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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039770_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:14342781:14343560:1 gene:Zm00001d039770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fasciclin-like arabinogalactan protein 11
Sequence

ATGCAGAGACTCGTGCGCGTCCTCGTGGTGCTGGGCGTGGCCGCCGCGGCGTCGGCGCAG
GGCCCGACGGCGGCGCCAACGACGCCCACGCCGGCAACCCCCGCGGCGCCCGCGCCCGCG
ACGGCGTCCAGCAACATCACGGGCGTGCTGGCCAAGGCCGGGCAGTTCAACACCTTCATC
CGGCTGCTCAAGTCCACGGGCGTGGCGTCGCAGATCGACAACCAGGTCGCCAACGGCGGG
AACGGGGTCACGGTGTTCGCGCCCACGGACAACGCGTTCCAGTCGCTGCCCTCGGGCACG
CTCAACTCGCTGTCGGACCAGGACAAGAACGCGCTGGTGCAGTACCACGTGGTGTCCACC
GCCATCCCCATGTCGCAGTTCGACACCGTCAGCAACCCGCTCCGCACGCAGGCCGGCAGC
GCCTCGCCGGGGGAGTTCCCACTCAACGTCACCTCCTCCGAGGGCCAGCAGGTCAACGTC
ACCACGGGCGTCGTCACCGCCACCGTCGACAACTCCCTCTACTCGGGCGACAGCCTCGTC
GTCTACCAGGTCAACAAGGTGCTGCTCCCCATGAAGCTCTTCGGCGCCGCGGAGGCGCCC
GCGCCCGCGCCGCTCGCGCCGGCCAAGAAGAAGGGCAAGACGCCGGCGGCCGTCGCCGAC
TCGCCCGACGCGGCGGAGGCGTCCCCGGACGCCACGACCACGTCGCTCGCGCCCGCGAGG
CTGACGCGGGGTGGCCTCGCCACGGCTCTTGCGCTCGCCGGCGTTTGGTGGGGGCTGTAG

Peptide Sequence

PEP ID

Zm00001d039770_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:14342781:14343560:1 gene:Zm00001d039770 transcript:Zm00001d039770_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fasciclin-like arabinogalactan protein 11
Sequence

MQRLVRVLVVLGVAAAASAQGPTAAPTTPTPATPAAPAPATASSNITGVLAKAGQFNTFI
RLLKSTGVASQIDNQVANGGNGVTVFAPTDNAFQSLPSGTLNSLSDQDKNALVQYHVVST
AIPMSQFDTVSNPLRTQAGSASPGEFPLNVTSSEGQQVNVTTGVVTATVDNSLYSGDSLV
VYQVNKVLLPMKLFGAAEAPAPAPLAPAKKKGKTPAAVADSPDAAEASPDATTTSLAPAR
LTRGGLATALALAGVWWGL

Transcript Sequence

Transcript ID

Zm00001d039770_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:14342781:14343560:1 gene:Zm00001d039770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Fasciclin-like arabinogalactan protein 11
Sequence

ATGCAGAGACTCGTGCGCGTCCTCGTGGTGCTGGGCGTGGCCGCCGCGGCGTCGGCGCAG
GGCCCGACGGCGGCGCCAACGACGCCCACGCCGGCAACCCCCGCGGCGCCCGCGCCCGCG
ACGGCGTCCAGCAACATCACGGGCGTGCTGGCCAAGGCCGGGCAGTTCAACACCTTCATC
CGGCTGCTCAAGTCCACGGGCGTGGCGTCGCAGATCGACAACCAGGTCGCCAACGGCGGG
AACGGGGTCACGGTGTTCGCGCCCACGGACAACGCGTTCCAGTCGCTGCCCTCGGGCACG
CTCAACTCGCTGTCGGACCAGGACAAGAACGCGCTGGTGCAGTACCACGTGGTGTCCACC
GCCATCCCCATGTCGCAGTTCGACACCGTCAGCAACCCGCTCCGCACGCAGGCCGGCAGC
GCCTCGCCGGGGGAGTTCCCACTCAACGTCACCTCCTCCGAGGGCCAGCAGGTCAACGTC
ACCACGGGCGTCGTCACCGCCACCGTCGACAACTCCCTCTACTCGGGCGACAGCCTCGTC
GTCTACCAGGTCAACAAGGTGCTGCTCCCCATGAAGCTCTTCGGCGCCGCGGAGGCGCCC
GCGCCCGCGCCGCTCGCGCCGGCCAAGAAGAAGGGCAAGACGCCGGCGGCCGTCGCCGAC
TCGCCCGACGCGGCGGAGGCGTCCCCGGACGCCACGACCACGTCGCTCGCGCCCGCGAGG
CTGACGCGGGGTGGCCTCGCCACGGCTCTTGCGCTCGCCGGCGTTTGGTGGGGGCTGTAG