Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039678_T007
CDS Infomation	cds chromosome:B73_RefGen_v4:3:11697823:11701004:1 gene:Zm00001d039678 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NSP-INTERACTING KINASE 3
Sequence	ATGCTAAAGACTCTTGACATGTCAGATAACCAGCTCACGGGGAGTATCCCAGGCTCGCTT GGAAATCTGAAGAACCTCAATTATTTGAAGTTGAACAATAATAGCTTGTCTGGAGTTCTG CCTGATTCAATTGCCAGCATTGATGGTTTTGCTCTCGTAGATCTTTCGTTTAACAATCTC AGTGGCCCATTACCCAAGATTTCTGCAAGAACCTTTATCATAGCTGGAAATCCAATGATT TGTGGTAATAATTCTGGAGATAGCTGCTCTTCTGTGTCACTTGACCCACTCTCTTACCCA CCAGATGATCTGAAAACTCAGCCACAACAAGGTATTGGAAGGAGCCATCATATTGCTACA ATATGTGGAGCAACTGTTGGTTCAGTGGCTTTTGTCGCTGTTGTAGTTGGTATGCTTCTT TGGTGGCGTCATAGGCGAAATCAGCAGATCTTTTTTGATGTTAACGATCAATATGATCCA GAAGTTTGTTTGGGTCATCTAAAGCGGTATGCTTTCAAGGAGCTCCGTGCAGCTACTAAT AATTTTAACTCAAAGAACATCTTAGGTGAAGGTGGATATGGCATAGTATACAAGGGTTAT TTGCGTGATGGCTCCGTTGTTGCTGTTAAAAGGCTGAAGGATTATAATGCCGTCGGTGGG GAAGTTCAATTCCAAACTGAAGTTGAAGTCATAAGCTTGGCTGTGCATCGTAATCTCCTC CGTCTTATTGGGTTCTGCACTACGGAGAGCGAGAGGTTACTTGTTTATCCATATATGCCA AATGGAAGTGTTGCTTCTCAATTGCGGGGTGAAGAAACTCCACCAAGAAAAGCAGCTAGG CACGATGGTGGACAAGGACCTGGGCAGCAGCTACGACAGGGTGGAGCTGGAGGAGATGGT CCAGGTGTCCTTGCTGTGCACGCAGTACCACCCGTCCCACCGGCCCAGGATGTCCGAGGT GATCAGGATGCTGGAGGGGGACGGGCTCGCGGAGAGATGGGAGGCGTCGCAGAACGTGGA CACGCCGGAGTCCGTCTCGTCGGAGCTCCTGCTCCAGAAGTACATGGACTTCGCAGCGGA CGAGTGCTCGCTCGGCCTGGAAGCCATGGAGCTCTCCGGCCCGAGGTGACCGACCGGCTG GTTGACCGGACCCGGCGGGCATCGCACGGGTCG

Peptide Sequence

PEP ID	Zm00001d039678_P007
PEP Infomation	pep chromosome:B73_RefGen_v4:3:11697823:11701004:1 gene:Zm00001d039678 transcript:Zm00001d039678_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NSP-INTERACTING KINASE 3
Sequence	MLKTLDMSDNQLTGSIPGSLGNLKNLNYLKLNNNSLSGVLPDSIASIDGFALVDLSFNNL SGPLPKISARTFIIAGNPMICGNNSGDSCSSVSLDPLSYPPDDLKTQPQQGIGRSHHIAT ICGATVGSVAFVAVVVGMLLWWRHRRNQQIFFDVNDQYDPEVCLGHLKRYAFKELRAATN NFNSKNILGEGGYGIVYKGYLRDGSVVAVKRLKDYNAVGGEVQFQTEVEVISLAVHRNLL RLIGFCTTESERLLVYPYMPNGSVASQLRGEETPPRKAARHDGGQGPGQQLRQGGAGGDG PGVLAVHAVPPVPPAQDVRGDQDAGGGRARGEMGGVAERGHAGVRLVGAPAPEVHGLRSG RVLARPGSHGALRPEVTDRLVDRTRRASHGS

Transcript Sequence

Transcript ID	Zm00001d039678_T007
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:11697823:11701004:1 gene:Zm00001d039678 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NSP-INTERACTING KINASE 3
Sequence	GATAGGAAGGCTGGGGATGCTAAAGACTCTTGACATGTCAGATAACCAGCTCACGGGGAG TATCCCAGGCTCGCTTGGAAATCTGAAGAACCTCAATTATTTGAAGTTGAACAATAATAG CTTGTCTGGAGTTCTGCCTGATTCAATTGCCAGCATTGATGGTTTTGCTCTCGTAGATCT TTCGTTTAACAATCTCAGTGGCCCATTACCCAAGATTTCTGCAAGAACCTTTATCATAGC TGGAAATCCAATGATTTGTGGTAATAATTCTGGAGATAGCTGCTCTTCTGTGTCACTTGA CCCACTCTCTTACCCACCAGATGATCTGAAAACTCAGCCACAACAAGGTATTGGAAGGAG CCATCATATTGCTACAATATGTGGAGCAACTGTTGGTTCAGTGGCTTTTGTCGCTGTTGT AGTTGGTATGCTTCTTTGGTGGCGTCATAGGCGAAATCAGCAGATCTTTTTTGATGTTAA CGATCAATATGATCCAGAAGTTTGTTTGGGTCATCTAAAGCGGTATGCTTTCAAGGAGCT CCGTGCAGCTACTAATAATTTTAACTCAAAGAACATCTTAGGTGAAGGTGGATATGGCAT AGTATACAAGGGTTATTTGCGTGATGGCTCCGTTGTTGCTGTTAAAAGGCTGAAGGATTA TAATGCCGTCGGTGGGGAAGTTCAATTCCAAACTGAAGTTGAAGTCATAAGCTTGGCTGT GCATCGTAATCTCCTCCGTCTTATTGGGTTCTGCACTACGGAGAGCGAGAGGTTACTTGT TTATCCATATATGCCAAATGGAAGTGTTGCTTCTCAATTGCGGGGTGAAGAAACTCCACC AAGAAAAGCAGCTAGGCACGATGGTGGACAAGGACCTGGGCAGCAGCTACGACAGGGTGG AGCTGGAGGAGATGGTCCAGGTGTCCTTGCTGTGCACGCAGTACCACCCGTCCCACCGGC CCAGGATGTCCGAGGTGATCAGGATGCTGGAGGGGGACGGGCTCGCGGAGAGATGGGAGG CGTCGCAGAACGTGGACACGCCGGAGTCCGTCTCGTCGGAGCTCCTGCTCCAGAAGTACA TGGACTTCGCAGCGGACGAGTGCTCGCTCGGCCTGGAAGCCATGGAGCTCTCCGGCCCGA GGTGACCGACCGGCTGGTTGACCGGACCCGGCGGGCATCGCACGGGTCGG