Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039730_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:13142126:13150267:-1 gene:Zm00001d039730 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase alpha
Sequence	ATGGCTGACCGCATTGTAGGTCAAGGTTCTTTTGGGATTGTCTTTGTGGCCAAGTGTTTG GAAACGGGTGAGACTGTTGCCATAAAGAAGGTTCTTCAAGACAAGCGTTACAAGAACCGC GAACTGCAGACCATACGCCTCCTTGACCACCCTAATGTTGTTGCTTTGAAGCATTGCTTC TTTTCAACAACTGAGAAGGATGAGCTTTATCTAAATTTGGTCCTTGATTATGTTCCGAAG ATAGTTCATCGAGTTGTGAAACATCACAACAAGATGCACCAACACATGCCACTTATTTAT GTGAAGCTTTATATGTACCAGATATGTAGAGCATTGGCTTACATTCATGATGAAATTGTT TGGTACTTAGAAATTGATTTTCAAACTTCAGTACAGGTGAACCCACACACCCACCAGCTT AAACTATGTGACTTTGGTAGTGCAAAAGTTCTGGTCAAGGGGGAACCAAACATATCATAC ATCTGCTCGCGATACTATAGGGCTCCAGAGCTCATATTTGGTGCCACTGAGTATACCACA GCGATTGACATTTGGTCTGCTGGTTGTGTTCTTGCTGAGCTTATGCTAGGGCAGGTCCTT GGTACTCCAACAAGGGAAGAAATTAAATGCATGAACCCGAATTGCACAGAGTTTAAGTTC CCACAAATCAAAGCACACCCATGGCACAAGGTATTCAACAAAAGGATGCCGCCAGAAGCT GTTGATCTGGTCTCTCGGCTACTCCAGTACTCCCCAAATCTGAGATGCACTGCTGTGGAG GCGCTTGTCCACCCATTCTTTGACGAGCTTCGAGATCCTAATACTCGTCTTCCAAATGGC CGCTTCCTGCCACCCCTTTTCAACTTCAAGCCTCACGAATTGAAAGGAGTCCCAGCAGAC ATTGTTGCGAGATTGGTTCCAGAACATGCGAAGAAGCAATGCTCTTATGTTGGATCGTGA

Peptide Sequence

PEP ID	Zm00001d039730_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:13142126:13150267:-1 gene:Zm00001d039730 transcript:Zm00001d039730_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase alpha
Sequence	MADRIVGQGSFGIVFVAKCLETGETVAIKKVLQDKRYKNRELQTIRLLDHPNVVALKHCF FSTTEKDELYLNLVLDYVPKIVHRVVKHHNKMHQHMPLIYVKLYMYQICRALAYIHDEIV WYLEIDFQTSVQVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT AIDIWSAGCVLAELMLGQVLGTPTREEIKCMNPNCTEFKFPQIKAHPWHKVFNKRMPPEA VDLVSRLLQYSPNLRCTAVEALVHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPAD IVARLVPEHAKKQCSYVGS

Transcript Sequence

Transcript ID	Zm00001d039730_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:13142126:13150267:-1 gene:Zm00001d039730 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase alpha
Sequence	AAATCGACCGAAACTGGACACATAATTGTCACCACTACTGGTGGCAAGAATGGTCAACCA AAACAGACAGTGAGCTACATGGCTGACCGCATTGTAGGTCAAGGTTCTTTTGGGATTGTC TTTGTGGCCAAGTGTTTGGAAACGGGTGAGACTGTTGCCATAAAGAAGGTTCTTCAAGAC AAGCGTTACAAGAACCGCGAACTGCAGACCATACGCCTCCTTGACCACCCTAATGTTGTT GCTTTGAAGCATTGCTTCTTTTCAACAACTGAGAAGGATGAGCTTTATCTAAATTTGGTC CTTGATTATGTTCCGAAGATAGTTCATCGAGTTGTGAAACATCACAACAAGATGCACCAA CACATGCCACTTATTTATGTGAAGCTTTATATGTACCAGATATGTAGAGCATTGGCTTAC ATTCATGATGAAATTGTTTGGTACTTAGAAATTGATTTTCAAACTTCAGTACAGGTGAAC CCACACACCCACCAGCTTAAACTATGTGACTTTGGTAGTGCAAAAGTTCTGGTCAAGGGG GAACCAAACATATCATACATCTGCTCGCGATACTATAGGGCTCCAGAGCTCATATTTGGT GCCACTGAGTATACCACAGCGATTGACATTTGGTCTGCTGGTTGTGTTCTTGCTGAGCTT ATGCTAGGGCAGGTCCTTGGTACTCCAACAAGGGAAGAAATTAAATGCATGAACCCGAAT TGCACAGAGTTTAAGTTCCCACAAATCAAAGCACACCCATGGCACAAGGTATTCAACAAA AGGATGCCGCCAGAAGCTGTTGATCTGGTCTCTCGGCTACTCCAGTACTCCCCAAATCTG AGATGCACTGCTGTGGAGGCGCTTGTCCACCCATTCTTTGACGAGCTTCGAGATCCTAAT ACTCGTCTTCCAAATGGCCGCTTCCTGCCACCCCTTTTCAACTTCAAGCCTCACGAATTG AAAGGAGTCCCAGCAGACATTGTTGCGAGATTGGTTCCAGAACATGCGAAGAAGCAATGC TCTTATGTTGGATCGTGAGATGACCGTGCCTTGGGACTGGAACCTGAGGTTGCAATCGTG CATTTCCCCTGGTATGTTGGATGATCTTGAGGCATGCGAGCCTGTCGTTGAAGATGCAAG GTTACCTACTTTACGACGTACGCCAATGCGACCTGTGTAGCTGTGAGTAGTCTAATGTTG CAGTGACATGTAATGGCGCACCCCCGTCCTACTAACAGATGCTTACTGGAGATTGCCATA GCTGATCTTGTAATTTGTTATAGGGCAGTATGAATATATTTATGGTAGCTTGAATCTATT TGTGGATTCACTTCGTTTTTCCATGTTTCCTTGTCTCCAGACCTGGACTGGACTGCTATC GGTTTTTGTTTCAGAATTCCTAGCTACCTGTTGCCTAGTGCCTCCCAGCTTGCTCCTGTC GATTATTTGCACACTGGCGATGGTACCTGTTCTTGATTGTTGCCGAAAAACCTTTTGGTT GAGATGTAGTACATTGTTATTTGATCAGTCTGGAAGTATGCTGATTTGATCGCTCTTAT