Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039594_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:8560758:8564979:1 gene:Zm00001d039594 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 4a
Sequence	ATGGCGACCACCGAGGACTCCGCCGCCGCGGGCGAGGCCCGACGCCTGTTCGCCCTCCTC GAGTCCCAGCAGCAGGTACTCTCTGACTGCCACGGCGCCTGGTCGCGCGCCCTCGCACAC TTTGCCTCGCGCGAGGAGGACCTCGCCTCCCGCTCCGCTGCACTCGACGAAGCCCTAGCC GCCGCCGACGTTTCCACTTCCGAGACTCTCGCAGCGCTCGAGGCCCGCGAGTCCTCCATT CCCGCGCGCCTCGCTGAGGCCTCCGCCGCGCTCTCCGCCGCCGTCGCTGAGGCCGAGACT GAATCCACCGGGCCACCACCCACCGACATCAAGGGCGCGCTCCGGTGGATATGCCGCCGC ATGGACGCTGCTGCGCTCTGGCGCTTCATGGCCGCACGCCGCCGGGAGCTCGCGGTAGTC CGGAGGGAGGCCGGCCCCGCCGTCGCCATGGCCGTCGACCCGCCCCGCCTTGTCCTCGAC GTGGTAAGCGATTTCTTAGCCGCTGGCGACGGCGTCGGCGGGGACCAATGCTGGGTGCTC GGCATGTTGCTGCGCTCTTTGTTCGATTTGGATGGCAGGAAGCCTCCCGAGATAGGAGAT ACATTGGTTGAGAGGGCGTTTGCAGTAACCAAAGAGTGGCAAGAGCGCTTTGGGATCAAT ATGGACAATTTGTCTTCTGAAGACAAGGAGGTGGAGATGGCCGAAGCTGATGGGTCAGAG AACTCAGGAGCAACAGAGAAGAAAGAAGGAAAAGAAGATGAGGAGCAGGAGGAGGTGGAG GAAGAGGACGAGGAAGAGGAAGAGGAGGAAGACCCAGAGGAGGAGGAGGAAGAGGAGGAG GAGGATGACCCAGAGGAAGTAGAGGAACCTGAGGCACCAGGAAAGGAAGGGAATGAGGTG AAGGGAGAAGGGGCAGAGGGAAAGGTGTCTGAGGAGGGAGAAGGGGCAGGGGGGAAGGTG TCTGAGGAGGGAGAAGGGGCAGAGGGAAGGGTGTCTGAGGAGGGACAAGGGGCAGAGGGT AAGGTGTCTCAGGAGGGACAAGGGGCAGAGAAAATAGGACATGAGGATGAGAAGAAGGGA GCAGCAGTGGGCACCATGAAAGTGAAGACGGGAGAAGAAGGTAATAAGGGTGCATCAGAG CAATCGGAGGCACAGATATTTGTGCAGATGGTAGCGGCATTTGGATTGAAGGATAAGTTC GATGAGGAGTTCTTGAGAAGGCTGTTTGTTGCTAATGGACGGAAGAGGGAGCTTGCTAGG ATTGCATGCGTGCTTGGATTTGAGGAAAGCCTTGGAGATATTGTTGAGGAACTAATAAAG TCAGGGAATGCTATAGAGGCTATATATGTTGCCCATGAGGCTGATTTGCTTGGGAAATTT CCACCTGTGCCTCTCTTCAAATCTTATCTGCAGAATTCCACTGATAAGGCTCAGGCAGTG TTGAAAAGTGGAAGACATTCCAGTTCTGCACTTGAAGAGGCAAACAGCTTGGAGGGCAAT GCATACAGGTCCGTCATAAGGTGCGTCGAGTCCTGCCAGCTACAATCGGTGTTTCCTTTA GAGGTCCTGAGGAAGAAGTTAGGGAAGTTGGAGAAAGAGAAGTCTGATAGGAAGAAGGCA GCTGGTCCAAGCAGATTCCCGAACAAGCGATCCCGCGGCGCAGCTGGACCCTATCCCTTC CCTGCTGCCAAGGCTGCTAGGGGCTCAAGCTTTGGTCCGCGTTTCCAGAACCCAGTCTCA CGTTCCTTAAACTACGCACCTCATGCTGGATATATAAACCCAGCAGCTGCATCACCATTC TCTGTCCCTGGGAGCGTGTCGGGGAGACGAGGTGGTGTACCATATGGCGGACCTGGAGCC ACGTATGGTGGCTCCCCTAGCTTTGCAACCGGTGGTGGGCAGCAACCATTCCGTCGTTAG

Peptide Sequence

PEP ID	Zm00001d039594_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:8560758:8564979:1 gene:Zm00001d039594 transcript:Zm00001d039594_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 4a
Sequence	MATTEDSAAAGEARRLFALLESQQQVLSDCHGAWSRALAHFASREEDLASRSAALDEALA AADVSTSETLAALEARESSIPARLAEASAALSAAVAEAETESTGPPPTDIKGALRWICRR MDAAALWRFMAARRRELAVVRREAGPAVAMAVDPPRLVLDVVSDFLAAGDGVGGDQCWVL GMLLRSLFDLDGRKPPEIGDTLVERAFAVTKEWQERFGINMDNLSSEDKEVEMAEADGSE NSGATEKKEGKEDEEQEEVEEEDEEEEEEEDPEEEEEEEEEDDPEEVEEPEAPGKEGNEV KGEGAEGKVSEEGEGAGGKVSEEGEGAEGRVSEEGQGAEGKVSQEGQGAEKIGHEDEKKG AAVGTMKVKTGEEGNKGASEQSEAQIFVQMVAAFGLKDKFDEEFLRRLFVANGRKRELAR IACVLGFEESLGDIVEELIKSGNAIEAIYVAHEADLLGKFPPVPLFKSYLQNSTDKAQAV LKSGRHSSSALEEANSLEGNAYRSVIRCVESCQLQSVFPLEVLRKKLGKLEKEKSDRKKA AGPSRFPNKRSRGAAGPYPFPAAKAARGSSFGPRFQNPVSRSLNYAPHAGYINPAAASPF SVPGSVSGRRGGVPYGGPGATYGGSPSFATGGGQQPFRR

Transcript Sequence

Transcript ID	Zm00001d039594_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:8560758:8564979:1 gene:Zm00001d039594 gene_biotype:protein_coding transcript_biotype:protein_coding description:FRIGIDA-like protein 4a
Sequence	AAGTCCATCTAGACCGTTCCTCCTCTAATCCCCATCCTCGCTCCCCCCAACCCTCACCGC CATGGCGACCACCGAGGACTCCGCCGCCGCGGGCGAGGCCCGACGCCTGTTCGCCCTCCT CGAGTCCCAGCAGCAGGTACTCTCTGACTGCCACGGCGCCTGGTCGCGCGCCCTCGCACA CTTTGCCTCGCGCGAGGAGGACCTCGCCTCCCGCTCCGCTGCACTCGACGAAGCCCTAGC CGCCGCCGACGTTTCCACTTCCGAGACTCTCGCAGCGCTCGAGGCCCGCGAGTCCTCCAT TCCCGCGCGCCTCGCTGAGGCCTCCGCCGCGCTCTCCGCCGCCGTCGCTGAGGCCGAGAC TGAATCCACCGGGCCACCACCCACCGACATCAAGGGCGCGCTCCGGTGGATATGCCGCCG CATGGACGCTGCTGCGCTCTGGCGCTTCATGGCCGCACGCCGCCGGGAGCTCGCGGTAGT CCGGAGGGAGGCCGGCCCCGCCGTCGCCATGGCCGTCGACCCGCCCCGCCTTGTCCTCGA CGTGGTAAGCGATTTCTTAGCCGCTGGCGACGGCGTCGGCGGGGACCAATGCTGGGTGCT CGGCATGTTGCTGCGCTCTTTGTTCGATTTGGATGGCAGGAAGCCTCCCGAGATAGGAGA TACATTGGTTGAGAGGGCGTTTGCAGTAACCAAAGAGTGGCAAGAGCGCTTTGGGATCAA TATGGACAATTTGTCTTCTGAAGACAAGGAGGTGGAGATGGCCGAAGCTGATGGGTCAGA GAACTCAGGAGCAACAGAGAAGAAAGAAGGAAAAGAAGATGAGGAGCAGGAGGAGGTGGA GGAAGAGGACGAGGAAGAGGAAGAGGAGGAAGACCCAGAGGAGGAGGAGGAAGAGGAGGA GGAGGATGACCCAGAGGAAGTAGAGGAACCTGAGGCACCAGGAAAGGAAGGGAATGAGGT GAAGGGAGAAGGGGCAGAGGGAAAGGTGTCTGAGGAGGGAGAAGGGGCAGGGGGGAAGGT GTCTGAGGAGGGAGAAGGGGCAGAGGGAAGGGTGTCTGAGGAGGGACAAGGGGCAGAGGG TAAGGTGTCTCAGGAGGGACAAGGGGCAGAGAAAATAGGACATGAGGATGAGAAGAAGGG AGCAGCAGTGGGCACCATGAAAGTGAAGACGGGAGAAGAAGGTAATAAGGGTGCATCAGA GCAATCGGAGGCACAGATATTTGTGCAGATGGTAGCGGCATTTGGATTGAAGGATAAGTT CGATGAGGAGTTCTTGAGAAGGCTGTTTGTTGCTAATGGACGGAAGAGGGAGCTTGCTAG GATTGCATGCGTGCTTGGATTTGAGGAAAGCCTTGGAGATATTGTTGAGGAACTAATAAA GTCAGGGAATGCTATAGAGGCTATATATGTTGCCCATGAGGCTGATTTGCTTGGGAAATT TCCACCTGTGCCTCTCTTCAAATCTTATCTGCAGAATTCCACTGATAAGGCTCAGGCAGT GTTGAAAAGTGGAAGACATTCCAGTTCTGCACTTGAAGAGGCAAACAGCTTGGAGGGCAA TGCATACAGGTCCGTCATAAGGTGCGTCGAGTCCTGCCAGCTACAATCGGTGTTTCCTTT AGAGGTCCTGAGGAAGAAGTTAGGGAAGTTGGAGAAAGAGAAGTCTGATAGGAAGAAGGC AGCTGGTCCAAGCAGATTCCCGAACAAGCGATCCCGCGGCGCAGCTGGACCCTATCCCTT CCCTGCTGCCAAGGCTGCTAGGGGCTCAAGCTTTGGTCCGCGTTTCCAGAACCCAGTCTC ACGTTCCTTAAACTACGCACCTCATGCTGGATATATAAACCCAGCAGCTGCATCACCATT CTCTGTCCCTGGGAGCGTGTCGGGGAGACGAGGTGGTGTACCATATGGCGGACCTGGAGC CACGTATGGTGGCTCCCCTAGCTTTGCAACCGGTGGTGGGCAGCAACCATTCCGTCGTTA GGTCTAGGGCTGTTTGTTGTAACTGAATGCTCCTTGTTTTCTGGCTAATAGGGATAATGT ATGCCTCCAGCTATTCAAGCATACTTGTTCAGTTCTTGATGGATGCTGGATATTGAACGT CGTGTAGTACACATTCTATGGTACTGTGTTTGCTTTGTTAAATTTGAACTGTGTCTTCCA TAATTTTGTGGCGCAGGCATACGTGGGCTTC