Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039678_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:3:11697551:11701004:1 gene:Zm00001d039678 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NSP-INTERACTING KINASE 3
Sequence	ATGCGTTCCTTCGTTTACAGAGGACTGCCTAGCCAGAGCTTGTCTGGGAAGTTATCACCC GGCATCGGTAACCTCACCAGGCTGCAATCTGTGCTGTTGCAGAACAACGTGATTTCTGGA CCTATTCCCAGTACGATAGGAAGGCTGGGGATGCTAAAGACTCTTGACATGTCAGATAAC CAGCTCACGGGGAGTATCCCAGGCTCGCTTGGAAATCTGAAGAACCTCAATTATTTGAAG TTGAACAATAATAGCTTGTCTGGAGTTCTGCCTGATTCAATTGCCAGCATTGATGGTTTT GCTCTCGTAGATCTTTCGTTTAACAATCTCAGTGGCCCATTACCCAAGATTTCTGCAAGA ACCTTTATCATAGCTGGAAATCCAATGATTTGTGGTAATAATTCTGGAGATAGCTGCTCT TCTGTGTCACTTGACCCACTCTCTTACCCACCAGATGATCTGAAAACTCAGCCACAACAA GGTATTGGAAGGAGCCATCATATTGCTACAATATGTGGAGCAACTGTTGGTTCAGTGGCT TTTGTCGCTGTTGTAGTTGGTATGCTTCTTTGGTGGCGTCATAGGCGAAATCAGCAGATC TTTTTTGATGTTAACGATCAATATGATCCAGAAGTTTGTTTGGGTCATCTAAAGCGGTAT GCTTTCAAGGAGCTCCGTGCAGCTACTAATAATTTTAACTCAAAGAACATCTTAGGTGAA GGTGGATATGGCATAGTATACAAGGGTTATTTGCGTGATGGCTCCGTTGTTGCTGTTAAA AGGCTGAAGGATTATAATGCCGTCGGTGGGGAAGTTCAATTCCAAACTGAAGTTGAAGTC ATAAGCTTGGCTGTGCATCGTAATCTCCTCCGTCTTATTGGGTTCTGCACTACGGAGAGC GAGAGGTTACTTGTTTATCCATATATGCCAAATGGAAGTGTTGCTTCTCAATTGCGGGAA CATATAAACGGCAAGCCAGCTCTAGACTGGCCAAGGAGAAAGAGGATAGCGCTAGGCACG GCACGGGGCCTGCTCTACCTTCACGAGCAATGCGACCCGAAGATAATCCACCGGGACGTA AAGGCTTCCAACGTGCTTCTCGACGAGTACTTCGAAGCGATCGTGGGAGACTTCGGGCTG GCGAAACTCCTGGACCACAGGGAGTCCCACGTCACGACCGCGGTGCGCGGGACCGTCGGG CACATCGCGCCGGAGTACCTGTCGACGGGCCAGTCGTCGGAGAAGACCGACGTGTTTGGG TTCGGGGTTCTGTTAGTCGAGCTGATCACTGGGCAGAAGGCGCTGGATTTCGGAAGGGTG GCGAACCAGAAGGGTGGAGTGCTCGACTGGGTGAAGAAACTCCACCAAGAAAAGCAGCTA GGCACGATGGTGGACAAGGACCTGGGCAGCAGCTACGACAGGGTGGAGCTGGAGGAGATG GTCCAGGTGTCCTTGCTGTGCACGCAGTACCACCCGTCCCACCGGCCCAGGATGTCCGAG GTGATCAGGATGCTGGAGGGGGACGGGCTCGCGGAGAGATGGGAGGCGTCGCAGAACGTG GACACGCCGGAGTCCGTCTCGTCGGAGCTCCTGCTCCAGAAGTACATGGACTTCGCAGCG GACGAGTGCTCGCTCGGCCTGGAAGCCATGGAGCTCTCCGGCCCGAGGTGA

Peptide Sequence

PEP ID	Zm00001d039678_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:3:11697551:11701004:1 gene:Zm00001d039678 transcript:Zm00001d039678_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NSP-INTERACTING KINASE 3
Sequence	MRSFVYRGLPSQSLSGKLSPGIGNLTRLQSVLLQNNVISGPIPSTIGRLGMLKTLDMSDN QLTGSIPGSLGNLKNLNYLKLNNNSLSGVLPDSIASIDGFALVDLSFNNLSGPLPKISAR TFIIAGNPMICGNNSGDSCSSVSLDPLSYPPDDLKTQPQQGIGRSHHIATICGATVGSVA FVAVVVGMLLWWRHRRNQQIFFDVNDQYDPEVCLGHLKRYAFKELRAATNNFNSKNILGE GGYGIVYKGYLRDGSVVAVKRLKDYNAVGGEVQFQTEVEVISLAVHRNLLRLIGFCTTES ERLLVYPYMPNGSVASQLREHINGKPALDWPRRKRIALGTARGLLYLHEQCDPKIIHRDV KASNVLLDEYFEAIVGDFGLAKLLDHRESHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG FGVLLVELITGQKALDFGRVANQKGGVLDWVKKLHQEKQLGTMVDKDLGSSYDRVELEEM VQVSLLCTQYHPSHRPRMSEVIRMLEGDGLAERWEASQNVDTPESVSSELLLQKYMDFAA DECSLGLEAMELSGPR

Transcript Sequence

Transcript ID	Zm00001d039678_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:11697551:11701004:1 gene:Zm00001d039678 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein NSP-INTERACTING KINASE 3
Sequence	TCGATCTTCTCACATGCGTTCCTTCGTTTACAGAGGACTGCCTAGCCAGAGCTTGTCTGG GAAGTTATCACCCGGCATCGGTAACCTCACCAGGCTGCAATCTGTGCTGTTGCAGAACAA CGTGATTTCTGGACCTATTCCCAGTACGATAGGAAGGCTGGGGATGCTAAAGACTCTTGA CATGTCAGATAACCAGCTCACGGGGAGTATCCCAGGCTCGCTTGGAAATCTGAAGAACCT CAATTATTTGAAGTTGAACAATAATAGCTTGTCTGGAGTTCTGCCTGATTCAATTGCCAG CATTGATGGTTTTGCTCTCGTAGATCTTTCGTTTAACAATCTCAGTGGCCCATTACCCAA GATTTCTGCAAGAACCTTTATCATAGCTGGAAATCCAATGATTTGTGGTAATAATTCTGG AGATAGCTGCTCTTCTGTGTCACTTGACCCACTCTCTTACCCACCAGATGATCTGAAAAC TCAGCCACAACAAGGTATTGGAAGGAGCCATCATATTGCTACAATATGTGGAGCAACTGT TGGTTCAGTGGCTTTTGTCGCTGTTGTAGTTGGTATGCTTCTTTGGTGGCGTCATAGGCG AAATCAGCAGATCTTTTTTGATGTTAACGATCAATATGATCCAGAAGTTTGTTTGGGTCA TCTAAAGCGGTATGCTTTCAAGGAGCTCCGTGCAGCTACTAATAATTTTAACTCAAAGAA CATCTTAGGTGAAGGTGGATATGGCATAGTATACAAGGGTTATTTGCGTGATGGCTCCGT TGTTGCTGTTAAAAGGCTGAAGGATTATAATGCCGTCGGTGGGGAAGTTCAATTCCAAAC TGAAGTTGAAGTCATAAGCTTGGCTGTGCATCGTAATCTCCTCCGTCTTATTGGGTTCTG CACTACGGAGAGCGAGAGGTTACTTGTTTATCCATATATGCCAAATGGAAGTGTTGCTTC TCAATTGCGGGAACATATAAACGGCAAGCCAGCTCTAGACTGGCCAAGGAGAAAGAGGAT AGCGCTAGGCACGGCACGGGGCCTGCTCTACCTTCACGAGCAATGCGACCCGAAGATAAT CCACCGGGACGTAAAGGCTTCCAACGTGCTTCTCGACGAGTACTTCGAAGCGATCGTGGG AGACTTCGGGCTGGCGAAACTCCTGGACCACAGGGAGTCCCACGTCACGACCGCGGTGCG CGGGACCGTCGGGCACATCGCGCCGGAGTACCTGTCGACGGGCCAGTCGTCGGAGAAGAC CGACGTGTTTGGGTTCGGGGTTCTGTTAGTCGAGCTGATCACTGGGCAGAAGGCGCTGGA TTTCGGAAGGGTGGCGAACCAGAAGGGTGGAGTGCTCGACTGGGTGAAGAAACTCCACCA AGAAAAGCAGCTAGGCACGATGGTGGACAAGGACCTGGGCAGCAGCTACGACAGGGTGGA GCTGGAGGAGATGGTCCAGGTGTCCTTGCTGTGCACGCAGTACCACCCGTCCCACCGGCC CAGGATGTCCGAGGTGATCAGGATGCTGGAGGGGGACGGGCTCGCGGAGAGATGGGAGGC GTCGCAGAACGTGGACACGCCGGAGTCCGTCTCGTCGGAGCTCCTGCTCCAGAAGTACAT GGACTTCGCAGCGGACGAGTGCTCGCTCGGCCTGGAAGCCATGGAGCTCTCCGGCCCGAG GTGACCGACCGGCTGGTTGACCGGACCCGGCGGGCATCGCACGGGTCGG