Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039848_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:16535244:16539074:-1 gene:Zm00001d039848 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding Rossmann-fold superfamily protein
Sequence

ATGGGTATCCTCGCGCTCATCACCGGCAAGGCGGGCGCCAGCGGGTTCGGGTCGGCGTCC
ACGGCGGAGCAGGTCACCGACGGCGCTGACGCCAGCCGCCTCACCGTCGCTATCACAGGA
GGAGCTAGTGGCATTGGTCTGGAGACATCAAGAGTCTTCGCCCTGAGAGGAGCCCATGTG
GTCATCGCTGCTAGAAACACAGAGGCTGCATCAGAAGCAAGAAAGACCATCATGGAGAAG
AACCCAACGGCACGTATTGATGTTCTGAAGCTAGACCTCAGCTCCCTCAAGTCTGTCAGG
GCTTTTGTGGACCAGTTCAACTCGATGAAACTCCCTCTAAACATCCTGATAAATAATGCA
GGCGTCATGTTCTGCCCTTTTCAACTGTCTAAAGACGGGGTCGAGATGCAGTTCGCGACA
AATCATCTAGGACACTTTCTGCTTACCAATCTCCTCCTTGATACCATGAAGGCCACTGCC
AAGTCTACGGGCATTGAGGGCCGCATTGTGAACCTGTCATCAGTCGCCCACCACCATACG
TATCCGAAGGGAATTGACTTCGATAACCTCAACGATGAGAAAATATACAACGACAAAATG
GCTTATGGACAGTCTAAGCTGGCGAACTTGCTGCATGCGAAGGAGCTCTCTAGAAGGCTG
AAGGAAGAAGGAGCAAACATCACAGTTAACAGTGTCCATCCTGGATTGATCATGACCAAT
TTGATGAGGCACTCCTTTGTTCTCATGAAGGTGCTTCAGGTTGCCACTTACATACTGTGG
AAGAATGTACCCCAGGGAGCTGCGACTACTTGCTACGTAGGACTGAGCCCTCAACTCAAG
GGAGTGACAGGAAAGTACTTTGCTGACTGCAACGTGGAGAAGACGAGCAAACTGGCGAGG
AGCGAGGAGTTGGCGAAGCAGCTCTGGGACTTCAGCGAGGAGCTGATCAAGTCTGCGAAG
TGA

Peptide Sequence

PEP ID

Zm00001d039848_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:16535244:16539074:-1 gene:Zm00001d039848 transcript:Zm00001d039848_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding Rossmann-fold superfamily protein
Sequence

MGILALITGKAGASGFGSASTAEQVTDGADASRLTVAITGGASGIGLETSRVFALRGAHV
VIAARNTEAASEARKTIMEKNPTARIDVLKLDLSSLKSVRAFVDQFNSMKLPLNILINNA
GVMFCPFQLSKDGVEMQFATNHLGHFLLTNLLLDTMKATAKSTGIEGRIVNLSSVAHHHT
YPKGIDFDNLNDEKIYNDKMAYGQSKLANLLHAKELSRRLKEEGANITVNSVHPGLIMTN
LMRHSFVLMKVLQVATYILWKNVPQGAATTCYVGLSPQLKGVTGKYFADCNVEKTSKLAR
SEELAKQLWDFSEELIKSAK

Transcript Sequence

Transcript ID

Zm00001d039848_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:16535244:16539074:-1 gene:Zm00001d039848 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding Rossmann-fold superfamily protein
Sequence

AACCATAAATAACCTCACCCGCTCTCCCTCCGCCCTCTTCCCATGCACCGCCCGCTGCCG
TGCCCGCCCTGCCCTCCACCTTCTCCCGGCGCAATAAACAAGTCGAGGCGAGGCGAGGCG
GCAGCGGCGGCGGCGGCATTGCCGAGATTTCCGTGATTCTTGCGCTTGTTAGTTGTGCTG
TGTATAGTTGGGCCGGCCGGGGGTGGTTCCGTTCAGTTCCTTATCTGTTGGAGTAGTCGT
CGGCGGCGATGGGTATCCTCGCGCTCATCACCGGCAAGGCGGGCGCCAGCGGGTTCGGGT
CGGCGTCCACGGCGGAGCAGGTCACCGACGGCGCTGACGCCAGCCGCCTCACCGTCGCTA
TCACAGGAGGAGCTAGTGGCATTGGTCTGGAGACATCAAGAGTCTTCGCCCTGAGAGGAG
CCCATGTGGTCATCGCTGCTAGAAACACAGAGGCTGCATCAGAAGCAAGAAAGACCATCA
TGGAGAAGAACCCAACGGCACGTATTGATGTTCTGAAGCTAGACCTCAGCTCCCTCAAGT
CTGTCAGGGCTTTTGTGGACCAGTTCAACTCGATGAAACTCCCTCTAAACATCCTGATAA
ATAATGCAGGCGTCATGTTCTGCCCTTTTCAACTGTCTAAAGACGGGGTCGAGATGCAGT
TCGCGACAAATCATCTAGGACACTTTCTGCTTACCAATCTCCTCCTTGATACCATGAAGG
CCACTGCCAAGTCTACGGGCATTGAGGGCCGCATTGTGAACCTGTCATCAGTCGCCCACC
ACCATACGTATCCGAAGGGAATTGACTTCGATAACCTCAACGATGAGAAAATATACAACG
ACAAAATGGCTTATGGACAGTCTAAGCTGGCGAACTTGCTGCATGCGAAGGAGCTCTCTA
GAAGGCTGAAGGAAGAAGGAGCAAACATCACAGTTAACAGTGTCCATCCTGGATTGATCA
TGACCAATTTGATGAGGCACTCCTTTGTTCTCATGAAGGTGCTTCAGGTTGCCACTTACA
TACTGTGGAAGAATGTACCCCAGGGAGCTGCGACTACTTGCTACGTAGGACTGAGCCCTC
AACTCAAGGGAGTGACAGGAAAGTACTTTGCTGACTGCAACGTGGAGAAGACGAGCAAAC
TGGCGAGGAGCGAGGAGTTGGCGAAGCAGCTCTGGGACTTCAGCGAGGAGCTGATCAAGT
CTGCGAAGTGAGAGCCGAAAGAGCTGGATCAGAGAAAATGTTGTGGTCCTGCTTGGCATC
TAGTGGTACAAGTGATGACTGATTAGTATATAGCACGGAGGAGGAACCTGGGCGATGGCT
GGACCTCATGGTGTTCAGGAATAAAATCTGCTTGCTTTCGTACATTAATTAGTCCGGTGT
GGCAAACATCAATTTGTAGTGCTGTCAATATCTGTTCAATATACGTGCAGCTCAGTTCTG
ACTTGAAAAATGCAGAGTCGTGTTTGCCTGAAACATGTCGTTTCAACCAGTGTTTGATTC
TTTTTCGTTATTTGGTTCAGCATCCGAATTGTGAGTACAGCTCTTCTTGTT