Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039679_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:11768181:11769740:-1 gene:Zm00001d039679 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGTCCCACGGCCACGTAGATGCTGTTCTCCTCTCCCTCGCTAGGCACCCCCACGCCTCC CCCGAGCCCGTCGCCAGGAACGCCCTCGCCTTCTTCCATTGGTCCACTGCCGCAGCCGCT TCGTCCTCTTCCCCGCCGCCGCCGCCGTCCTCGCACTCGCTACGGTCCTACTGCCTCCTC GTCCACCTCCTCTCCCGCGCCGCGCTCTTCCGCGATGCCTCCGTCCTCCTCGAATCAGCC ATTTCCAAGCACCAATCGTCTTTGTTCTCCGCTTCGTGCTTCCTCGACGCCTTCTTCGCT GCCTACGAGGACAGCGGCACGGCCGCCACGACCCGCGGCCTACACCTCCTGGTTCACGCC TACGCGCGGCTGCGCCTCCCGGGGGAGGCCCTCGAGGCCTGCCGCTACCTCGCGCGGCGT GGCGTGCTGCCCTCCCTTTCTGCTTTCAACGCCGCGCTGCACGCGGCGCAGCGCGCTGGG TCGTTCGATGTCGCATGGGATGTGTTCGAGCTTATGACGCAGAAGCGGATGTATGCCAAC CAGAGCACAATCGAGCTTGTCATCGGCGTCCTGAGCCGGGAAGGCAAGCTCGCCAAGACC GTGGCCCTCGTGGAGAGGATCCACGGTAAGAAGTGTGCGCCTGGCATTGTGGCGCACGTG GCACTCACGTTGAGGATGATCGAGGAAAACAGGGTGGAACAGGTGATATTGCTGCTGAAG AGGATGCTGCAGAGGAACATTCTCCTCGACGACATTGCTTACTCACTGATCGTGCATGCC TACTGCCACATTGGTGATGCCAAGTCGGCACTCGAGCAATGTGATGACATGGTTTGTCGT GGTCGTCGCCTGAACGCATTCGTGTACACTTGCCTCATCAGAGCGCATTGCTGTGAAGGC AGTATGGACAAGGCTGCCCGGTGTCTCCAAGAAATGTTATCCATGGGAACAAAGCCGTAT GATGAGACGTACAACCATCTCATTGCTGGTTGTTTCAGACAAGGGATGATAAAGGAAGGC TTGGCCTATTTTGACAACATGCACGAGGAAGGTTTTGTGCTGGACATTGGCAGCTGCAAT AAGATGCTAGAGGGACTCTGCAGTTCAGGAGAGGTTCGCAAGGCGAACAACCTGCTGACG GCAATGATGGACAAAGGACTTCTTCCTGATAAGGATACATACTTGAGCCTTATTAATGGA TATGGTAAGGTTGGTGATGCCCAATGTATTGTCAACATCTACCATGAGATGGAACACAGA AGGCTTGATCCCGGTGTTGAGGTTTTTACTGCCTTGATCAAGGGTCTTTGCCGGTGTGGG AATCTGAAGGAAGCTGAGAAACTCTTTGCGGCGATGAAGAAGAAAACGTTGGCTTCGACT AGTGACTTGTATGATATGCTTATCAGCGGTTACTGTGAGAAGCGCAATGCTAAGAGGGCA CTTTGGTTGTATGATAAGATGATGACAGAGAACGAGAAGCTTGTTCCTTCCCCTGAAACT TTCATGATGCTCGTAAGGAGAGTCATCAAAGTCAAGAATACATATTCCCCTGATAGCTGA

Peptide Sequence

PEP ID	Zm00001d039679_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:11768181:11769740:-1 gene:Zm00001d039679 transcript:Zm00001d039679_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MSHGHVDAVLLSLARHPHASPEPVARNALAFFHWSTAAAASSSSPPPPPSSHSLRSYCLL VHLLSRAALFRDASVLLESAISKHQSSLFSASCFLDAFFAAYEDSGTAATTRGLHLLVHA YARLRLPGEALEACRYLARRGVLPSLSAFNAALHAAQRAGSFDVAWDVFELMTQKRMYAN QSTIELVIGVLSREGKLAKTVALVERIHGKKCAPGIVAHVALTLRMIEENRVEQVILLLK RMLQRNILLDDIAYSLIVHAYCHIGDAKSALEQCDDMVCRGRRLNAFVYTCLIRAHCCEG SMDKAARCLQEMLSMGTKPYDETYNHLIAGCFRQGMIKEGLAYFDNMHEEGFVLDIGSCN KMLEGLCSSGEVRKANNLLTAMMDKGLLPDKDTYLSLINGYGKVGDAQCIVNIYHEMEHR RLDPGVEVFTALIKGLCRCGNLKEAEKLFAAMKKKTLASTSDLYDMLISGYCEKRNAKRA LWLYDKMMTENEKLVPSPETFMMLVRRVIKVKNTYSPDS

Transcript Sequence

Transcript ID	Zm00001d039679_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:11768181:11769740:-1 gene:Zm00001d039679 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGTCCCACGGCCACGTAGATGCTGTTCTCCTCTCCCTCGCTAGGCACCCCCACGCCTCC CCCGAGCCCGTCGCCAGGAACGCCCTCGCCTTCTTCCATTGGTCCACTGCCGCAGCCGCT TCGTCCTCTTCCCCGCCGCCGCCGCCGTCCTCGCACTCGCTACGGTCCTACTGCCTCCTC GTCCACCTCCTCTCCCGCGCCGCGCTCTTCCGCGATGCCTCCGTCCTCCTCGAATCAGCC ATTTCCAAGCACCAATCGTCTTTGTTCTCCGCTTCGTGCTTCCTCGACGCCTTCTTCGCT GCCTACGAGGACAGCGGCACGGCCGCCACGACCCGCGGCCTACACCTCCTGGTTCACGCC TACGCGCGGCTGCGCCTCCCGGGGGAGGCCCTCGAGGCCTGCCGCTACCTCGCGCGGCGT GGCGTGCTGCCCTCCCTTTCTGCTTTCAACGCCGCGCTGCACGCGGCGCAGCGCGCTGGG TCGTTCGATGTCGCATGGGATGTGTTCGAGCTTATGACGCAGAAGCGGATGTATGCCAAC CAGAGCACAATCGAGCTTGTCATCGGCGTCCTGAGCCGGGAAGGCAAGCTCGCCAAGACC GTGGCCCTCGTGGAGAGGATCCACGGTAAGAAGTGTGCGCCTGGCATTGTGGCGCACGTG GCACTCACGTTGAGGATGATCGAGGAAAACAGGGTGGAACAGGTGATATTGCTGCTGAAG AGGATGCTGCAGAGGAACATTCTCCTCGACGACATTGCTTACTCACTGATCGTGCATGCC TACTGCCACATTGGTGATGCCAAGTCGGCACTCGAGCAATGTGATGACATGGTTTGTCGT GGTCGTCGCCTGAACGCATTCGTGTACACTTGCCTCATCAGAGCGCATTGCTGTGAAGGC AGTATGGACAAGGCTGCCCGGTGTCTCCAAGAAATGTTATCCATGGGAACAAAGCCGTAT GATGAGACGTACAACCATCTCATTGCTGGTTGTTTCAGACAAGGGATGATAAAGGAAGGC TTGGCCTATTTTGACAACATGCACGAGGAAGGTTTTGTGCTGGACATTGGCAGCTGCAAT AAGATGCTAGAGGGACTCTGCAGTTCAGGAGAGGTTCGCAAGGCGAACAACCTGCTGACG GCAATGATGGACAAAGGACTTCTTCCTGATAAGGATACATACTTGAGCCTTATTAATGGA TATGGTAAGGTTGGTGATGCCCAATGTATTGTCAACATCTACCATGAGATGGAACACAGA AGGCTTGATCCCGGTGTTGAGGTTTTTACTGCCTTGATCAAGGGTCTTTGCCGGTGTGGG AATCTGAAGGAAGCTGAGAAACTCTTTGCGGCGATGAAGAAGAAAACGTTGGCTTCGACT AGTGACTTGTATGATATGCTTATCAGCGGTTACTGTGAGAAGCGCAATGCTAAGAGGGCA CTTTGGTTGTATGATAAGATGATGACAGAGAACGAGAAGCTTGTTCCTTCCCCTGAAACT TTCATGATGCTCGTAAGGAGAGTCATCAAAGTCAAGAATACATATTCCCCTGATAGCTGA