Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039714_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:12827313:12829202:1 gene:Zm00001d039714 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCCCCGCCGGCGGCGCCCGCCACTAACCGCGTTGCCCTCTACCTCCGCCGCGCGCGC CTCATCGACTCCCTGCGCGTCCGTCTGCGTTCCTCCTCCCCTTCCTCACCTCCTGCGCTC CCACCCGACGACCCCGTGGTCGCGCTCCACGCCATCCGCGCGGCGCCCACGGCGTCCTGC GCGCTCTCCCTTTTTCGCGCGATCCCCTCCCAACCACCGCCGCCGCTCCCACTCTACCAA GCTCTCGCCGCCCGCCTCTCCTCCCTCGCCGCGCTCTCCGACCTCCGCGCCCACCTCGCT TCTTTCCCGCTGCCTGCTCCGCCGCTCGCGCGGCTCCGCCTCCTCGCCGCCGCGGGGGAC CGCGCCTCCGCGCTCGAAGCCTTCGGTTCCCTCCCGGCCACCCCGCGCCGCCCTGCGGAG GCGCACAACGTCGTCATCGAACTCCACGCGCGGGGCGGCGATCATGACGCCGCCGTCGAG GCGTTCCGCCGCATGGTCCGCGAGGGCGCGCTCCCGAATGCACGCACGTACACCGTCGTC ATCGCCCACCTCGCCTCCGCGGGGTTTGTGGACCAGGCGCTCGAGGTGTTCCGCATCCTG CCGTCGCTGCGCGTGCGGCGGACCACCCGACAGTACAACGTGCTCGCCGAGGCGCTTGCG TCGGGAGGTAGGTTTGACCAGCTTCGGTGGCTCGTCCGCGAGATGGCGGCTGTGGACGGC GTCATGCCCGGGCCGCAGATGCGCGCTGCCATCGCTGCCCTGCGGGAGGCTGGTCACGTT GATGGCACAAAGGATTTCGTCGAGGAGCTTTCACCCAACGCAAGGATCGGGTACGCCGTG GACGACGTCGAGGGTGAGGGAGACGGCGAGGAGGAGGACGACGACGACGAGGACGAAGGC GAGGTCAAGGACAGAGGCAACGGAGAGAAGCAAACACTGAAGCCATGGCTGGACCCGCGT GAGCTCGCCAGGGCGTTGGACGGCTGGGACTCGCGGGAGGTGGCCGAGCTAGAGGGTGCC GGGCTCGTCTGGACGCCGCGGCTGGTATGCAAGCTCCTGCGAGCATTCAAGAAAGCCGAG ACAGCGTGGGAGTTCTTCTGCTGGGTGGCGTGCCGCCCCGGTGGGTTCGCGCACGACCGC CACACCGTGGCGAGGATGATGGCGATCCTCGCCCGCACCGGCCACGTCGAGCTGGTGGAG CGCCTGCTCGCTAAGGTGCGTGCCGACGGCATCCTCCTCCCGCTTGCCACGGTGCGGCTC GTCATCGACTTCTACGGCCTCTCCAAGAAGGCCGACGCGGCGGTCAGGGTGTTCCAGGAG GCTGAGTCAATCTGCGGCCCCATCTCGGGGCCCAACCTTGCGCTGCTCTACTCGTCTCTT CTGCGGACGATGACGAAGTGCCGGAGAGGGCCCGACGCCATGGACCTCCTCGAGGAGATG ATGGCGCGAGGCGTGCTCCCGGACCTGCAGACCTTCTCCGGCCTGATGGAGCACCTTGCT GGCGCCGGCGACCTCAAGGGCGTGCACCGGCTGCTCGGTCTGGTCCGGCAGTGCGAGCTG CAGCCCGACGGATACATGTACAGCGTGCTGGTCCGGGCATACTGCAAGCGGGAGCGTGCG GCGCTCGCGCTGAGGGTGTTTGACGAAATGCGCGCCGCAGGGGTCACCCCCGACGCACCC ACCAAGGCACTGCTGGTGAAGAGCCTGTGGCGGGAGGGGAAGCTCCGAGAGGCGGCGCTG GTGGAGGAAAGGTGCAATGATGTAGTGGATGGCCTTCCAGATGTGTCACCGGGGCATGTG TGGACGGCCAGCGCCGCGGACTTGAAGAAGGTGCTCGACATTTACTCCGGCTGCCTGGAT CAACCTGCTGCTCAGACTTCAACGGGGTGA

Peptide Sequence

PEP ID	Zm00001d039714_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:12827313:12829202:1 gene:Zm00001d039714 transcript:Zm00001d039714_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPPPAAPATNRVALYLRRARLIDSLRVRLRSSSPSSPPALPPDDPVVALHAIRAAPTASC ALSLFRAIPSQPPPPLPLYQALAARLSSLAALSDLRAHLASFPLPAPPLARLRLLAAAGD RASALEAFGSLPATPRRPAEAHNVVIELHARGGDHDAAVEAFRRMVREGALPNARTYTVV IAHLASAGFVDQALEVFRILPSLRVRRTTRQYNVLAEALASGGRFDQLRWLVREMAAVDG VMPGPQMRAAIAALREAGHVDGTKDFVEELSPNARIGYAVDDVEGEGDGEEEDDDDEDEG EVKDRGNGEKQTLKPWLDPRELARALDGWDSREVAELEGAGLVWTPRLVCKLLRAFKKAE TAWEFFCWVACRPGGFAHDRHTVARMMAILARTGHVELVERLLAKVRADGILLPLATVRL VIDFYGLSKKADAAVRVFQEAESICGPISGPNLALLYSSLLRTMTKCRRGPDAMDLLEEM MARGVLPDLQTFSGLMEHLAGAGDLKGVHRLLGLVRQCELQPDGYMYSVLVRAYCKRERA ALALRVFDEMRAAGVTPDAPTKALLVKSLWREGKLREAALVEERCNDVVDGLPDVSPGHV WTASAADLKKVLDIYSGCLDQPAAQTSTG

Transcript Sequence

Transcript ID	Zm00001d039714_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:12827313:12829202:1 gene:Zm00001d039714 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCCCCGCCGGCGGCGCCCGCCACTAACCGCGTTGCCCTCTACCTCCGCCGCGCGCGC CTCATCGACTCCCTGCGCGTCCGTCTGCGTTCCTCCTCCCCTTCCTCACCTCCTGCGCTC CCACCCGACGACCCCGTGGTCGCGCTCCACGCCATCCGCGCGGCGCCCACGGCGTCCTGC GCGCTCTCCCTTTTTCGCGCGATCCCCTCCCAACCACCGCCGCCGCTCCCACTCTACCAA GCTCTCGCCGCCCGCCTCTCCTCCCTCGCCGCGCTCTCCGACCTCCGCGCCCACCTCGCT TCTTTCCCGCTGCCTGCTCCGCCGCTCGCGCGGCTCCGCCTCCTCGCCGCCGCGGGGGAC CGCGCCTCCGCGCTCGAAGCCTTCGGTTCCCTCCCGGCCACCCCGCGCCGCCCTGCGGAG GCGCACAACGTCGTCATCGAACTCCACGCGCGGGGCGGCGATCATGACGCCGCCGTCGAG GCGTTCCGCCGCATGGTCCGCGAGGGCGCGCTCCCGAATGCACGCACGTACACCGTCGTC ATCGCCCACCTCGCCTCCGCGGGGTTTGTGGACCAGGCGCTCGAGGTGTTCCGCATCCTG CCGTCGCTGCGCGTGCGGCGGACCACCCGACAGTACAACGTGCTCGCCGAGGCGCTTGCG TCGGGAGGTAGGTTTGACCAGCTTCGGTGGCTCGTCCGCGAGATGGCGGCTGTGGACGGC GTCATGCCCGGGCCGCAGATGCGCGCTGCCATCGCTGCCCTGCGGGAGGCTGGTCACGTT GATGGCACAAAGGATTTCGTCGAGGAGCTTTCACCCAACGCAAGGATCGGGTACGCCGTG GACGACGTCGAGGGTGAGGGAGACGGCGAGGAGGAGGACGACGACGACGAGGACGAAGGC GAGGTCAAGGACAGAGGCAACGGAGAGAAGCAAACACTGAAGCCATGGCTGGACCCGCGT GAGCTCGCCAGGGCGTTGGACGGCTGGGACTCGCGGGAGGTGGCCGAGCTAGAGGGTGCC GGGCTCGTCTGGACGCCGCGGCTGGTATGCAAGCTCCTGCGAGCATTCAAGAAAGCCGAG ACAGCGTGGGAGTTCTTCTGCTGGGTGGCGTGCCGCCCCGGTGGGTTCGCGCACGACCGC CACACCGTGGCGAGGATGATGGCGATCCTCGCCCGCACCGGCCACGTCGAGCTGGTGGAG CGCCTGCTCGCTAAGGTGCGTGCCGACGGCATCCTCCTCCCGCTTGCCACGGTGCGGCTC GTCATCGACTTCTACGGCCTCTCCAAGAAGGCCGACGCGGCGGTCAGGGTGTTCCAGGAG GCTGAGTCAATCTGCGGCCCCATCTCGGGGCCCAACCTTGCGCTGCTCTACTCGTCTCTT CTGCGGACGATGACGAAGTGCCGGAGAGGGCCCGACGCCATGGACCTCCTCGAGGAGATG ATGGCGCGAGGCGTGCTCCCGGACCTGCAGACCTTCTCCGGCCTGATGGAGCACCTTGCT GGCGCCGGCGACCTCAAGGGCGTGCACCGGCTGCTCGGTCTGGTCCGGCAGTGCGAGCTG CAGCCCGACGGATACATGTACAGCGTGCTGGTCCGGGCATACTGCAAGCGGGAGCGTGCG GCGCTCGCGCTGAGGGTGTTTGACGAAATGCGCGCCGCAGGGGTCACCCCCGACGCACCC ACCAAGGCACTGCTGGTGAAGAGCCTGTGGCGGGAGGGGAAGCTCCGAGAGGCGGCGCTG GTGGAGGAAAGGTGCAATGATGTAGTGGATGGCCTTCCAGATGTGTCACCGGGGCATGTG TGGACGGCCAGCGCCGCGGACTTGAAGAAGGTGCTCGACATTTACTCCGGCTGCCTGGAT CAACCTGCTGCTCAGACTTCAACGGGGTGA