Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039647_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:3:10279527:10286278:1 gene:Zm00001d039647 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rotten ear3 description:Boron transporter-like protein 2
Sequence	ATGTATATCTTCTTTGCCTCTGCTCTCCCTGTCATTGCCTTCGGAGCACAACTGAGCACG GCAACAAATGGAATACTCTCAACAGTTGAAACACTGGCATCGACTGCGATATGTGGCATC ATACATTCAATTCTTGGAGGGCAGCCTTTGTTGATTGTTGGAGTTGCCGAACCAACTATT ATCATGTACACTTATCTCTACAATTTTGCCAAGAATCATCAAGCTCTGGGTGAGCAGCTA TATTTGGCGTGGACAGGATGGGTCTGCATCTGGACTGCCATCATGTTGTTTCTTTTGGCA ACGTTCAATGCTTCCAACGTTATTAGCAGATTTACAAGGATTGCAGGAGAACTTTTTGGC ATGTTAATCACTGTTCTCTTCTTGCAAGAAGCTATCAAGGGGATGATAAGTGAATTTAGT GTGCCCGAAGACGCTGACAGCAGTTCACCAATATACCAATTCCAGTGGCTCTATGTCAAT GGCCTACTCGGTGTCATATTTTCAATTGGCTTGCTGTACACTGCATTGAGGACCAGGCGA GCAAGGTCATGGCTCTATGGCACAGGGTGGTTTAGAAGCTTCATAGCTGATTACGGCGTC CCACTTATGGTGATTGTGTGGACAGGATTGTCGTATTTACATCCAGGCAAGGTGCCTTCA GGAGTCCCCAGGAGGCTTTCTTCTCCACTTCCCTGGGAGTCAAGTTCACTGGGACACTGG ACCACAGCAAGGGATTTGTTTTCTGTCCCTCCAGCATATATATTTGGAGCCATTCTGCCT GCTTTTATGGTTGCAGGACTTTACTTCTTTGATCACAGCGTAGCTTCACAGTTGGCACAG CAAAAAGAGTATAATTTGAAGAAGCCTTCTGCCTACCACTATGACATTTTGGTCCTTGGA TTCGTGGTCCTGCTCTGCGGTTTGCTTGGTATCCCTCCATCTAATGGAGTGCTTCCTCAG TCTCCCATGCACACAAAAAGTCTTGCTGTCCTTAAGAGGCAGTTGCTAAGCAAAAAGATG GTTGATACTGCCAAGGAGAGCATAGGAGGAAGTGCTACCAGTTTGGAAATATATGGCAAG ATGGAAGAAGTTTTCATCAAAATGGATAGCGAACAGAATACTGATTCTGTTGACAGGGAG TTGAAGAACTTCAAGGATGCTGTTCTGCAAGAAGGCGACGAAGAAGGGAGATTGGCTAGA GAATTTGACCCTCGCAAACATATAGAAGCCCACTTGCCTGTCCGAGTGAACGAACAGAGA CTGAGCAATCTGCTGCAGTCCATACTGGTTGGTGGGTGTGTTGGAGCTATGCCAGTCATC AGGATGATACCCACATCGGTCCTCTGGGGTTACTTTGCCTACATGGCCATCGACAGTCTA CCAGGGAATCAGTTCTGGGAGAGGATACAGCTTCTGTTCATTACAGAAAGCCGACGCTAC AAGGTTCTTGAAGGTCCCCATGCATCGTTTGTGGAGTCAGTGGTTCCCAAAACAGTAACC ATCTTCACGATCTTCCAGTTGGTTTACCTCCTAATATGCTTCGGCATAACGTGGATACCG ATAGCCGGGATCCTGTTCCCAGTGCCTTTCTTCCTCATGATCGTCATCAGGCAGTATCTC CTCCCAAAATTTTTTGATCCCGTCGTCTTGAGGGAGCTCGATGCAGCTGAGTACGAAGAA CTTGACGGGGTCCCCCTTGAACACAAACTGGAAGATGAAGCATCTGAAGTAGGAAGTTGT CCTAGCCGTCCTGATGCGGAGATATTGGATGAACTCACGACCAACCGCGGAGAGCTGAAG CACAGAAGTTCTAGCCTGCGTGAAGAAAGACCAATTCAAGTGACAGTGAGCACGCATATG GTTGCTTCAAGTGCGGTTCAGCCAAGCCTGTGA

Peptide Sequence

PEP ID	Zm00001d039647_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:3:10279527:10286278:1 gene:Zm00001d039647 transcript:Zm00001d039647_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rotten ear3 description:Boron transporter-like protein 2
Sequence	MYIFFASALPVIAFGAQLSTATNGILSTVETLASTAICGIIHSILGGQPLLIVGVAEPTI IMYTYLYNFAKNHQALGEQLYLAWTGWVCIWTAIMLFLLATFNASNVISRFTRIAGELFG MLITVLFLQEAIKGMISEFSVPEDADSSSPIYQFQWLYVNGLLGVIFSIGLLYTALRTRR ARSWLYGTGWFRSFIADYGVPLMVIVWTGLSYLHPGKVPSGVPRRLSSPLPWESSSLGHW TTARDLFSVPPAYIFGAILPAFMVAGLYFFDHSVASQLAQQKEYNLKKPSAYHYDILVLG FVVLLCGLLGIPPSNGVLPQSPMHTKSLAVLKRQLLSKKMVDTAKESIGGSATSLEIYGK MEEVFIKMDSEQNTDSVDRELKNFKDAVLQEGDEEGRLAREFDPRKHIEAHLPVRVNEQR LSNLLQSILVGGCVGAMPVIRMIPTSVLWGYFAYMAIDSLPGNQFWERIQLLFITESRRY KVLEGPHASFVESVVPKTVTIFTIFQLVYLLICFGITWIPIAGILFPVPFFLMIVIRQYL LPKFFDPVVLRELDAAEYEELDGVPLEHKLEDEASEVGSCPSRPDAEILDELTTNRGELK HRSSSLREERPIQVTVSTHMVASSAVQPSL

Transcript Sequence

Transcript ID	Zm00001d039647_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:10279527:10286278:1 gene:Zm00001d039647 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:rotten ear3 description:Boron transporter-like protein 2
Sequence	GACAAAGCCCACGCCGCGCCCTCGCCCTCGCCCTCGCCCCCCTGCCTAGGGCTCCGCGCC GCCCCGAGGAGAGGAGAACGCGCGCGCGCGCGCGCGCCATTGCGGATCCAAACGCTCCGC CGCCTCAACTCCCTCGTCAATTCACCTCCGCCGCCGCCGCCGCGCCGCTTCGAACACGAT GGATCTACTGAGACACCCCTTCAAGGGAGTTGTCACTGATATCAAAGGAAGGGCCACTTG GTACAAGCATGATTGGGTTGCAGGACTCCACTCTGGCTTTAGGTCAGTTTCGTCTAAAGG AAGGATTGTGCTGGATATTAGTAATTATCTGTGTCTGGCATGTTCACTACTCCTGTTAAC TGCATAGCTTATTTGTATTGCTGCCAAATGGACCATCAGGATATTGGCACCTACCATGTA TATCTTCTTTGCCTCTGCTCTCCCTGTCATTGCCTTCGGAGCACAACTGAGCACGGCAAC AAATGGAATACTCTCAACAGTTGAAACACTGGCATCGACTGCGATATGTGGCATCATACA TTCAATTCTTGGAGGGCAGCCTTTGTTGATTGTTGGAGTTGCCGAACCAACTATTATCAT GTACACTTATCTCTACAATTTTGCCAAGAATCATCAAGCTCTGGGTGAGCAGCTATATTT GGCGTGGACAGGATGGGTCTGCATCTGGACTGCCATCATGTTGTTTCTTTTGGCAACGTT CAATGCTTCCAACGTTATTAGCAGATTTACAAGGATTGCAGGAGAACTTTTTGGCATGTT AATCACTGTTCTCTTCTTGCAAGAAGCTATCAAGGGGATGATAAGTGAATTTAGTGTGCC CGAAGACGCTGACAGCAGTTCACCAATATACCAATTCCAGTGGCTCTATGTCAATGGCCT ACTCGGTGTCATATTTTCAATTGGCTTGCTGTACACTGCATTGAGGACCAGGCGAGCAAG GTCATGGCTCTATGGCACAGGGTGGTTTAGAAGCTTCATAGCTGATTACGGCGTCCCACT TATGGTGATTGTGTGGACAGGATTGTCGTATTTACATCCAGGCAAGGTGCCTTCAGGAGT CCCCAGGAGGCTTTCTTCTCCACTTCCCTGGGAGTCAAGTTCACTGGGACACTGGACCAC AGCAAGGGATTTGTTTTCTGTCCCTCCAGCATATATATTTGGAGCCATTCTGCCTGCTTT TATGGTTGCAGGACTTTACTTCTTTGATCACAGCGTAGCTTCACAGTTGGCACAGCAAAA AGAGTATAATTTGAAGAAGCCTTCTGCCTACCACTATGACATTTTGGTCCTTGGATTCGT GGTCCTGCTCTGCGGTTTGCTTGGTATCCCTCCATCTAATGGAGTGCTTCCTCAGTCTCC CATGCACACAAAAAGTCTTGCTGTCCTTAAGAGGCAGTTGCTAAGCAAAAAGATGGTTGA TACTGCCAAGGAGAGCATAGGAGGAAGTGCTACCAGTTTGGAAATATATGGCAAGATGGA AGAAGTTTTCATCAAAATGGATAGCGAACAGAATACTGATTCTGTTGACAGGGAGTTGAA GAACTTCAAGGATGCTGTTCTGCAAGAAGGCGACGAAGAAGGGAGATTGGCTAGAGAATT TGACCCTCGCAAACATATAGAAGCCCACTTGCCTGTCCGAGTGAACGAACAGAGACTGAG CAATCTGCTGCAGTCCATACTGGTTGGTGGGTGTGTTGGAGCTATGCCAGTCATCAGGAT GATACCCACATCGGTCCTCTGGGGTTACTTTGCCTACATGGCCATCGACAGTCTACCAGG GAATCAGTTCTGGGAGAGGATACAGCTTCTGTTCATTACAGAAAGCCGACGCTACAAGGT TCTTGAAGGTCCCCATGCATCGTTTGTGGAGTCAGTGGTTCCCAAAACAGTAACCATCTT CACGATCTTCCAGTTGGTTTACCTCCTAATATGCTTCGGCATAACGTGGATACCGATAGC CGGGATCCTGTTCCCAGTGCCTTTCTTCCTCATGATCGTCATCAGGCAGTATCTCCTCCC AAAATTTTTTGATCCCGTCGTCTTGAGGGAGCTCGATGCAGCTGAGTACGAAGAACTTGA CGGGGTCCCCCTTGAACACAAACTGGAAGATGAAGCATCTGAAGTAGGAAGTTGTCCTAG CCGTCCTGATGCGGAGATATTGGATGAACTCACGACCAACCGCGGAGAGCTGAAGCACAG AAGTTCTAGCCTGCGTGAAGAAAGACCAATTCAAGTGACAGTGAGCACGCATATGGTTGC TTCAAGTGCGGTTCAGCCAAGCCTGTGAAGACGGCGAAGTGTTCTTTTTATCCGTAGAAT TATGATCCTCAAGCTGCACTCCGTTGATGTGAATACTGTTGCTATGTAATGTACTGCTAC TACTAGTGTTGTACTTGGGTTTTTGACCCAAACGCGTCTGTTGGTAAGGGGTGATTTGTA AGAACAGGGACTTACGTAAACTACGTAGGATCGATTGGTAAGAAGAGAGGGAGAGAGGAG ATGCAATACAAGTCTTCTTGGATATGAAAGGGGGAATGCCGAAGGGGCATGGAGTAGAAT AATATCATATATTGTCATTAGTTCAAATAGACTGTAGTAAC