Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039578_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:3:8255421:8260167:1 gene:Zm00001d039578 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine--tRNA ligase chloroplastic/mitochondrial
Sequence	ATGGCGGCGTGGTCGTCGCCGCCGTCGCTTCGCCACCTCCTCATGCTCCGTCCATGCTTG CCCCTCAGCCCCACCTGCCTTGCTGGCTCCTTGCGCCGCCACATCCACAGCCGCTGCCGC CTCTTCTCCTCCGCCGCATCCTCCTCGACACTGACCCACGGCGACATCGCCTCGACGCAC GGTGACGCCGATGGCGTCGTCGAAGTCAACCCTCCGCGCGGAACTAGGGATTTCCCGCCG GAGGACATGCGGCTCCGCACCTGGCTCTTCGACCAATTCAGGGAGGTCTCCCGCCTCATG GCCTTCGAGGAGGTCGATTTCCCCGTCCTCGAGTCGGAGGCTCTCTTCATCCGGAAGGCA GGGGAAGAAATTACGCAGCAGCTCTACAACTTCGAGGACAAAGGGGGTCGCCGTGTTGTT CTCAGGCCCGAAATTACCCCTTCCCTCGCGCGCCTAGTCATAAAGCAAGGAAAATCAGTC TCCCTTCCACTGAAATGGTTTACTATAGGACAATGCTGGCGATATGAGCGCATGACCAGA GGAAGAAGGCGGGAACATTACCAATGGAATATGGATATATTTGGTGTGCCTAAAGCTGAG GCTGAGCTTCTTCATGCTATTGTTCTCTTATTTCAACGTCTTGGAATTACATCTTCAGAT GTGGGGATCAGGGTGTCCAGTCGGAAGGTTCTTCAGGCTGTTTTGAACATGTACTCCATC CCAGATCACTTATTCACTCAAGTTTGTGTTATTGTTGATAAATTGGGTAAAATGACTAGG GAAGAAATTGAGAAGGAACTTGTTTCAACTGGGTTGTCATCTGAAGCTGTACAGGGTATC ATCGATGTGCTTTCAATCAAGTCATTGTCCAAACTTGAAGAGGTGTTAGGCTCTGATGTT GAAGCTGTTGCTGACTTGAAGAAACTCTTCTCCTTTGCGGAGCAATATGGTTATGCTGAT TGGATTTGTTTTGATGCATCAGTGGTCCGTGGCCTTGCATACTACACAGGAATTGTATTT GAGGCATTTGATAGAGAAGGAAAACTGAGAGCAATTTGCGGTGGTGGAAGGTATGATAGA TTGCTTTCAACATTTGGAAGTGAAGATATACCGGCTTGTGGCTTTGGATTTGGAGACGCT GTTATAGTGGAACTGCTGAAAGAAAAGGGTCTCTTGCCTGATATGTCACGCCAAATTGAT GACATTGTCTTCCCTTTGGACGAAGAACTTGAAGGACCAGCATCCAGTATTGCTTCCTCT CTGAGGAAGAAAGGCCGATCTGTTGAACTTGTAGAAGACAAACGTCTCAAATGGGTATTT AAGCATGCGGAGAGGATCAATGCGAGCCGGCTGATATTGGTTGGAAATTCTGAGTGGGAG CGAGGCATGGTACGCGTAAAGGTGCTATCAACCAGGGAAGAGTTTGAGGTAAAGACAAGT GAACTAGAGTGA

Peptide Sequence

PEP ID	Zm00001d039578_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:3:8255421:8260167:1 gene:Zm00001d039578 transcript:Zm00001d039578_T004 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine--tRNA ligase chloroplastic/mitochondrial
Sequence	MAAWSSPPSLRHLLMLRPCLPLSPTCLAGSLRRHIHSRCRLFSSAASSSTLTHGDIASTH GDADGVVEVNPPRGTRDFPPEDMRLRTWLFDQFREVSRLMAFEEVDFPVLESEALFIRKA GEEITQQLYNFEDKGGRRVVLRPEITPSLARLVIKQGKSVSLPLKWFTIGQCWRYERMTR GRRREHYQWNMDIFGVPKAEAELLHAIVLLFQRLGITSSDVGIRVSSRKVLQAVLNMYSI PDHLFTQVCVIVDKLGKMTREEIEKELVSTGLSSEAVQGIIDVLSIKSLSKLEEVLGSDV EAVADLKKLFSFAEQYGYADWICFDASVVRGLAYYTGIVFEAFDREGKLRAICGGGRYDR LLSTFGSEDIPACGFGFGDAVIVELLKEKGLLPDMSRQIDDIVFPLDEELEGPASSIASS LRKKGRSVELVEDKRLKWVFKHAERINASRLILVGNSEWERGMVRVKVLSTREEFEVKTS ELE

Transcript Sequence

Transcript ID	Zm00001d039578_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:8255421:8260167:1 gene:Zm00001d039578 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histidine--tRNA ligase chloroplastic/mitochondrial
Sequence	GGCTACCCGCCGCGCCGCAAACCCGAGCCACTCGCCTGCCGCGCTGATTAGATTTCTTTG CATCCGCCAGTGGAGTCGAATCGATGGCGGCGTGGTCGTCGCCGCCGTCGCTTCGCCACC TCCTCATGCTCCGTCCATGCTTGCCCCTCAGCCCCACCTGCCTTGCTGGCTCCTTGCGCC GCCACATCCACAGCCGCTGCCGCCTCTTCTCCTCCGCCGCATCCTCCTCGACACTGACCC ACGGCGACATCGCCTCGACGCACGGTGACGCCGATGGCGTCGTCGAAGTCAACCCTCCGC GCGGAACTAGGGATTTCCCGCCGGAGGACATGCGGCTCCGCACCTGGCTCTTCGACCAAT TCAGGGAGGTCTCCCGCCTCATGGCCTTCGAGGAGGTCGATTTCCCCGTCCTCGAGTCGG AGGCTCTCTTCATCCGGAAGGCAGGGGAAGAAATTACGCAGCAGCTCTACAACTTCGAGG ACAAAGGGGGTCGCCGTGTTGTTCTCAGGCCCGAAATTACCCCTTCCCTCGCGCGCCTAG TCATAAAGCAAGGAAAATCAGTCTCCCTTCCACTGAAATGGTTTACTATAGGACAATGCT GGCGATATGAGCGCATGACCAGAGGAAGAAGGCGGGAACATTACCAATGGAATATGGATA TATTTGGTGTGCCTAAAGCTGAGGCTGAGCTTCTTCATGCTATTGTTCTCTTATTTCAAC GTCTTGGAATTACATCTTCAGATGTGGGGATCAGGGTGTCCAGTCGGAAGGTTCTTCAGG CTGTTTTGAACATGTACTCCATCCCAGATCACTTATTCACTCAAGTTTGTGTTATTGTTG ATAAATTGGGTAAAATGACTAGGGAAGAAATTGAGAAGGAACTTGTTTCAACTGGGTTGT CATCTGAAGCTGTACAGGGTATCATCGATGTGCTTTCAATCAAGTCATTGTCCAAACTTG AAGAGGTGTTAGGCTCTGATGTTGAAGCTGTTGCTGACTTGAAGAAACTCTTCTCCTTTG CGGAGCAATATGGTTATGCTGATTGGATTTGTTTTGATGCATCAGTGGTCCGTGGCCTTG CATACTACACAGGAATTGTATTTGAGGCATTTGATAGAGAAGGAAAACTGAGAGCAATTT GCGGTGGTGGAAGGTATGATAGATTGCTTTCAACATTTGGAAGTGAAGATATACCGGCTT GTGGCTTTGGATTTGGAGACGCTGTTATAGTGGAACTGCTGAAAGAAAAGGGTCTCTTGC CTGATATGTCACGCCAAATTGATGACATTGTCTTCCCTTTGGACGAAGAACTTGAAGGAC CAGCATCCAGTATTGCTTCCTCTCTGAGGAAGAAAGGCCGATCTGTTGAACTTGTAGAAG ACAAACGTCTCAAATGGGTATTTAAGCATGCGGAGAGGATCAATGCGAGCCGGCTGATAT TGGTTGGAAATTCTGAGTGGGAGCGAGGCATGGTACGCGTAAAGGTGCTATCAACCAGGG AAGAGTTTGAGGTAAAGACAAGTGAACTAGAGTGATTGTAGAAATGTTACGTTATGCTAG CCTCGGCTAATGCTTGTGAGATGATACAATCAAACAGTAGCTAGCTATTTCTGGAGAGTT TAAACTTATTGTAACAGCCTGTAACAACTATTCATATTCATACAGAATGGATGGGCATGA TCCTTGCCAGCTAGTATGC