Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039698_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:12378113:12379918:1 gene:Zm00001d039698 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:asg48a description:cytochrome P450 family 706 subfamily A polypeptide 5
Sequence

ATGGAGGCCACGGCACCAGCAAACCTTTTCTACGCTGCTTTCCTTTTTCTGTCGGTACTG
TATCTCGCCGTCACCCGGCGCCGCACCAGCCGCCTGCCGCCTGGACCGACGGGCCTACCG
CTTGTGGGCAGCCTCCCTTTCCTCGACCGGAACCTACACGCCTGCTTCGCTGGCCTCGCC
GCGAAGTACGGTCCTGTCTTCGCCATCCGTCTGGGCTCCAAGGTGGAAATCGTTGTCACC
TCCCCGGAGCTGGCCCACGAGGTCCTCCGTGACAAGGACCCTGTCTTCTCCAACCGCGTC
ATCCCCGACGCCGGCCGCGCGGTGGCGTTCGACGGCGTGGAGAACATCGTGGGCGTCCCG
GTCGGACCCAAGTGGCGCCTGCTCCGGCGCCTCTGCGCGCAGGAGATGCTGAGCCCCGCA
GGCCTCGACAGCCTGTACGGCCTTCGCCGGCGCGAGTTCAGGTCTACCCTGCGCTACCTC
TACTCCCAGTCCCAGGCCGGCGAGCCGGTGGACCTCGGCGCCCTGATGTTCGTCAACATG
ATGAACGTGGTCACCAGCACCCTCTGGGGTGGCACCATCGGGAGCGAGAGCGAGCGAGCT
GCCATAGGGAAGGAGTTCAGGGCACTCGTCGCCAAGTTGACCGAGCTCCTCGGCACGCCC
AACCTATCCGACTTCTTTCCGGTGCTAGCGCCGTTCGACCTGCAGGGCGTCCGGAAGAAG
ATGGAGCGGATCAGGGTGCGCTTCGACCAGATATTCGACAAGATCATCCAGCAGAGGGTG
AACGCCCAGCAGGACGGCAGCAAGATGGCCACTGACTTCCTCGAGTGCATGCTCAAGATG
GAGAGGGAAGGCGGGGACGGCAAGGCCACCTTCACTATGACTGACGTCAAGTCTCTGCTC
CTGGACATGGTGGTCGCCGGGACGGAGACCATGTCAAATACCGTGGAATGGGCCATCGCA
GAGATGCTGCAGAAACCTGAGGTTCTTCGGAAGGTGCAAGAAGAGCTCGACAAGGTGGTG
TCCAGGGACGCCATCGTGGAGGAGTCCCAGCTTCCTGAGCTCCGCTACCTCCGGATGGTG
ATCAAGGAAACGCTCCGGCTGCACCCAGCACTGCCCCTCATGGTGCCGCACTCCCCGAGC
GAAGAGTCCACGATCGGCGGGTTCCACGTCCCGGCCGGCTGCCGCGTCTTCGTCAACGTC
TGGGCCATCCACAGGAACCCCCTGGTGTGGAGCGAGCCTCTCGAGTTCAACCCCGAGAGG
TTCAGCGGGGACGACGACGGCCGCAGGTGGGATTTCACGGGCAGACAGTTCGACTACCTC
CCCTTCGGGTCCGGGAGGAGGATCTGCGCCGGCATCGCCATGGCCGACAAGATGACTACG
TACTCGCTGGCCATGCTGCTGCAGGCGTTCGACTGGAAGCTGCCGCAGGGTACCGAGCTG
GACCTATCCGAGAAGTTCGGAGTCGTGATGAAGAAGGCTACGCCACTGATGGTCATACCC
AAGTCAAGGTTCCCTAAGCCCGATCTGTATTGTTCCTGA

Peptide Sequence

PEP ID

Zm00001d039698_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:12378113:12379918:1 gene:Zm00001d039698 transcript:Zm00001d039698_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:asg48a description:cytochrome P450 family 706 subfamily A polypeptide 5
Sequence

MEATAPANLFYAAFLFLSVLYLAVTRRRTSRLPPGPTGLPLVGSLPFLDRNLHACFAGLA
AKYGPVFAIRLGSKVEIVVTSPELAHEVLRDKDPVFSNRVIPDAGRAVAFDGVENIVGVP
VGPKWRLLRRLCAQEMLSPAGLDSLYGLRRREFRSTLRYLYSQSQAGEPVDLGALMFVNM
MNVVTSTLWGGTIGSESERAAIGKEFRALVAKLTELLGTPNLSDFFPVLAPFDLQGVRKK
MERIRVRFDQIFDKIIQQRVNAQQDGSKMATDFLECMLKMEREGGDGKATFTMTDVKSLL
LDMVVAGTETMSNTVEWAIAEMLQKPEVLRKVQEELDKVVSRDAIVEESQLPELRYLRMV
IKETLRLHPALPLMVPHSPSEESTIGGFHVPAGCRVFVNVWAIHRNPLVWSEPLEFNPER
FSGDDDGRRWDFTGRQFDYLPFGSGRRICAGIAMADKMTTYSLAMLLQAFDWKLPQGTEL
DLSEKFGVVMKKATPLMVIPKSRFPKPDLYCS

Transcript Sequence

Transcript ID

Zm00001d039698_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:12378113:12379918:1 gene:Zm00001d039698 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:asg48a description:cytochrome P450 family 706 subfamily A polypeptide 5
Sequence

GCCACTACGAACTACGACTCGATCGCAAGCTTCCCCAGTAGCCATGGAGGCCACGGCACC
AGCAAACCTTTTCTACGCTGCTTTCCTTTTTCTGTCGGTACTGTATCTCGCCGTCACCCG
GCGCCGCACCAGCCGCCTGCCGCCTGGACCGACGGGCCTACCGCTTGTGGGCAGCCTCCC
TTTCCTCGACCGGAACCTACACGCCTGCTTCGCTGGCCTCGCCGCGAAGTACGGTCCTGT
CTTCGCCATCCGTCTGGGCTCCAAGGTGGAAATCGTTGTCACCTCCCCGGAGCTGGCCCA
CGAGGTCCTCCGTGACAAGGACCCTGTCTTCTCCAACCGCGTCATCCCCGACGCCGGCCG
CGCGGTGGCGTTCGACGGCGTGGAGAACATCGTGGGCGTCCCGGTCGGACCCAAGTGGCG
CCTGCTCCGGCGCCTCTGCGCGCAGGAGATGCTGAGCCCCGCAGGCCTCGACAGCCTGTA
CGGCCTTCGCCGGCGCGAGTTCAGGTCTACCCTGCGCTACCTCTACTCCCAGTCCCAGGC
CGGCGAGCCGGTGGACCTCGGCGCCCTGATGTTCGTCAACATGATGAACGTGGTCACCAG
CACCCTCTGGGGTGGCACCATCGGGAGCGAGAGCGAGCGAGCTGCCATAGGGAAGGAGTT
CAGGGCACTCGTCGCCAAGTTGACCGAGCTCCTCGGCACGCCCAACCTATCCGACTTCTT
TCCGGTGCTAGCGCCGTTCGACCTGCAGGGCGTCCGGAAGAAGATGGAGCGGATCAGGGT
GCGCTTCGACCAGATATTCGACAAGATCATCCAGCAGAGGGTGAACGCCCAGCAGGACGG
CAGCAAGATGGCCACTGACTTCCTCGAGTGCATGCTCAAGATGGAGAGGGAAGGCGGGGA
CGGCAAGGCCACCTTCACTATGACTGACGTCAAGTCTCTGCTCCTGGACATGGTGGTCGC
CGGGACGGAGACCATGTCAAATACCGTGGAATGGGCCATCGCAGAGATGCTGCAGAAACC
TGAGGTTCTTCGGAAGGTGCAAGAAGAGCTCGACAAGGTGGTGTCCAGGGACGCCATCGT
GGAGGAGTCCCAGCTTCCTGAGCTCCGCTACCTCCGGATGGTGATCAAGGAAACGCTCCG
GCTGCACCCAGCACTGCCCCTCATGGTGCCGCACTCCCCGAGCGAAGAGTCCACGATCGG
CGGGTTCCACGTCCCGGCCGGCTGCCGCGTCTTCGTCAACGTCTGGGCCATCCACAGGAA
CCCCCTGGTGTGGAGCGAGCCTCTCGAGTTCAACCCCGAGAGGTTCAGCGGGGACGACGA
CGGCCGCAGGTGGGATTTCACGGGCAGACAGTTCGACTACCTCCCCTTCGGGTCCGGGAG
GAGGATCTGCGCCGGCATCGCCATGGCCGACAAGATGACTACGTACTCGCTGGCCATGCT
GCTGCAGGCGTTCGACTGGAAGCTGCCGCAGGGTACCGAGCTGGACCTATCCGAGAAGTT
CGGAGTCGTGATGAAGAAGGCTACGCCACTGATGGTCATACCCAAGTCAAGGTTCCCTAA
GCCCGATCTGTATTGTTCCTGAGCAAGACCTCAGATATCATCGTGTCGATCTTTCCCACA
AACGCTGTCAAATAATCCTGATATATACCCAGAACCGTTCTATATTGTACTCCTTCCGTA
ATTTGCTTGGGTGAGTACAGTAAACGTGTGGTACAGT