Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039918_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:19351159:19355642:1 gene:Zm00001d039918 gene_biotype:protein_coding transcript_biotype:protein_coding description:cytochrome P450 family 77 subfamily A polypeptide 5 pseudogene
Sequence

ATGGTGCCAATGGACCCCTCGATCTCCTCGTCCTCCTCGCCTCTCCGGCTCCCCGGAACC
CCCACCAGCCCGGGCGCGAGCCCGAGGCCCACCCTCGTCGCGGCCGGCCGCCAGCCCGCC
GCCGCGCCCAGCACCACCCGCCTCCGCGCCATCTCGCCGTCCCAGTCCCCGCCCACCCCG
GCGTCCCCCGTGGAGCCGTTCGGCTTCGACGCGCTCAAGGGGACCTTCTCCGTGGACGTG
GCGGCGGCCGACGCGCGCTCGCTCGACGTCCCGCTCGCCGCGCCCTTCACCATCGCGTCC
TCCCGCCTCGTCGCGGTCTCCAACGTCGCCGTGCGCGTCGAGCTCCGCACCGGCGCTGTC
GGGTGGGGGGAGGCGCCCGTGTTGCCCTCCGTCACGGCCGAGGACCAGCCGGCAGCGCTC
GACGCCGCGGGACGGGCGTGCGCAGCGCTCGTCGGCGCCCCAGCGGCGCCCCTCGGCGCG
GTGCTCCAGGACCTCGCCAGTGTGCTTCCGGGACACGCCTTCGCCTCGGCCAGAGCAGGG
GTGGAGATGGCGCTGATTGATGCTGTTGCTAATAGCATTGGCATACCTCTATGGAGATTA
TTTGGAGGAGCATCAGATAGTTTGACAACTGACATCACAATTCCAATTGTGACCCCAAAT
GAAGCTGCTCAATTGGCTGCAAAATATCATGGACAAGGGTTTCAAACTCTGAAGCTCAAG
GTTGGGAAGAACTTGAATTCAGATATAGAAGTTCTGAAAGCTATACGACTTGTCCATCCA
GATTGCTCATTTATTTTGGATGCAAATGAGGGATACACAGCAAAACAAGCAATTGAAGTT
CTTGATAGACTAAATGAAATGGGAGTGACCCCTGTGCTCTTTGAACAACCAGTTCACAGA
GATGATTGGGACGGTCTCCGAGATGTTACCTCTGTGGCCATGGAGAAATACAAAGTCGCT
GTTGCTGCTGATGAAAGCTGTCGAAGTTTACTTGATGCTCAAAAAATAATAGATGGAAAT
CTTGCCCATGTTATTAATATCAAGCTGGCAAAGTTGGGGGTTCTTGGGGCCCTTGAAATA
ATTGATGCTGCAAGAAAAGCCAATATTGCTCTGATGATCGGTGGCATGGTTGAGACTAGG
ATCGCTATGGGCTTCGCTGGTCACTTAGCTGCTGGCCTTGGTTGCTTTAGTTTCATTGAC
CTGGACACACCTCTTTTACTGTCTGAAGATCCTGTATATGGTGGCTATGAAGCTTTCGGA
CCTCTGTACAAGTTTACAAATGCTCGTGGCCATGGCGGTTTCCTTCACTTGGACAATGAA
GCCTCGAAATGA

Peptide Sequence

PEP ID

Zm00001d039918_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:19351159:19355642:1 gene:Zm00001d039918 transcript:Zm00001d039918_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:cytochrome P450 family 77 subfamily A polypeptide 5 pseudogene
Sequence

MVPMDPSISSSSSPLRLPGTPTSPGASPRPTLVAAGRQPAAAPSTTRLRAISPSQSPPTP
ASPVEPFGFDALKGTFSVDVAAADARSLDVPLAAPFTIASSRLVAVSNVAVRVELRTGAV
GWGEAPVLPSVTAEDQPAALDAAGRACAALVGAPAAPLGAVLQDLASVLPGHAFASARAG
VEMALIDAVANSIGIPLWRLFGGASDSLTTDITIPIVTPNEAAQLAAKYHGQGFQTLKLK
VGKNLNSDIEVLKAIRLVHPDCSFILDANEGYTAKQAIEVLDRLNEMGVTPVLFEQPVHR
DDWDGLRDVTSVAMEKYKVAVAADESCRSLLDAQKIIDGNLAHVINIKLAKLGVLGALEI
IDAARKANIALMIGGMVETRIAMGFAGHLAAGLGCFSFIDLDTPLLLSEDPVYGGYEAFG
PLYKFTNARGHGGFLHLDNEASK

Transcript Sequence

Transcript ID

Zm00001d039918_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:19351159:19355642:1 gene:Zm00001d039918 gene_biotype:protein_coding transcript_biotype:protein_coding description:cytochrome P450 family 77 subfamily A polypeptide 5 pseudogene
Sequence

AGTGGGCAATGGTGCCAATGGACCCCTCGATCTCCTCGTCCTCCTCGCCTCTCCGGCTCC
CCGGAACCCCCACCAGCCCGGGCGCGAGCCCGAGGCCCACCCTCGTCGCGGCCGGCCGCC
AGCCCGCCGCCGCGCCCAGCACCACCCGCCTCCGCGCCATCTCGCCGTCCCAGTCCCCGC
CCACCCCGGCGTCCCCCGTGGAGCCGTTCGGCTTCGACGCGCTCAAGGGGACCTTCTCCG
TGGACGTGGCGGCGGCCGACGCGCGCTCGCTCGACGTCCCGCTCGCCGCGCCCTTCACCA
TCGCGTCCTCCCGCCTCGTCGCGGTCTCCAACGTCGCCGTGCGCGTCGAGCTCCGCACCG
GCGCTGTCGGGTGGGGGGAGGCGCCCGTGTTGCCCTCCGTCACGGCCGAGGACCAGCCGG
CAGCGCTCGACGCCGCGGGACGGGCGTGCGCAGCGCTCGTCGGCGCCCCAGCGGCGCCCC
TCGGCGCGGTGCTCCAGGACCTCGCCAGTGTGCTTCCGGGACACGCCTTCGCCTCGGCCA
GAGCAGGGGTGGAGATGGCGCTGATTGATGCTGTTGCTAATAGCATTGGCATACCTCTAT
GGAGATTATTTGGAGGAGCATCAGATAGTTTGACAACTGACATCACAATTCCAATTGTGA
CCCCAAATGAAGCTGCTCAATTGGCTGCAAAATATCATGGACAAGGGTTTCAAACTCTGA
AGCTCAAGGTTGGGAAGAACTTGAATTCAGATATAGAAGTTCTGAAAGCTATACGACTTG
TCCATCCAGATTGCTCATTTATTTTGGATGCAAATGAGGGATACACAGCAAAACAAGCAA
TTGAAGTTCTTGATAGACTAAATGAAATGGGAGTGACCCCTGTGCTCTTTGAACAACCAG
TTCACAGAGATGATTGGGACGGTCTCCGAGATGTTACCTCTGTGGCCATGGAGAAATACA
AAGTCGCTGTTGCTGCTGATGAAAGCTGTCGAAGTTTACTTGATGCTCAAAAAATAATAG
ATGGAAATCTTGCCCATGTTATTAATATCAAGCTGGCAAAGTTGGGGGTTCTTGGGGCCC
TTGAAATAATTGATGCTGCAAGAAAAGCCAATATTGCTCTGATGATCGGTGGCATGGTTG
AGACTAGGATCGCTATGGGCTTCGCTGGTCACTTAGCTGCTGGCCTTGGTTGCTTTAGTT
TCATTGACCTGGACACACCTCTTTTACTGTCTGAAGATCCTGTATATGGTGGCTATGAAG
CTTTCGGACCTCTGTACAAGTTTACAAATGCTCGTGGCCATGGCGGTTTCCTTCACTTGG
ACAATGAAGCCTCGAAATGAAGATGAAATACAAGTGATAGAAGTGAGCTTCATCGAAGCA
TTGCTGTGCATTCCGTAATGCACTGTTCCACTGGACAATCATCACATAACCGGAATCACA
CAAGCGATCGCAAGCATATAGCCATATAGGACCATTTAGTCAGCCTGTAGATAGACATTC
AGAAGGCTGTTGCAAGTCCAGTCAGGCCTGGAGCACTGGACTATTTGGTCAGCCTGTAGA
TATAGATATTCAGAAGGCTGTTCCCGCTGGCTCTGTTGTTTTATCCAGACATTCTATGCA
ATAAATACATCTGGTTGTAAATGTCAACACATGCAGCCCTGAGCCGTCGTAAGCCTTTGT
TGTTCTATAGCTGTTCAGTATAATTAAGGCTTTCCTTAATTACGCTGAAGCGAACGTATG
TAGGAGCAAATTTAACAATAGAGCCAACTATTGGCTGCAAGATTCTTATAAT