Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039769_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:3:14334231:14339628:1 gene:Zm00001d039769 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	ATGGCTCGAAATAATGAGGGCCATCTCGAGCTGCCAGAGATGGATCAAATTCAACCCAAG AACATCCCACACAATGAATCACTGCCTCTAGGCCAGAAGCTTCTCCTGCATCATGGAAGT GATGCGCCCCTTAGAATTGGTCATTCAAGTCATGGAAATATGGGACTTAGAATAAATGAT CTTCCATCTTCAAGTCGCACTGTGCAGACTCTAGGTTATAGAGTTGGGAACCCAGGAACC TCGCATGCTCCCTTTGTTCATTTTCATGCTGGAAGTTCTGGTAGCCATTTACCAGACCCT GCTGTGAATTATCCACATAGGTCTGAGGAAGGCTTCGCTCCAGTGGGTTCCCATATGGAC AACAGAAGGGCTGCAATGAAGCGAAAAGGTCCCAGTGTACACCCTGCAGGGATCAGTGCT ACTGGTTATTATGTTGGAAGTTCTTCCAGTACTCAGCCATCTAACTCTGTGCAGCCAAAT GCAGCTCCACTTGCTGAGCCCTTTCTCCGTCAAATACCTTTAAGCATTGACCAAAGTGGT TGGGATATCCAACACTTGATTCACCAAGAAGGGTTTCAGAGGAATGTGAGAGCACGCCAC AGTAGTATTCCATTAGTACCCAGATCAGCTTCAACATACCCATTAAACATAAACAGTGTT CATGTGCCGTCATTCGGTTCAACCGCAAGTGCTTCCTCAAGTGCACCAGTGGAAATGAAC CAAGTGCCTGTTTCTTTGCCAACAAGAACTCTACCATCAGGTGCACCAGGTATGACTAGC AGGGTCCCAACAGGGAGGGCTTACTATCCTGTGGTTGGAAGCAGCAGCAGCAGCTCAAGT GTTGGTGCTGTCCCAACTATCCACGGATCATCTGGCGCTGCAATGTTTGCTAACGGTGGC TATGTTCCTAGTAGTGTTCATGCTGGAACTGTTCCGATCTTCCCTAACCCAGCGCCTGCT ACTTCATCTGGCTCCAGAGCCATGCCCCACCAGATGGTCATTCAGAGTCATCCAGCTGCT ACTTCCGCAGCAACATCTACATCCATGCGGACCGCCCAACCATCATTACCTGCCAGAACC GCAGCGGCTTCCAGACATGCAAGGCATGTGTCAGCAGGGCTTGCCAACAACGGAAGGTAC AGAAGGGCCAGGAGCTCTTACTACAGGCTTCATCCATTGATGGTAGAGGCAGAGCGGTTC ATGATGGACCACTTGGTCTTCTACGAATCGAGAGCAGCAGCTGCTGACCCCCACAGGGAC ATGAGACTGGACATTGACAACATGAGCTACGAGGACCTGTTGGCTCTGGGAGAAGCTATG GGCAATGTCAACACAGGCCTGGCCGATGAAAAAGTTTCCGAGTGCGTGAAAGAAGTGGTC TGCTGCAGTTCTGACCACACGCAGATGGACCAAGACGACGGAAGCTGCGCCATTTGCCTG GAGGACTACAGAGACAAGGAGGCGCTGGGAATACTCAAGTGCAGGCACGACTTCCACGCC GGCTGCATCAAGAAGTGGCTGCAGACGAAGAACTCGTGCCCGGTGTGCAAAGCGGCCGCG GCCTAG

Peptide Sequence

PEP ID	Zm00001d039769_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:3:14334231:14339628:1 gene:Zm00001d039769 transcript:Zm00001d039769_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	MARNNEGHLELPEMDQIQPKNIPHNESLPLGQKLLLHHGSDAPLRIGHSSHGNMGLRIND LPSSSRTVQTLGYRVGNPGTSHAPFVHFHAGSSGSHLPDPAVNYPHRSEEGFAPVGSHMD NRRAAMKRKGPSVHPAGISATGYYVGSSSSTQPSNSVQPNAAPLAEPFLRQIPLSIDQSG WDIQHLIHQEGFQRNVRARHSSIPLVPRSASTYPLNINSVHVPSFGSTASASSSAPVEMN QVPVSLPTRTLPSGAPGMTSRVPTGRAYYPVVGSSSSSSSVGAVPTIHGSSGAAMFANGG YVPSSVHAGTVPIFPNPAPATSSGSRAMPHQMVIQSHPAATSAATSTSMRTAQPSLPART AAASRHARHVSAGLANNGRYRRARSSYYRLHPLMVEAERFMMDHLVFYESRAAAADPHRD MRLDIDNMSYEDLLALGEAMGNVNTGLADEKVSECVKEVVCCSSDHTQMDQDDGSCAICL EDYRDKEALGILKCRHDFHAGCIKKWLQTKNSCPVCKAAAA

Transcript Sequence

Transcript ID	Zm00001d039769_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:14334231:14339628:1 gene:Zm00001d039769 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	GGGCTGGCAATTCTCTGCTCCCTGCTTCGTTTTCCAGCGGCCACGCACGCGGTCGGGTTG CGTTTGCGTCTCCCCTCCGGCACCCAAGCTTCCGTCACCTCTTCCTTCCCCAAGCCGTCG GTCTCCGCCGCTGGCCTGCCGGGTGGGACTCGGCGTGGGCGCGCCTGGACCGGACCGGAC CCGCCCGCGAGGATGCGGAGATGCTAAGTAGGAATTCTTCTCGGACCTCCACCAAGCACC TGTTATCTGTGTATGCGGAGAAGTTAGATTATTAAGTGCAGTTGGGCCTGACTTGTTTTA TGGCTCGAAATAATGAGGGCCATCTCGAGCTGCCAGAGATGGATCAAATTCAACCCAAGA ACATCCCACACAATGAATCACTGCCTCTAGGCCAGAAGCTTCTCCTGCATCATGGAAGTG ATGCGCCCCTTAGAATTGGTCATTCAAGTCATGGAAATATGGGACTTAGAATAAATGATC TTCCATCTTCAAGTCGCACTGTGCAGACTCTAGGTTATAGAGTTGGGAACCCAGGAACCT CGCATGCTCCCTTTGTTCATTTTCATGCTGGAAGTTCTGGTAGCCATTTACCAGACCCTG CTGTGAATTATCCACATAGGTCTGAGGAAGGCTTCGCTCCAGTGGGTTCCCATATGGACA ACAGAAGGGCTGCAATGAAGCGAAAAGGTCCCAGTGTACACCCTGCAGGGATCAGTGCTA CTGGTTATTATGTTGGAAGTTCTTCCAGTACTCAGCCATCTAACTCTGTGCAGCCAAATG CAGCTCCACTTGCTGAGCCCTTTCTCCGTCAAATACCTTTAAGCATTGACCAAAGTGGTT GGGATATCCAACACTTGATTCACCAAGAAGGGTTTCAGAGGAATGTGAGAGCACGCCACA GTAGTATTCCATTAGTACCCAGATCAGCTTCAACATACCCATTAAACATAAACAGTGTTC ATGTGCCGTCATTCGGTTCAACCGCAAGTGCTTCCTCAAGTGCACCAGTGGAAATGAACC AAGTGCCTGTTTCTTTGCCAACAAGAACTCTACCATCAGGTGCACCAGGTATGACTAGCA GGGTCCCAACAGGGAGGGCTTACTATCCTGTGGTTGGAAGCAGCAGCAGCAGCTCAAGTG TTGGTGCTGTCCCAACTATCCACGGATCATCTGGCGCTGCAATGTTTGCTAACGGTGGCT ATGTTCCTAGTAGTGTTCATGCTGGAACTGTTCCGATCTTCCCTAACCCAGCGCCTGCTA CTTCATCTGGCTCCAGAGCCATGCCCCACCAGATGGTCATTCAGAGTCATCCAGCTGCTA CTTCCGCAGCAACATCTACATCCATGCGGACCGCCCAACCATCATTACCTGCCAGAACCG CAGCGGCTTCCAGACATGCAAGGCATGTGTCAGCAGGGCTTGCCAACAACGGAAGGTACA GAAGGGCCAGGAGCTCTTACTACAGGCTTCATCCATTGATGGTAGAGGCAGAGCGGTTCA TGATGGACCACTTGGTCTTCTACGAATCGAGAGCAGCAGCTGCTGACCCCCACAGGGACA TGAGACTGGACATTGACAACATGAGCTACGAGGACCTGTTGGCTCTGGGAGAAGCTATGG GCAATGTCAACACAGGCCTGGCCGATGAAAAAGTTTCCGAGTGCGTGAAAGAAGTGGTCT GCTGCAGTTCTGACCACACGCAGATGGACCAAGACGACGGAAGCTGCGCCATTTGCCTGG AGGACTACAGAGACAAGGAGGCGCTGGGAATACTCAAGTGCAGGCACGACTTCCACGCCG GCTGCATCAAGAAGTGGCTGCAGACGAAGAACTCGTGCCCGGTGTGCAAAGCGGCCGCGG CCTAGTAGGGAGGGACACGCCAGATGAGGAGGAGGAGGAGCAAGCGACTGTTGCGCTCGA TCCGATTCATTTTTAGGCTCAGGTCAAGATGTATGCCGTCTCATTCTTTTTTTTCCCATC CTCCTAGCCAGGGCAGCCGTGTAAATAGATGCTCTTATGGGATTAACTATTTTCTCTTGG GTTACATTGGCCCAGATTCTTTTGTTGTATTTAACAATAACAACCCAGTTGTGGAAGACT GGAAGGTATTGATCGTCAAGTGGTTATACATTAGTCTCATGTCGGGGTTTTCGGATCCGC CGACACTT