTTGTCCTCTGGTCTCCGGATGCGCAACGTTTACTCGCAAGC
ACGGACTGGGACCGCGCCAGCCAAGCGTGTGCAGGTCGCTGTCTGCTGCCATAGCTTGCC
CCGTCTGCCTGCGCGGATGAAGCTAGGCGTAGGCAGTAGGCACCTCGCCTAGTCTCCTGT
AAACACCCGCCCGCTAGTGCCAACCGCCAACCACCTCCAATTACTTCACAGCAGCGCGGC
GCCGAGAAGATGGCTTCCCCCTCGTACAGGCTTGCGGCGGCGATCACGGCCCCCTCGACC
GGCGAGTTCCTCGTCGTCCGGCAGCCGCGCCCGCCATCCCCACCCGAGGAGGAAGAGGAT
TACCGGCGCTTCGTCGACAGCGATCTCTACGACCTCCCGTCCGCGCCCCTCGGGCCACTC
GAGGGGGCACCCCGGTCGGAGGTGGCCATCGGCGGCGCGGACTCTGTCGCCAGCCGCCTC
GACCTCTCGCGCCTCGACGTGTCCGCCGCCCTTGATCAGATTTTTCACCAATTTGGCTTG
CCGGCTGGGATGAGTGGGGAGTGGAGGCTCCTGAAGTATGTGGAGGAAGCAGAATTTGGC
CCGGATGCTGGCATTAACACGGTGTACATTGTCGGATCTCTTGAGTTGAGATTGGATGAT
CTGCCAGAGTCATGTAAATGGATGTCCAAGGAGTGTGCATTGAGGTTGCTTTCGGAAGCG
AAACCAGGTAATGATCGCATAGGACAGTATGCATATATTGGACTTCTGAATTCGGAGCTG
TCATCAAACTGCACAGCTTCTCCTGCATTGCCCTTCCAGGAATACCCACCTGGAATAACA
CTTGTACCTATGAAGAGTAGGACACTAGCGCCATTCCGTACAACTAATCTTGTGGTAGTA
AGATCAACCAATGGTGCTGGTGGATCTACATGTTCTGATTTTTTTGCTTCGGGGGAAGCT
CTGCTTATAGATCCCGGATGCAGCTCTCAGGTTCATGCAGAGCTTGCAGATCTCATTGAT
TCCCTTCCAAAAAGGTTATTAGTTCTTGTTACACATCATCATCAGGATCACATTGAGGGA
ACTTGGCAGATTGACTACACTTCAGTAACTGGTGGTGAAAAGATATGCATAGGTGACCAA
GAACTACAAGTTGTTTTTGCACCTGGTCATACAGATGGTCATATGGGGCTTCTCCATGTA
AATACCAATACATTGGTTGTTGGAGATCATTGTGTAGGGCATGGAAGTGCAACCTTGGAC
AGTAGAAATGGTGGCAACATGAAGGATTACTTTGAAACTACATACAAATTCTTGGAGTTG
TCACCACATGTATTAATTCCAATGCATGGAAGGATTAATCTATGGCCCAAGTATATGCTT
TGTGGATACCTCAGGAATCGAAGGGCTAGAGAAGCGTCCATTCTGCACTCTATAGAGAAT
GGGGCCCAAACTCTTTTTGATATAGTTTCGAAGACTTACAGTGATGTTGACAGGAAGTTG
TGGATTCCTGCTTCTTTCAATGTTCGCCTTCATGTTGATCATCTGAACTCCCTACATAAA
TTGCCCAAGGATTTCTCTTTGGAAATGTTCAGTCGAAGTTGTGATGATTTTATCTCTAGA
GTTTGATGGCAAGTACGAGAAAAGGATCTTCTAATTCACTGCGTTGTGATTTCATTTAAG
CTGGCCCGTTCACCATTTGTTGTTTTATTATGTGCATGACACTGAACAATTCAATGATGG
GGAACGAAGTCTTGTAATAACCGATAAATATGTAGACTGGACACCAAGGCTACCATTCAC
ACTTCCGAAAATTTGTAAGATTTAACAACTCGAATATATGCAGGACTTCTCATT