Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039772_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:14469749:14484983:-1 gene:Zm00001d039772 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine carboxypeptidase K10B2.2

Sequence

ATGGCTCCCCTGCGAGCGGGAGCGGCGCCAATGGCGGCGGCCGCCGCCACGGTCGTGCTG
GCCGCCATACTAGTCGCGCTGTTCGGCTGCTGTGCCGCTGCCGCGTCCGCCGCCGCCGCC
ACCGACGTGATCACGGCCGCGGCAGAGCTGGACCGCATCGACAGGCTGCCGGGCCAGCCC
CCAGTCAACTTCTCTATGTACTCCGGCTACGTCACCGTCGACGCCGCCGCGGGTCGGGCG
CTCTTCTACTGGCTCATGGTGGCCTCCGGCGTGCCGGCGGGCTCCGCGCCGCTCGTGCTC
TGGCTCAACGGCGGGCCCGGGTGCTCCTCTCTTGGCTACGGCGCTATGGAGGAGCTCGGC
GCCTTCCGCGTCAACCCCGACGGCGCCACGCTCTCCTTGAATCCCTACGCCTGGAACAAT
GTGGCGAATGTGCTGTTCTTGGACTCGCCGGCCGGCGTTGGCTACTCCTACACCAACACC
ACCGACGACCTGTACGCTGCTGGTGACAACAAGACAGGTAACTTTGGTCTTGCCAATGTA
TTGACATCAGATGATCTTGTGTCTTCTATAAGTATACTTGAAAAATTTTTAGTCTTGCAT
TTATTTGCTGGTGTTTCTTGTTACCGTATTTTCTCCAACAAAGCTCATGACTCATATGCT
TTCTTGATAAATTGGTTGGAACGGTTCCCACAGTACAAGCATCGTGATTTCTACATCACT
GGAGAGAGCTATGGAGGCCACTATGTCCCTCAATTGTCTTGGTTAGTGTACCAAAACAAC
AAAGGAATTAAGAATCCAACCTTAAACTTCAAAGGCTTCATGGTTGGAAATGCGGTAATT
GACGATTACCATGACTACATGGGCACATTTGAGTATTGGTGGACACATGGGCTTATCTCC
GATGAAACTTATGCAAAGTTGTGGGAGGATTGTAAAAATGATGTGTCTGAGAACCCCTCC
GAGGAATGCCAAAAGATTTATGAGGTTGCTGAGGCTGAGCAAGGGAATATTGATTTGTAT
AGCATCTACACACCTACTTGTAAGAAGACTTCATTGCAAAAGCGCAGACTAATAAGGGGA
AGAATGCCCTGGCTGCCGAGAGGATACGATCCTTGCACCGAGCTGTACATCACGAAGTAC
TGCAACTTGCCCGAGGTGCAGGACGCCTTCCATGCCAATGTTACTGGAATACCATACGCC
TGGGTGGGCTGCAGTGACCCAATATATGAGTACTGGAAGGATTCGCCGAGGTCCATGCTT
CCGATCTACCGTGAACTCATCTCGGCAGGCCTAAGGATATGGGTCTTCAGCGGCGACACC
GACTCCGTCGTGCCCCTCACGGCGACGAGGTACTCCATCGACGCGCTGTCTCTGCCAACG
ATCACCAAGTGGTACCCTTGGTACTACGACGAAGAGGTTGGTGGATGGTGCCAGGTGTAC
GAGGGCCTGACGCTGGTGACGGTCCGAGGCGCGGGGCACGAGGTCCCCCTCCACCGTCCG
CCGCAGGGCCTCAAGCTGTTCGAGCACTTCCTGCGGGGCGAGCCCATGCCCAAGCCTGTC
GAGAGCGTCCAGTCGTTCTAG

Peptide Sequence

PEP ID

Zm00001d039772_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:14469749:14484983:-1 gene:Zm00001d039772 transcript:Zm00001d039772_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine carboxypeptidase K10B2.2

Sequence

MAPLRAGAAPMAAAAATVVLAAILVALFGCCAAAASAAAATDVITAAAELDRIDRLPGQP
PVNFSMYSGYVTVDAAAGRALFYWLMVASGVPAGSAPLVLWLNGGPGCSSLGYGAMEELG
AFRVNPDGATLSLNPYAWNNVANVLFLDSPAGVGYSYTNTTDDLYAAGDNKTGNFGLANV
LTSDDLVSSISILEKFLVLHLFAGVSCYRIFSNKAHDSYAFLINWLERFPQYKHRDFYIT
GESYGGHYVPQLSWLVYQNNKGIKNPTLNFKGFMVGNAVIDDYHDYMGTFEYWWTHGLIS
DETYAKLWEDCKNDVSENPSEECQKIYEVAEAEQGNIDLYSIYTPTCKKTSLQKRRLIRG
RMPWLPRGYDPCTELYITKYCNLPEVQDAFHANVTGIPYAWVGCSDPIYEYWKDSPRSML
PIYRELISAGLRIWVFSGDTDSVVPLTATRYSIDALSLPTITKWYPWYYDEEVGGWCQVY
EGLTLVTVRGAGHEVPLHRPPQGLKLFEHFLRGEPMPKPVESVQSF

Transcript Sequence

Transcript ID

Zm00001d039772_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:14469749:14484983:-1 gene:Zm00001d039772 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine carboxypeptidase K10B2.2

Sequence

ATGCCTCAAGGCCTCCACTGTCCACTCCTCACGTACAACCATACCATACCATGCTGTTCG
TTGCTCTGTACGTAGCTCTTCTCCAACTACGTAACGTAACTAGTACGTGTACGTCCAGCA
CTTGGATTGGAATATTGGATGGCTCCCCTGCGAGCGGGAGCGGCGCCAATGGCGGCGGCC
GCCGCCACGGTCGTGCTGGCCGCCATACTAGTCGCGCTGTTCGGCTGCTGTGCCGCTGCC
GCGTCCGCCGCCGCCGCCACCGACGTGATCACGGCCGCGGCAGAGCTGGACCGCATCGAC
AGGCTGCCGGGCCAGCCCCCAGTCAACTTCTCTATGTACTCCGGCTACGTCACCGTCGAC
GCCGCCGCGGGTCGGGCGCTCTTCTACTGGCTCATGGTGGCCTCCGGCGTGCCGGCGGGC
TCCGCGCCGCTCGTGCTCTGGCTCAACGGCGGGCCCGGGTGCTCCTCTCTTGGCTACGGC
GCTATGGAGGAGCTCGGCGCCTTCCGCGTCAACCCCGACGGCGCCACGCTCTCCTTGAAT
CCCTACGCCTGGAACAATGTGGCGAATGTGCTGTTCTTGGACTCGCCGGCCGGCGTTGGC
TACTCCTACACCAACACCACCGACGACCTGTACGCTGCTGGTGACAACAAGACAGGTAAC
TTTGGTCTTGCCAATGTATTGACATCAGATGATCTTGTGTCTTCTATAAGTATACTTGAA
AAATTTTTAGTCTTGCATTTATTTGCTGGTGTTTCTTGTTACCGTATTTTCTCCAACAAA
GCTCATGACTCATATGCTTTCTTGATAAATTGGTTGGAACGGTTCCCACAGTACAAGCAT
CGTGATTTCTACATCACTGGAGAGAGCTATGGAGGCCACTATGTCCCTCAATTGTCTTGG
TTAGTGTACCAAAACAACAAAGGAATTAAGAATCCAACCTTAAACTTCAAAGGCTTCATG
GTTGGAAATGCGGTAATTGACGATTACCATGACTACATGGGCACATTTGAGTATTGGTGG
ACACATGGGCTTATCTCCGATGAAACTTATGCAAAGTTGTGGGAGGATTGTAAAAATGAT
GTGTCTGAGAACCCCTCCGAGGAATGCCAAAAGATTTATGAGGTTGCTGAGGCTGAGCAA
GGGAATATTGATTTGTATAGCATCTACACACCTACTTGTAAGAAGACTTCATTGCAAAAG
CGCAGACTAATAAGGGGAAGAATGCCCTGGCTGCCGAGAGGATACGATCCTTGCACCGAG
CTGTACATCACGAAGTACTGCAACTTGCCCGAGGTGCAGGACGCCTTCCATGCCAATGTT
ACTGGAATACCATACGCCTGGGTGGGCTGCAGTGACCCAATATATGAGTACTGGAAGGAT
TCGCCGAGGTCCATGCTTCCGATCTACCGTGAACTCATCTCGGCAGGCCTAAGGATATGG
GTCTTCAGCGGCGACACCGACTCCGTCGTGCCCCTCACGGCGACGAGGTACTCCATCGAC
GCGCTGTCTCTGCCAACGATCACCAAGTGGTACCCTTGGTACTACGACGAAGAGGTTGGT
GGATGGTGCCAGGTGTACGAGGGCCTGACGCTGGTGACGGTCCGAGGCGCGGGGCACGAG
GTCCCCCTCCACCGTCCGCCGCAGGGCCTCAAGCTGTTCGAGCACTTCCTGCGGGGCGAG
CCCATGCCCAAGCCTGTCGAGAGCGTCCAGTCGTTCTAGATGAGCTTGCTGCCGCGCTTG
GCTAGTTGGCTTTGATGAATAGTAAGGCCGGACATGTGGCAAGCCATCTCCACTCCACAT
TTCTTCACCACGTTTTCAATAACTGGCGCTGGCCGAAATAATAAGAGCAGAACGAATAAA
ATGCCGCTCGCTAGAATGATCTGGCTGTGCGTGTTTGCTTTCGAGTTATTTTTATATACC
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