Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039682_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:11808891:11813841:1 gene:Zm00001d039682 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carboxyl-terminal proteinase
Sequence	ATGGCTGCCGCTCCTCCTCCTTGTAGCAGCTGCAGTTGCAGTTGCCGTATCCGCGGCAGG AAGCAGGCGCCCGCCCGACGAGCCCTCCCAACCGTCGCCTCCCTTGTCCCCTGCTTCCTG CTGCTCCTCCTCGTCGTCGCCTCGTGCCAGCCCGCCCTGGTCTCCGCGGCGCACGGCGGC GGTGGCGGCGGCGGCAGGAAGCACGCCGCCGCCGCCGCGCGGGCGCATGCGCATGCGCAG CAGACGCTCTTCCGTGCCGCGGGGGACGAGCGCGAGGAGGCGTACAGGAGGGTCATGGCT CGCATGGCCAGGATGGACAGGGACTCCAACATGACAATCCAGAGCCCCGACGGAGACGTC ATCCGCTGCGTGCCGTCGCACCTCCAGCCGGCCTTCGACCACCCCGTGCTCAGAGGCCAG AAGCCCGAGGACGAGCCCGTGGAGAGGCCCATGCCGCCGAAGCGCGTCGGCGGCGCTGCC GAGGAGGAGGAGGACGACGACGTGTTCCCGCAGGCGTGGAGCGACGGCGGCAAGCGGTGC CCGGAGGGGACGGTGCCGATACGGCGGACGACGGCGCGCGACGTGCTGCGCGCCAGCTCC GCCCGGCGGTTCGGGATGAAGGCCCGGGCCAGCCACCACGCCCGCCGCGACTCGACCAGC AGCGGCCACGAGCACGCGGTGGGGTACGTGACGGGGGACCAGTTCTACGGCGCCAAGGCC AGCCTGAACGTGTGGTCCGCCAAGGTGGCGTCGGCGGCGGAGTTCAGCCTCTCCCAGATC TGGGTCATCTCCGGCTCCTTCGGCAACGACCTCAACACCGTCGAGGCCGGATGGCAGGTG AGCCCTGAACTGTACGGAGATAGCAGCCCCAGGTTCTTCACATATTGGACGACCGACGCA TACCAGGAGACCGGGTGCTACAACCTGCACTGCTCCGGCTTCGTCCAGACGAACAACCGG ATCGCCATTGGAGCCGCTATCTCGCCGACCTCGGTCTACAACGGCCGGCAGTTCGACATC AGCCTGCTCATATGGAAGGACCCACACCGGGGGAACTGGTGGCTGCAGCTGGGGTCGACG GGTCAGCTGGTGGGGTACTGGCCGTCGTTCCTGTTCACGCACCTGGGCGGGCACGCCAAC ATGGTGCAGTTCGGCGGCGAGGTGGTGAACTCGCGGCCGTCGGGGTCGCACACGCCCACG CAGATGGGGAGTGGGCACTTCCCCCGCGAGGGCTCCAACCGCGCCGCCTACTTCCGCAAC GTGCAGGTGGTGGACGGCGACAACAGCCTCGTCCCCGCCGCCGCGCTCCGCCTCGTCGCC GACCACCCGGCCTGCTACGACATCCAGGGCGGCTACAACCGCGCCTGGGGAAACTACTTC TACTACGGAGGGCCTGGCAGGAACGTGCACTGCCCGTGA

Peptide Sequence

PEP ID	Zm00001d039682_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:11808891:11813841:1 gene:Zm00001d039682 transcript:Zm00001d039682_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carboxyl-terminal proteinase
Sequence	MAAAPPPCSSCSCSCRIRGRKQAPARRALPTVASLVPCFLLLLLVVASCQPALVSAAHGG GGGGGRKHAAAAARAHAHAQQTLFRAAGDEREEAYRRVMARMARMDRDSNMTIQSPDGDV IRCVPSHLQPAFDHPVLRGQKPEDEPVERPMPPKRVGGAAEEEEDDDVFPQAWSDGGKRC PEGTVPIRRTTARDVLRASSARRFGMKARASHHARRDSTSSGHEHAVGYVTGDQFYGAKA SLNVWSAKVASAAEFSLSQIWVISGSFGNDLNTVEAGWQVSPELYGDSSPRFFTYWTTDA YQETGCYNLHCSGFVQTNNRIAIGAAISPTSVYNGRQFDISLLIWKDPHRGNWWLQLGST GQLVGYWPSFLFTHLGGHANMVQFGGEVVNSRPSGSHTPTQMGSGHFPREGSNRAAYFRN VQVVDGDNSLVPAAALRLVADHPACYDIQGGYNRAWGNYFYYGGPGRNVHCP

Transcript Sequence

Transcript ID	Zm00001d039682_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:11808891:11813841:1 gene:Zm00001d039682 gene_biotype:protein_coding transcript_biotype:protein_coding description:Carboxyl-terminal proteinase
Sequence	GCTCGCTCCTGGGGAGGGAAGAAGAGGACAAGCAGGCACTACTACGCCAATGCGCGAGCG TGCCGACAGCTCCAGAGGAGGAAGAAGAGGTGGTGGGAGTGGGAGTGGGATACAGACAAC GGGCGCCGACCGCGACGACGCCGCCGCCGCCGCTCCCTCCTCCTCGTGCTCCTGCTACGA AGCATTAACAATCCGAGGTCGTCGGTCCGTCCATGGCTGCCGCTCCTCCTCCTTGTAGCA GCTGCAGTTGCAGTTGCCGTATCCGCGGCAGGAAGCAGGCGCCCGCCCGACGAGCCCTCC CAACCGTCGCCTCCCTTGTCCCCTGCTTCCTGCTGCTCCTCCTCGTCGTCGCCTCGTGCC AGCCCGCCCTGGTCTCCGCGGCGCACGGCGGCGGTGGCGGCGGCGGCAGGAAGCACGCCG CCGCCGCCGCGCGGGCGCATGCGCATGCGCAGCAGACGCTCTTCCGTGCCGCGGGGGACG AGCGCGAGGAGGCGTACAGGAGGGTCATGGCTCGCATGGCCAGGATGGACAGGGACTCCA ACATGACAATCCAGAGCCCCGACGGAGACGTCATCCGCTGCGTGCCGTCGCACCTCCAGC CGGCCTTCGACCACCCCGTGCTCAGAGGCCAGAAGCCCGAGGACGAGCCCGTGGAGAGGC CCATGCCGCCGAAGCGCGTCGGCGGCGCTGCCGAGGAGGAGGAGGACGACGACGTGTTCC CGCAGGCGTGGAGCGACGGCGGCAAGCGGTGCCCGGAGGGGACGGTGCCGATACGGCGGA CGACGGCGCGCGACGTGCTGCGCGCCAGCTCCGCCCGGCGGTTCGGGATGAAGGCCCGGG CCAGCCACCACGCCCGCCGCGACTCGACCAGCAGCGGCCACGAGCACGCGGTGGGGTACG TGACGGGGGACCAGTTCTACGGCGCCAAGGCCAGCCTGAACGTGTGGTCCGCCAAGGTGG CGTCGGCGGCGGAGTTCAGCCTCTCCCAGATCTGGGTCATCTCCGGCTCCTTCGGCAACG ACCTCAACACCGTCGAGGCCGGATGGCAGGTGAGCCCTGAACTGTACGGAGATAGCAGCC CCAGGTTCTTCACATATTGGACGACCGACGCATACCAGGAGACCGGGTGCTACAACCTGC ACTGCTCCGGCTTCGTCCAGACGAACAACCGGATCGCCATTGGAGCCGCTATCTCGCCGA CCTCGGTCTACAACGGCCGGCAGTTCGACATCAGCCTGCTCATATGGAAGGACCCACACC GGGGGAACTGGTGGCTGCAGCTGGGGTCGACGGGTCAGCTGGTGGGGTACTGGCCGTCGT TCCTGTTCACGCACCTGGGCGGGCACGCCAACATGGTGCAGTTCGGCGGCGAGGTGGTGA ACTCGCGGCCGTCGGGGTCGCACACGCCCACGCAGATGGGGAGTGGGCACTTCCCCCGCG AGGGCTCCAACCGCGCCGCCTACTTCCGCAACGTGCAGGTGGTGGACGGCGACAACAGCC TCGTCCCCGCCGCCGCGCTCCGCCTCGTCGCCGACCACCCGGCCTGCTACGACATCCAGG GCGGCTACAACCGCGCCTGGGGAAACTACTTCTACTACGGAGGGCCTGGCAGGAACGTGC ACTGCCCGTGATACATGATCCGGCCGGCGACCATGCATGCATGGCGATGGCATGAACTGA ATGAACGAAGAAGCAGATACGTGCACAGATACATATATATATATATACTACTACAGAGAT TCAGAGACGGATCACAGTATGCGGCCGTGCCGGAGGATTGATCTCTAGTGGGATCGTCGT CGCCGCTCATCAACCGGACATGGATCCTATATATATAGGAGCGGTGCTAGTCGTTATAGC TTAGCCATAGTCCCTCGTTTGGTTACTGCGCATGCTAATGAGTAATGAGTTTTTAGTCGC CCAGCCCAGCTGCGTACACGCGCGCCGCCGGCCGGGCCGGTAGTAGCACAGGCAAAAGGT TTCGATTTGATGTATGTGAGGCTTCTTTCGTTTGCATCGGTCTGATTTTTTTTTGTCTTG AGTTCTGTATACATGAAGAAATCCACAGAGTATTTTGAT