Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039866_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:17168377:17172935:1 gene:Zm00001d039866 gene_biotype:protein_coding transcript_biotype:protein_coding description:Triosephosphate isomerase
Sequence	ATGAGCTCGCCGACGCCATTACGTCCCGCCGGCGGCGGCAGTTACTACCCGCTCCACCGG CGGCGCGGGCGACCGGGCCCAGGCCCGGGCGCGGGTTTAAGAAGGCCGCGGGTGCGCCGG TGCAAGATGAAGCTGATGTACTTCCTCATGGACAGGGACGAGCAGCGCGAGAAGCGGCTG GAGCTCGAGTTCGAGGTGTCGGAGCTGGAGACGGTGCTCGAGAAGGAGCAGCAGCTGGGC AGGGTCCTGCAGTGCTCGCTCCAGGGGCGCGTCGTGTGCCATTGCTGCCTCTCCGCGCTG GTTCCTACCAACGTTAGGGGCCTTTTAGCGGAGCTAGCGGTGGTGGAGGACGAGATATTC TACTTGGAGAAGAAGGTGGACGACCTGCGCCTGAGGCTGCGCCGGGAGCAGAAGTGGACG GACCACTGCATCCTCCACCACCAGCAGCAGCAGCAGCAGCACAACCGCCAGCAACGGCAC TCCGTGTCCGTGTCCAGGAGGGAGCTCCAGCTCCAACAAGCAGGCGCCCAGCAGCTACCC AGGCTACCGTGTCCGGGTCCGGGCAGCGACGAGGCTCCCGAACGCGAGAGCAAGGCTTCC GTCGGATCCGCCTCCGCCAAAGGAGATGAGACAGAGCACGTCGTCGGCAGGAGGAGCAGC CACTGCCACTCGTCGTCGTCGTCGTCGGAGAACCCGTACCGGCCGACGCCTCCCGAGCGG AAGACGTACTGCATGGCGAGCAGCCCCAACAGGCTCTCGGAGGAGCTCGTCAGGCTGACG GTGACCATCTTCCACAAGCTCAACAAGACGGCGACGGCGACGGCGGCGGACGCGGGGGAG CTGGATCTGGAGCTGGAGCCGAGCGGCGGCGGCGCGTCGTCGTCCAAGCTCAACATCTCG TGCATCGGCCCCAGGAGCCTCGTCCCCAGGGTCTCCGCGTCCGTGAACGGCGCCGCGGCG GCGATGAGCCCGCTCAAGAGCCGGAGAGCGGCGGCCAAGGGCGGCGGCGCGGAGACCGGG TCTGCCGCCGGGTGCCAGAGGAGGTTCGTCGAGTTCACCAGAGGCTCCGTCGACGTCAGC CGCATCTCACTGTGCCTCGTCGACATCAAGAACCTGAGAGGCCTGATGCAGAAGCTCTGC GCCGTCGACCCCAGCCTTATGACGAACAAGCAGAAGCTGGCGTTTTGGATCAACGTCTAC AACTTCTGCGTGATGCATGCGTTTCTCCAGCACGGTTTGCCTCCGTCTCCGGAGAAGCTT CTTGCGCTGCTGAATCAGGCTTCGGTGAACGTCGGCGGAACAGTGCTGAACGTTGTGTCG ATCGAGCACCTCATCCTGAGGCACTCTCCTGACGCCAAGCAAGGCATTATGGGCGACGAC GGACAGACGGATCTGCTGCACTCGTACGGGCTAGGGTATCCCGAGCCCAACGTCGTCTTC GCGCTGTGCAGAGGCAGCCGCTCCTCGCCAGCACTGCGCGTGTACACGGCGGAGGACGTG TCGAACGAGCTGGAGCGGGCCAAGGTGGAGTACCTGGAGTCTTCGGTGCGCGTCGCCGGC AGGAAGCAGCGCGCCGTCGTGGTGCCCAAGCTGCTGCACTGGCACATGCGCGACTTCGCC GACGACGCCGCGTCGCTGCTGGAGTGGGTGCACAGCCAGCTGCCCAGGGCGTCGGGGCCG CTCCGCCGGGCCATCAGGGAGGTCCTGGGCGCCAACATGGGCAGCGGCAGCAGGGCGCCC ACGCCGGCGCCGGCGGCCAAGATGCTGGAGGTCGAGCCGTACGACGCCGACTTCTGCTAC CTGCTGCCCGTCTGGTGA

Peptide Sequence

PEP ID	Zm00001d039866_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:17168377:17172935:1 gene:Zm00001d039866 transcript:Zm00001d039866_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Triosephosphate isomerase
Sequence	MSSPTPLRPAGGGSYYPLHRRRGRPGPGPGAGLRRPRVRRCKMKLMYFLMDRDEQREKRL ELEFEVSELETVLEKEQQLGRVLQCSLQGRVVCHCCLSALVPTNVRGLLAELAVVEDEIF YLEKKVDDLRLRLRREQKWTDHCILHHQQQQQQHNRQQRHSVSVSRRELQLQQAGAQQLP RLPCPGPGSDEAPERESKASVGSASAKGDETEHVVGRRSSHCHSSSSSSENPYRPTPPER KTYCMASSPNRLSEELVRLTVTIFHKLNKTATATAADAGELDLELEPSGGGASSSKLNIS CIGPRSLVPRVSASVNGAAAAMSPLKSRRAAAKGGGAETGSAAGCQRRFVEFTRGSVDVS RISLCLVDIKNLRGLMQKLCAVDPSLMTNKQKLAFWINVYNFCVMHAFLQHGLPPSPEKL LALLNQASVNVGGTVLNVVSIEHLILRHSPDAKQGIMGDDGQTDLLHSYGLGYPEPNVVF ALCRGSRSSPALRVYTAEDVSNELERAKVEYLESSVRVAGRKQRAVVVPKLLHWHMRDFA DDAASLLEWVHSQLPRASGPLRRAIREVLGANMGSGSRAPTPAPAAKMLEVEPYDADFCY LLPVW

Transcript Sequence

Transcript ID	Zm00001d039866_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:17168377:17172935:1 gene:Zm00001d039866 gene_biotype:protein_coding transcript_biotype:protein_coding description:Triosephosphate isomerase
Sequence	GCGACACCGACGCGCCCTCGCCACCCCGTCACCCGTTGCGCTGCCTCCCTCCCTAGTCCC TATCTCTCTCTGCCGTCTGCCCCGAAAGAGGCGGCAACCCCTCCGCGCGGGGTTCTTCTC TCGGTGCTCTGACAGGCGGCGCGGCAGCGAGACGTCGCTCTCTCTCTCACTCCCCGCATC CTCCTTTTCTTACCCGCGCCGGAGAGACCGATCGAGAGGCCGAGACCCCCCCCCCCCCCC CCCCCCCCCCCCACAACACTAAATGAGCTCGCCGACGCCATTACGTCCCGCCGGCGGCGG CAGTTACTACCCGCTCCACCGGCGGCGCGGGCGACCGGGCCCAGGCCCGGGCGCGGGTTT AAGAAGGCCGCGGGTGCGCCGGTGCAAGATGAAGCTGATGTACTTCCTCATGGACAGGGA CGAGCAGCGCGAGAAGCGGCTGGAGCTCGAGTTCGAGGTGTCGGAGCTGGAGACGGTGCT CGAGAAGGAGCAGCAGCTGGGCAGGGTCCTGCAGTGCTCGCTCCAGGGGCGCGTCGTGTG CCATTGCTGCCTCTCCGCGCTGGTTCCTACCAACGTTAGGGGCCTTTTAGCGGAGCTAGC GGTGGTGGAGGACGAGATATTCTACTTGGAGAAGAAGGTGGACGACCTGCGCCTGAGGCT GCGCCGGGAGCAGAAGTGGACGGACCACTGCATCCTCCACCACCAGCAGCAGCAGCAGCA GCACAACCGCCAGCAACGGCACTCCGTGTCCGTGTCCAGGAGGGAGCTCCAGCTCCAACA AGCAGGCGCCCAGCAGCTACCCAGGCTACCGTGTCCGGGTCCGGGCAGCGACGAGGCTCC CGAACGCGAGAGCAAGGCTTCCGTCGGATCCGCCTCCGCCAAAGGAGATGAGACAGAGCA CGTCGTCGGCAGGAGGAGCAGCCACTGCCACTCGTCGTCGTCGTCGTCGGAGAACCCGTA CCGGCCGACGCCTCCCGAGCGGAAGACGTACTGCATGGCGAGCAGCCCCAACAGGCTCTC GGAGGAGCTCGTCAGGCTGACGGTGACCATCTTCCACAAGCTCAACAAGACGGCGACGGC GACGGCGGCGGACGCGGGGGAGCTGGATCTGGAGCTGGAGCCGAGCGGCGGCGGCGCGTC GTCGTCCAAGCTCAACATCTCGTGCATCGGCCCCAGGAGCCTCGTCCCCAGGGTCTCCGC GTCCGTGAACGGCGCCGCGGCGGCGATGAGCCCGCTCAAGAGCCGGAGAGCGGCGGCCAA GGGCGGCGGCGCGGAGACCGGGTCTGCCGCCGGGTGCCAGAGGAGGTTCGTCGAGTTCAC CAGAGGCTCCGTCGACGTCAGCCGCATCTCACTGTGCCTCGTCGACATCAAGAACCTGAG AGGCCTGATGCAGAAGCTCTGCGCCGTCGACCCCAGCCTTATGACGAACAAGCAGAAGCT GGCGTTTTGGATCAACGTCTACAACTTCTGCGTGATGCATGCGTTTCTCCAGCACGGTTT GCCTCCGTCTCCGGAGAAGCTTCTTGCGCTGCTGAATCAGGCTTCGGTGAACGTCGGCGG AACAGTGCTGAACGTTGTGTCGATCGAGCACCTCATCCTGAGGCACTCTCCTGACGCCAA GCAAGGCATTATGGGCGACGACGGACAGACGGATCTGCTGCACTCGTACGGGCTAGGGTA TCCCGAGCCCAACGTCGTCTTCGCGCTGTGCAGAGGCAGCCGCTCCTCGCCAGCACTGCG CGTGTACACGGCGGAGGACGTGTCGAACGAGCTGGAGCGGGCCAAGGTGGAGTACCTGGA GTCTTCGGTGCGCGTCGCCGGCAGGAAGCAGCGCGCCGTCGTGGTGCCCAAGCTGCTGCA CTGGCACATGCGCGACTTCGCCGACGACGCCGCGTCGCTGCTGGAGTGGGTGCACAGCCA GCTGCCCAGGGCGTCGGGGCCGCTCCGCCGGGCCATCAGGGAGGTCCTGGGCGCCAACAT GGGCAGCGGCAGCAGGGCGCCCACGCCGGCGCCGGCGGCCAAGATGCTGGAGGTCGAGCC GTACGACGCCGACTTCTGCTACCTGCTGCCCGTCTGGTGAGCGTCAGCGACCGTCCGTGT CCATGTAAGCAAGGCATTGCTAGCTGCGCGCCGCGCGGGTCAAGTTCTGCTGTGACCATT GCTGCAGTGCGAGGTGGTGACGATGTCGTGCATGTGAAGCGTGAACTACTTCCGCCGTAT GATAGTTTTACTACGTACATTTTTTTGTGCGTTGTGTTGACGTGCAGAAGTATCAATCAA TAAGGCCTTGTTCATATTCTATATGGATTCGAAAAATTGCGAAGAATTTTGACTTGCTAT GAATTTTAACACATCCAATTCTGTCCAATAGATATAGATTGTGGTCAAAACGAACATTGC CCTAATAATAAGGAAATCATATACTTT