Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039617_T024
CDS Infomation	cds chromosome:B73_RefGen_v4:3:9150699:9161852:-1 gene:Zm00001d039617 gene_biotype:protein_coding transcript_biotype:protein_coding description:P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Sequence	ATGACGGAGCCGCGCAGGGTGTCGTTCCGCGACGGCTGCCTCGCGTCGCGGAAGGCCGAG GAAGCAGCATGGAGGCGGCATCAGGCTGCAGCCTGGCTCCAAGCAATGGTGGGCTCCTTG GGCCTGCCTCCTTATCCGTCGGAGCAAGAGTTTGTTGCTTCTCTAAGGAATGGCATTGTC CTATGCAAGGCAATCAACAAGTTACAGCCTGGTGCCGTGACAAAGATTATCACAAATGCC CCCAGCAATAGCCAGCCGTTGACGGCTTTTCAGTATTTCGAGAACATCCGCAACTTCTTA GTCGCTGTCAACAAACTGAAGCTGACGAGTTTTGAGGCATCTGACTTAGATAAGGACAAT CTTGATGCTGGGACGGTTGGCAAGATTGTTGACTGTGTCATTTCATTGAAGTCTTACCAT GAATGGAAGCAAGCCGGCGGAGCCAATGGGCCTAACAAGTACATGAAATCACCTCTTGCA GTGCGTTCTTCGCAGATTCAATCCGAAAATGTTGCTTCGGGACCTTCTCCCTCCCTAAAG CGTCTAGACTTGACTGAGGTTGATGCTGACACACAGACATTTCAAAATCTAGATCCTAAC ATGAAAGATTGTGCATTTGCAGACGCAGTGGAGAAACTTCAGAAAGTTATAGTAGATTCT ATGTTGAGTTCTAAGGAAAATATTGACCAAGACATTCTGAAAAAGGTTCCATCAAAGCTT ATTGGTGCTGTTTTAGCAAGCCAACTGGGAAAAGAACAGTTCAAACATCTTCAGCTTTTA TCTCCGGAAAAGCTTATAGCGGAGAATGAGCCAACTCATTGTATTGAGCATCCCAACTCA CCGATTGAGAGCAAACAATTGCTGTTGCAAGCACATGAAACTGAACTTTTGGACCTCAAG AAAATGTTTCAAGATGTTAAAGTCAACTTCAGGTCTTTGCAGACCCAATTTCGAGATGAC ATGGCCAAATTAGGTGAAAATATCCAAGATCTTTCCAAAGCTGCCCTTGGTTATAACCAA GCCGTAAAAGAAAACAGAAATTTGTATAACATGCTTCAAGAACTGCGAGGAAATATCCGA GTCTTCTGCCGGATAAGGCCACTTCTTCATTCAGAGTCTATTTCTTCAATTGAACATGTT GGAACCGATGGCTCAGTGATGGTCTGTGATCCAGTTAAACCACAAAGTGCACATAAAATA TTCCAGTTCAACAAAGTTTTTGGGCCAACAACTACTCAAGATGAAGTGTATAAGGAGACA CAACCTTTGGTTAGATCCGTCATGGATGGATATAATGTATGCATATTTGCTTACGGTCAG ACAGGTTCCGGCAAAACCCATACAATGTGTGGCCCATCTGGTGGGCTGTCCAAGGATTAT GGAATTAATTACATGGCCTTGAATGATCTCTTCAACATATCAACTTCTAGAGAAGATGTC AAGTACGACATACGGGTGCAGATGGTTGAAATATACAATGAACAAGTTCGTGATCTTCTA AATGAGGACAGATCAAGCACAAAATTAGATATAAGGGCTTCCTTGAACAATGGTCTATCC AACCTTCCAGATGCAAAGATCTGCCCAGTGCAGTCCCCTTCTGATGTTATCAATTTGATG CAGTTGGGTGAAAAGCACCGAGCTTCCGGATCAACAGCAATGAACCATAGGAGCAGTCGT TCCCACAGTATCTTAACTGTCCATGTAAATGGAAAGGACATTGCTGGCAATGTGAGCCGT AGCAGTTTGCATTTGGTAGATCTTGCAGGAAGCGAAAGGGTTGATAGGTCAGAAGCCACA GGAGACAGATTAAAAGAGGCTCAGCATATTAACAAGTCACTCTCCTGCCTTGGAGATGTC ATCAACGCATTAGCTCAGAAGAACTCTCACATTCCTTATAGAAATAGTAAACTCACCCAA CTACTACAAAGTTCATTAGGGGGGAATGCAAAAATGCTAATGTTTGCCCACATAAGTCCG GATGCAGAATCTTGTGCAGAAACCCTTAGTACACTAAAATTTGCTCAGAGGGCTTCTACT GTAGAACTTGGGACTGCACTCGCAAACAAAGAAAGCAGTGAAGTAAGAGAGCTTAAGGAA CAGGTAGATACTCTGAAAAAGGCATTAGCAAGTAAAGAA

Peptide Sequence

PEP ID	Zm00001d039617_P024
PEP Infomation	pep chromosome:B73_RefGen_v4:3:9150699:9161852:-1 gene:Zm00001d039617 transcript:Zm00001d039617_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Sequence	MTEPRRVSFRDGCLASRKAEEAAWRRHQAAAWLQAMVGSLGLPPYPSEQEFVASLRNGIV LCKAINKLQPGAVTKIITNAPSNSQPLTAFQYFENIRNFLVAVNKLKLTSFEASDLDKDN LDAGTVGKIVDCVISLKSYHEWKQAGGANGPNKYMKSPLAVRSSQIQSENVASGPSPSLK RLDLTEVDADTQTFQNLDPNMKDCAFADAVEKLQKVIVDSMLSSKENIDQDILKKVPSKL IGAVLASQLGKEQFKHLQLLSPEKLIAENEPTHCIEHPNSPIESKQLLLQAHETELLDLK KMFQDVKVNFRSLQTQFRDDMAKLGENIQDLSKAALGYNQAVKENRNLYNMLQELRGNIR VFCRIRPLLHSESISSIEHVGTDGSVMVCDPVKPQSAHKIFQFNKVFGPTTTQDEVYKET QPLVRSVMDGYNVCIFAYGQTGSGKTHTMCGPSGGLSKDYGINYMALNDLFNISTSREDV KYDIRVQMVEIYNEQVRDLLNEDRSSTKLDIRASLNNGLSNLPDAKICPVQSPSDVINLM QLGEKHRASGSTAMNHRSSRSHSILTVHVNGKDIAGNVSRSSLHLVDLAGSERVDRSEAT GDRLKEAQHINKSLSCLGDVINALAQKNSHIPYRNSKLTQLLQSSLGGNAKMLMFAHISP DAESCAETLSTLKFAQRASTVELGTALANKESSEVRELKEQVDTLKKALASKE

Transcript Sequence

Transcript ID	Zm00001d039617_T024
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:9150699:9161852:-1 gene:Zm00001d039617 gene_biotype:protein_coding transcript_biotype:protein_coding description:P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
Sequence	ACGGCCCTTCAGCCCTCTTCCTGCTCCCCCTCCTCGTCTCCTTCCATCGAAGCTTCTACG CCCTCGCCGAAGGCCCTTGCCCGGGGAGCGCGAGGCGCAGTCATGACGGAGCCGCGCAGG GTGTCGTTCCGCGACGGCTGCCTCGCGTCGCGGAAGGCCGAGGAAGCAGCATGGAGGCGG CATCAGGCTGCAGCCTGGCTCCAAGCAATGGTGGGCTCCTTGGGCCTGCCTCCTTATCCG TCGGAGCAAGAGTTTGTTGCTTCTCTAAGGAATGGCATTGTCCTATGCAAGGCAATCAAC AAGTTACAGCCTGGTGCCGTGACAAAGATTATCACAAATGCCCCCAGCAATAGCCAGCCG TTGACGGCTTTTCAGTATTTCGAGAACATCCGCAACTTCTTAGTCGCTGTCAACAAACTG AAGCTGACGAGTTTTGAGGCATCTGACTTAGATAAGGACAATCTTGATGCTGGGACGGTT GGCAAGATTGTTGACTGTGTCATTTCATTGAAGTCTTACCATGAATGGAAGCAAGCCGGC GGAGCCAATGGGCCTAACAAGTACATGAAATCACCTCTTGCAGTGCGTTCTTCGCAGATT CAATCCGAAAATGTTGCTTCGGGACCTTCTCCCTCCCTAAAGCGTCTAGACTTGACTGAG GTTGATGCTGACACACAGACATTTCAAAATCTAGATCCTAACATGAAAGATTGTGCATTT GCAGACGCAGTGGAGAAACTTCAGAAAGTTATAGTAGATTCTATGTTGAGTTCTAAGGAA AATATTGACCAAGACATTCTGAAAAAGGTTCCATCAAAGCTTATTGGTGCTGTTTTAGCA AGCCAACTGGGAAAAGAACAGTTCAAACATCTTCAGCTTTTATCTCCGGAAAAGCTTATA GCGGAGAATGAGCCAACTCATTGTATTGAGCATCCCAACTCACCGATTGAGAGCAAACAA TTGCTGTTGCAAGCACATGAAACTGAACTTTTGGACCTCAAGAAAATGTTTCAAGATGTT AAAGTCAACTTCAGGTCTTTGCAGACCCAATTTCGAGATGACATGGCCAAATTAGGTGAA AATATCCAAGATCTTTCCAAAGCTGCCCTTGGTTATAACCAAGCCGTAAAAGAAAACAGA AATTTGTATAACATGCTTCAAGAACTGCGAGGAAATATCCGAGTCTTCTGCCGGATAAGG CCACTTCTTCATTCAGAGTCTATTTCTTCAATTGAACATGTTGGAACCGATGGCTCAGTG ATGGTCTGTGATCCAGTTAAACCACAAAGTGCACATAAAATATTCCAGTTCAACAAAGTT TTTGGGCCAACAACTACTCAAGATGAAGTGTATAAGGAGACACAACCTTTGGTTAGATCC GTCATGGATGGATATAATGTATGCATATTTGCTTACGGTCAGACAGGTTCCGGCAAAACC CATACAATGTGTGGCCCATCTGGTGGGCTGTCCAAGGATTATGGAATTAATTACATGGCC TTGAATGATCTCTTCAACATATCAACTTCTAGAGAAGATGTCAAGTACGACATACGGGTG CAGATGGTTGAAATATACAATGAACAAGTTCGTGATCTTCTAAATGAGGACAGATCAAGC ACAAAATTAGATATAAGGGCTTCCTTGAACAATGGTCTATCCAACCTTCCAGATGCAAAG ATCTGCCCAGTGCAGTCCCCTTCTGATGTTATCAATTTGATGCAGTTGGGTGAAAAGCAC CGAGCTTCCGGATCAACAGCAATGAACCATAGGAGCAGTCGTTCCCACAGTATCTTAACT GTCCATGTAAATGGAAAGGACATTGCTGGCAATGTGAGCCGTAGCAGTTTGCATTTGGTA GATCTTGCAGGAAGCGAAAGGGTTGATAGGTCAGAAGCCACAGGAGACAGATTAAAAGAG GCTCAGCATATTAACAAGTCACTCTCCTGCCTTGGAGATGTCATCAACGCATTAGCTCAG AAGAACTCTCACATTCCTTATAGAAATAGTAAACTCACCCAACTACTACAAAGTTCATTA GGGGGGAATGCAAAAATGCTAATGTTTGCCCACATAAGTCCGGATGCAGAATCTTGTGCA GAAACCCTTAGTACACTAAAATTTGCTCAGAGGGCTTCTACTGTAGAACTTGGGACTGCA CTCGCAAACAAAGAAAGCAGTGAAGTAAGAGAGCTTAAGGAACAGGTAGATACTCTGAAA AAGGCATTAGCAAGTAAAGAACT