Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039625_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:9377677:9380955:1 gene:Zm00001d039625 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
Sequence

ATGTGGAAGCAATTTATCGGAAAGCTATCGTGGAAGTCAATGAAATCCAGCTCTGGCAGC
GGGGGGTCGCCGCCGGCGCCACTATCGTCGCCGCGGGATAATGGAGCCTCACCGCGGGAG
AATGGGGCCACGGGGAAGCCTAACGTCTCGCCTCGGTCTCCCGCGGCTGGCGCCGGAGCC
GGAGCCGAGGTGAGGTCCAGGGAGGACGCCTTTGTCCAGAAAGTTAACATTTGCTGCGCG
GTGTACGACTTCTCCGACCGAGGCAAGGACTCGCCGGAGAAGGAGCGGAAGCGGCAAATG
CTCATGTCCCTCGTCGACTGCATTGGCGCCGCCGAGGAGCCGCTCACGGAGACGATGATA
GCAGCGTGCGTGCGCATGTTCGCTGCTAACCTGTTCAGGGTCTTCCCGCCCAAAGTCCGG
TCTGGCACCTCGGCTTCGGAGACCGAGGAGGACGAGCCGTTCTTCGATCCGTCCTGGTAC
CACCTGCAAGTCGTTTACGAGTTTCTCCTTAGGTTTGTGACCTCACCACTCGTGGATGCT
AAGGTGGCTAGGAAGTATGTGGATAGCCCTTTCGTCTCCAAGCTGCTCGATCTGTTTGAT
TCGGATGACCCGAGAGAAAGGGACTGCTTGAAGACAATATTGCATAGGATATATGGCAAG
TTCATGGGAAACCGACCGTTCATCCGTAAGGCTGTGAGCAACATCTTCTATAGGTTTGTG
TTCGAGACGGATCACCACAATGGGATTGCCGAACTATTGGAGGTCTTTGGCAGTGTGATA
AGTGGGTTTGCAAAGCCATTGAAGGAGGAACATAAGTTGTTCTTATGGAAAGCATTGATA
CCACTTCATAAGCCGAAATCAATGGGAGTGTATCTGCCACAGCTGACATATTGCATCACA
CAATTTATTGACAAGGAACCAAAGCTTGCTGGGACTGTGATCAGGGGCCTGTTAAAGTAT
TGGCCAGTTACAAATAGTCAAAAGGAAATGATGTTTTTGGGGGAGTTGGAGGAGGTGCTG
GAGTTGACTGACATGGCTGAATTTCAGAAGTGCATGGTCCCCTTATTCCGGAAGATTGCT
AGTTGCCTGAATAGCTCTCATTTTCAGGTTGCAGAGAGAGCCTTGTTCCTATGGAACAAC
GAGCACCTATTCGACATGATCTCCCAAAACCGCCAAGTAATCCTACCAATCATATACCCA
GCTCTGGAGAGGAACACCCGCTGGCACTGGAACCAGTCGGTCCTCAACGTAACCATGAAC
GTGCGGAAAATGTTCCGCGACATGGACGAGAGGCTGCTTCAAGCCTGCCACGACAACTTC
CAAGAGGAAGAGGAGAAGCGGGCCGTGACTGAGGAGCGGCGGAGGCTCATGTGGGAGCAG
CTGGAGCGAAGTGCCGCTCGCGGGTACCACCAGCCGACGACGATCGCTGCCGATGCGAGC
AGCTTCCCCGCGCCCTCTTCATCGGCTCGTCTTGTATCCCTCACCGTGACATGA

Peptide Sequence

PEP ID

Zm00001d039625_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:9377677:9380955:1 gene:Zm00001d039625 transcript:Zm00001d039625_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
Sequence

MWKQFIGKLSWKSMKSSSGSGGSPPAPLSSPRDNGASPRENGATGKPNVSPRSPAAGAGA
GAEVRSREDAFVQKVNICCAVYDFSDRGKDSPEKERKRQMLMSLVDCIGAAEEPLTETMI
AACVRMFAANLFRVFPPKVRSGTSASETEEDEPFFDPSWYHLQVVYEFLLRFVTSPLVDA
KVARKYVDSPFVSKLLDLFDSDDPRERDCLKTILHRIYGKFMGNRPFIRKAVSNIFYRFV
FETDHHNGIAELLEVFGSVISGFAKPLKEEHKLFLWKALIPLHKPKSMGVYLPQLTYCIT
QFIDKEPKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTDMAEFQKCMVPLFRKIA
SCLNSSHFQVAERALFLWNNEHLFDMISQNRQVILPIIYPALERNTRWHWNQSVLNVTMN
VRKMFRDMDERLLQACHDNFQEEEEKRAVTEERRRLMWEQLERSAARGYHQPTTIAADAS
SFPAPSSSARLVSLTVT

Transcript Sequence

Transcript ID

Zm00001d039625_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:9377677:9380955:1 gene:Zm00001d039625 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform
Sequence

CCTCTCGCCTCCTCCCCTCTCCGCCAGCGGCTGCCACCAGCCCACCACCGCCCCTCCTCA
AAACGCCAAAAATTTCCCCACCTCTAGACGCCCTTTCCCCTCCCCCCGAGATCCCATCCA
TGGCCACCTCCCGCCCCCGGATCTGGCGCTGAGCCCGCCATTGCCGGATCCCTGCCAGGT
CTCCACCCCGCCGTCGCGCTCCCGGCCCGGTTCTATTGGGCGCGGCGTGGCATTCCCTTT
CTTCTTTGTGCGCTAACCGGGGGGTGGTGGTTGATCTGTACTGGCGGGTGCAGCGCGCCT
TGCGATCTCTAGCTGTTGCTGCGGGAGGACCGGCCGCCTCGTCGCCGTTGCCAAGTGCGC
TCTTTTAAAGCCCGAAGATTCGCCCCCTCCGCGTGTTCGTGTCGCCGAGAGGAGGTCGGA
CTTGTCGGAATGGTCGTCTAATTGGGGAGATTTGATGTGTTATTGGTGCCGCCGGATCTC
GCCGACATGTGGAAGCAATTTATCGGAAAGCTATCGTGGAAGTCAATGAAATCCAGCTCT
GGCAGCGGGGGGTCGCCGCCGGCGCCACTATCGTCGCCGCGGGATAATGGAGCCTCACCG
CGGGAGAATGGGGCCACGGGGAAGCCTAACGTCTCGCCTCGGTCTCCCGCGGCTGGCGCC
GGAGCCGGAGCCGAGGTGAGGTCCAGGGAGGACGCCTTTGTCCAGAAAGTTAACATTTGC
TGCGCGGTGTACGACTTCTCCGACCGAGGCAAGGACTCGCCGGAGAAGGAGCGGAAGCGG
CAAATGCTCATGTCCCTCGTCGACTGCATTGGCGCCGCCGAGGAGCCGCTCACGGAGACG
ATGATAGCAGCGTGCGTGCGCATGTTCGCTGCTAACCTGTTCAGGGTCTTCCCGCCCAAA
GTCCGGTCTGGCACCTCGGCTTCGGAGACCGAGGAGGACGAGCCGTTCTTCGATCCGTCC
TGGTACCACCTGCAAGTCGTTTACGAGTTTCTCCTTAGGTTTGTGACCTCACCACTCGTG
GATGCTAAGGTGGCTAGGAAGTATGTGGATAGCCCTTTCGTCTCCAAGCTGCTCGATCTG
TTTGATTCGGATGACCCGAGAGAAAGGGACTGCTTGAAGACAATATTGCATAGGATATAT
GGCAAGTTCATGGGAAACCGACCGTTCATCCGTAAGGCTGTGAGCAACATCTTCTATAGG
TTTGTGTTCGAGACGGATCACCACAATGGGATTGCCGAACTATTGGAGGTCTTTGGCAGT
GTGATAAGTGGGTTTGCAAAGCCATTGAAGGAGGAACATAAGTTGTTCTTATGGAAAGCA
TTGATACCACTTCATAAGCCGAAATCAATGGGAGTGTATCTGCCACAGCTGACATATTGC
ATCACACAATTTATTGACAAGGAACCAAAGCTTGCTGGGACTGTGATCAGGGGCCTGTTA
AAGTATTGGCCAGTTACAAATAGTCAAAAGGAAATGATGTTTTTGGGGGAGTTGGAGGAG
GTGCTGGAGTTGACTGACATGGCTGAATTTCAGAAGTGCATGGTCCCCTTATTCCGGAAG
ATTGCTAGTTGCCTGAATAGCTCTCATTTTCAGGTTGCAGAGAGAGCCTTGTTCCTATGG
AACAACGAGCACCTATTCGACATGATCTCCCAAAACCGCCAAGTAATCCTACCAATCATA
TACCCAGCTCTGGAGAGGAACACCCGCTGGCACTGGAACCAGTCGGTCCTCAACGTAACC
ATGAACGTGCGGAAAATGTTCCGCGACATGGACGAGAGGCTGCTTCAAGCCTGCCACGAC
AACTTCCAAGAGGAAGAGGAGAAGCGGGCCGTGACTGAGGAGCGGCGGAGGCTCATGTGG
GAGCAGCTGGAGCGAAGTGCCGCTCGCGGGTACCACCAGCCGACGACGATCGCTGCCGAT
GCGAGCAGCTTCCCCGCGCCCTCTTCATCGGCTCGTCTTGTATCCCTCACCGTGACATGA
GAACACGAGGTTGCAACCAGATGTTGCTCTGTTTTCGCCGCTTGGTAGCTAAAGCTAGAT
GATGGAGTTGCTTGCTTCGCTGGGGGATGCACGCACGAAGGCATTTTGTTACCTTCTGTG
TATGCATAACCCCCCTTGTCAAAGTCTGTAATTAATAGCTGACGGTTTGAGGACAAAGGG
ACGTTTTGGATTTTTGCAATGGCGTATTCTTGAAATGGGCATGGTGTTCTCTTCTTGCTG
CCTAAATGTTGTCTGGTTCTACCACAGCGCTCTCTGCTGTGTATCTGGACAGTATGTATG
CCCCATGGGAGGATGACAATCGACAAGTTTGCAGCTTTCCTTTTTTTTGGTTGT