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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039874_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:17365718:17369090:-1 gene:Zm00001d039874 gene_biotype:protein_coding transcript_biotype:protein_coding description:scarecrow-like transcription factor 11 (SCL11)
Sequence

ATGGCGGCGAAGCGGGAGATCTCGAGCACCCTCAGGAACCTCAAGTTTATGCAGCGCGGC
GCGGCTGCGCAGAAGGCCGAGGAGAAGGCCGAGGTGGAGGTACAGGAGGAGGAGGTGGTG
ATGGCGCCGAGTGGAGGCTTCGCCTCGTCCGCGCAGGTCGTTAGGAAGTGCATAGTTATC
ATGGAGGGTAATCCTCATCCAGGAGCTATAAAGGGTCGGATGTCTTTCCAAAATTTCAAT
CCATCTATCGATAAACTAAATGAAGAGGCAAGAGGTGACCAGCAAACAGAATCAGCTTCC
CCCAGTAACTGTGACCAAGACAATGCAAACTCCAGCAGAGGGAATGAAGTTCCAGCATCA
AGATGTAGAGATTTTGGCATTCCCAGTTCAGAAAGCATATCTCTAAATGAACTGAAGAGG
AAGGAGCCCGACCTTGATATGGAAACACCGGCATCTTACAAGGAACCAAAAACCAATGTT
GGCGGTAGGTCATCTTCACAAAGCAATGGTCGCGGATCACACAAGTCCAACAAGCGTGAA
AAGCTCGACTTCAATCATCTAAGACCGAAGAAATGA

Peptide Sequence

PEP ID

Zm00001d039874_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:17365718:17369090:-1 gene:Zm00001d039874 transcript:Zm00001d039874_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:scarecrow-like transcription factor 11 (SCL11)
Sequence

MAAKREISSTLRNLKFMQRGAAAQKAEEKAEVEVQEEEVVMAPSGGFASSAQVVRKCIVI
MEGNPHPGAIKGRMSFQNFNPSIDKLNEEARGDQQTESASPSNCDQDNANSSRGNEVPAS
RCRDFGIPSSESISLNELKRKEPDLDMETPASYKEPKTNVGGRSSSQSNGRGSHKSNKRE
KLDFNHLRPKK

Transcript Sequence

Transcript ID

Zm00001d039874_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:17365718:17369090:-1 gene:Zm00001d039874 gene_biotype:protein_coding transcript_biotype:protein_coding description:scarecrow-like transcription factor 11 (SCL11)
Sequence

GAAATTACGTATTTGGCCCCGCGCCGCACGCCCTCTTCTCGTGCTCCAGCGGATTCGCTA
GGCCGCGAGCCTCCAAAACCCTAACCCTAAATTTGGGGGCGCTTGGGTCAAAGAGACGGG
GGGAGGAATCGAGCCGGCGGCTTGCGGCGGCATCAGCGATGGCGGCGAAGCGGGAGATCT
CGAGCACCCTCAGGAACCTCAAGTTTATGCAGCGCGGCGCGGCTGCGCAGAAGGCCGAGG
AGAAGGCCGAGGTGGAGGTACAGGAGGAGGAGGTGGTGATGGCGCCGAGTGGAGGCTTCG
CCTCGTCCGCGCAGGTCGTTAGGAAGTGCATAGTTATCATGGAGGGTAATCCTCATCCAG
GAGCTATAAAGGGTCGGATGTCTTTCCAAAATTTCAATCCATCTATCGATAAACTAAATG
AAGAGGCAAGAGGTGACCAGCAAACAGAATCAGCTTCCCCCAGTAACTGTGACCAAGACA
ATGCAAACTCCAGCAGAGGGAATGAAGTTCCAGCATCAAGATGTAGAGATTTTGGCATTC
CCAGTTCAGAAAGCATATCTCTAAATGAACTGAAGAGGAAGGAGCCCGACCTTGATATGG
AAACACCGGCATCTTACAAGGAACCAAAAACCAATGTTGGCGGTAGGTCATCTTCACAAA
GCAATGGTCGCGGATCACACAAGTCCAACAAGCGTGAAAAGCTCGACTTCAATCATCTAA
GACCGAAGAAATGAAAAATGGTGTTCGAGTTAGCTCTTGTACTCTGTTTGTAGCTGTACC
CAATTGGCCATCTGCTGTGTTTTGTCGATTATATCTAGAGAGCTGGTAACCATGTCCATG
TGACCATGTGGCATGCATTCTTAGTGAGATTATGTGGTGTTAATCATTTTTCTTTCTATT
GATGTGTTCTACTCAACTACTCTGCTGTAAGATGTGAGGCTCTACTGTACAGCAGTGATG
AATGCAGTTCTGCTTATGTTTTATGTCGCCT