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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039664_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:3:11337125:11344619:1 gene:Zm00001d039664 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence

ATGGTGGTGGAGGAGATCGCCGAGGGGGTGAAGAACCTCACCGTTACCGGAGACGCGGCG
GCTTCAGGCGGAGAGGGGCAGAGGAGGGGCGGCGGCGGCAGCAGCAACCGCATCCAGGTG
TCCAACACCAAGAAACCCCTCTTCTTCTACGTCAACCTCGCCAAGTCCGTGCAGAGGTAT
ATGCAACAGCACGAAGATGTAGAGCTATCCGCTCTTGGAATGGCCATAGCAACAGTTGTG
ACCGTGGCAGAAATTCTGAAGAACAATGGATTTGCTGTTGAAAAGAAAATTAGGACCTCT
ACTGTTGAAATAAACGACGAATCAAGAGGGCGTCCATTCCAAAAGGCCAAGATTGAGATA
ATCTTGGGAAAGAGCGACAAATTTGATGAGCTGATGGCCGCTGCTGCAGAAGAGAGGGGC
GAAGTGGAAGATGGTGAAGAGCAGGCTTGA

Peptide Sequence

PEP ID

Zm00001d039664_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:3:11337125:11344619:1 gene:Zm00001d039664 transcript:Zm00001d039664_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence

MVVEEIAEGVKNLTVTGDAAASGGEGQRRGGGGSSNRIQVSNTKKPLFFYVNLAKSVQRY
MQQHEDVELSALGMAIATVVTVAEILKNNGFAVEKKIRTSTVEINDESRGRPFQKAKIEI
ILGKSDKFDELMAAAAEERGEVEDGEEQA

Transcript Sequence

Transcript ID

Zm00001d039664_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:11337125:11344619:1 gene:Zm00001d039664 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence

ACGCGAGAGGGAGGGAGGAGGTGAGCCACCGGAAGCGGAGACGTGAGCAGTCGACCAACC
CCGTCGATCCGGCTGCGGCCCGGCGTGCTAGATCGCTACCGATCATGGTGGTGGAGGAGA
TCGCCGAGGGGGTGAAGAACCTCACCGTTACCGGAGACGCGGCGGCTTCAGGCGGAGAGG
GGCAGAGGAGGGGCGGCGGCGGCAGCAGCAACCGCATCCAGGTGTCCAACACCAAGAAAC
CCCTCTTCTTCTACGTCAACCTCGCCAAGTCCGTGCAGAGGTATATGCAACAGCACGAAG
ATGTAGAGCTATCCGCTCTTGGAATGGCCATAGCAACAGTTGTGACCGTGGCAGAAATTC
TGAAGAACAATGGATTTGCTGTTGAAAAGAAAATTAGGACCTCTACTGTTGAAATAAACG
ACGAATCAAGAGGGCGTCCATTCCAAAAGGCCAAGATTGAGATAATCTTGGGAAAGAGCG
ACAAATTTGATGAGCTGATGGCCGCTGCTGCAGAAGAGAGGGGCGAAGTGGAAGATGGTG
AAGAGCAGGCTTGAAAACAGTACCGATGACAAGCTGCTGCTGCTGTGCTCTGTTAGTGTT
GTTTAATTTAGTTTAATACCGTGTGCATGAGATATGGCACGCGTTCTTGCTCAACTACAT
CACCATGGCAATGTCTGCAAATCCATGGATTGATGGATGGATGTTGGTTGTTTCTTAACA
TTCTGGACATGTTGTTCACTTTGGCTATGTATGTTTTAGCAGTC