Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039568_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:8111485:8115791:-1 gene:Zm00001d039568 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polynucleotide 5'-hydroxyl-kinase NOL9
Sequence

ATGGCCGGCGCCCGCGGCCGCGCGACGCCGACGCGAACACCTCCGCGGTCGTCTTCCCCG
GCGCCCCGCACCGAGGCGGTAGTCCCGCCGGACTGGGACTCCGCTGTATCGACCGTCTCC
TCCCACCCCTCGCCCCCGGTGGTCGTCGTGTGCGGGCCCAAGAACAGCGGCAAGTCCACC
TTCTCCCGCGTCCTCCTCAACGCGCTGCTCCCCAGGCATGGTAAGGTTGCTTATCTGGAC
ACCGACGTGGGGCAGCCAGAGTTCGGGCCGCCGGGATGCCTCTCGTTCAATGTCCTCGAC
GAAGCTATTGCAGATTTGATGAACCCAAGCCTACGGGAAGCTGAAAGGTGCTACTTCTTT
GGTGACATTTCATCGAAAAGAGATCCAGAAGCATATCTGAATTGTCTATTCCATTCGTAT
GACTACTTTGTTGGAAAATATCGATGCGATGAGAATGAAATGCTGCCACTAATTGTCAAT
ACACCTGGATGGGTAAAAGGTGCTGGCTTTGATATGCTCGTAGAGATGCTAAGGTATATC
TGCCCCACAATAGTTGTTCAGATACGCATCACAATCAAGAACAAAAATCTCCCTGATGGA
GGGTTTTGGTTAGATGGTGGGCAAACAGGACCTATGATGATTAACATCGATGCTGCATTT
CATGATGCCTCAAATAGATCGTTGTTAATTCAGAAAGATTCATGTGGAATGCGTGAACGC
CGACTTGTAGAGTACTTGAAACAATGTTTTCCAAGCAACATCTCTCTTTCAACTAATAAG
GAGCTTGCTTATGCCCTAGCTTCACTTCCACCTTATCAAGTACCATTTTCAGATGTTGCA
ATTGTGCATCTTCATTGTAAGGTACCTGCTGGTGAGATATGGCATAGTCTGAATGCAACC
ATAGTTGGTTTGGCAGTTTCCAATGCATCTGAGGGAACCAGATCAATCCCTTACTGTGTT
GGGCTTGGCATCATAAGGGGCGTCGATATTCAAAAAGGCCTGTTATATTTAATAACTCCT
GTTCCTCTCCAGCGCCTGCAATGCGTTGATCTTTTGCAACAGGGTCTCATTGAGATACCT
ACTGCTCTTTTGCAGGTCCGCGGATGTGTGTCCCCCTACATGTCGACGAATGTGCTTCAC
AAGATATCAGAAAGGGATTTGTATGCTGGGTGA

Peptide Sequence

PEP ID

Zm00001d039568_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:8111485:8115791:-1 gene:Zm00001d039568 transcript:Zm00001d039568_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polynucleotide 5'-hydroxyl-kinase NOL9
Sequence

MAGARGRATPTRTPPRSSSPAPRTEAVVPPDWDSAVSTVSSHPSPPVVVVCGPKNSGKST
FSRVLLNALLPRHGKVAYLDTDVGQPEFGPPGCLSFNVLDEAIADLMNPSLREAERCYFF
GDISSKRDPEAYLNCLFHSYDYFVGKYRCDENEMLPLIVNTPGWVKGAGFDMLVEMLRYI
CPTIVVQIRITIKNKNLPDGGFWLDGGQTGPMMINIDAAFHDASNRSLLIQKDSCGMRER
RLVEYLKQCFPSNISLSTNKELAYALASLPPYQVPFSDVAIVHLHCKVPAGEIWHSLNAT
IVGLAVSNASEGTRSIPYCVGLGIIRGVDIQKGLLYLITPVPLQRLQCVDLLQQGLIEIP
TALLQVRGCVSPYMSTNVLHKISERDLYAG

Transcript Sequence

Transcript ID

Zm00001d039568_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:8111485:8115791:-1 gene:Zm00001d039568 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polynucleotide 5'-hydroxyl-kinase NOL9
Sequence

AGGAGTGATGAACTTGGGCTCGCGCCGCTCCGCGCTCTGCCCTCTGCGAACCACGACGAG
GTCTTCCTGACATGGCCGGCGCCCGCGGCCGCGCGACGCCGACGCGAACACCTCCGCGGT
CGTCTTCCCCGGCGCCCCGCACCGAGGCGGTAGTCCCGCCGGACTGGGACTCCGCTGTAT
CGACCGTCTCCTCCCACCCCTCGCCCCCGGTGGTCGTCGTGTGCGGGCCCAAGAACAGCG
GCAAGTCCACCTTCTCCCGCGTCCTCCTCAACGCGCTGCTCCCCAGGCATGGTAAGGTTG
CTTATCTGGACACCGACGTGGGGCAGCCAGAGTTCGGGCCGCCGGGATGCCTCTCGTTCA
ATGTCCTCGACGAAGCTATTGCAGATTTGATGAACCCAAGCCTACGGGAAGCTGAAAGGT
GCTACTTCTTTGGTGACATTTCATCGAAAAGAGATCCAGAAGCATATCTGAATTGTCTAT
TCCATTCGTATGACTACTTTGTTGGAAAATATCGATGCGATGAGAATGAAATGCTGCCAC
TAATTGTCAATACACCTGGATGGGTAAAAGGTGCTGGCTTTGATATGCTCGTAGAGATGC
TAAGGTATATCTGCCCCACAATAGTTGTTCAGATACGCATCACAATCAAGAACAAAAATC
TCCCTGATGGAGGGTTTTGGTTAGATGGTGGGCAAACAGGACCTATGATGATTAACATCG
ATGCTGCATTTCATGATGCCTCAAATAGATCGTTGTTAATTCAGAAAGATTCATGTGGAA
TGCGTGAACGCCGACTTGTAGAGTACTTGAAACAATGTTTTCCAAGCAACATCTCTCTTT
CAACTAATAAGGAGCTTGCTTATGCCCTAGCTTCACTTCCACCTTATCAAGTACCATTTT
CAGATGTTGCAATTGTGCATCTTCATTGTAAGGTACCTGCTGGTGAGATATGGCATAGTC
TGAATGCAACCATAGTTGGTTTGGCAGTTTCCAATGCATCTGAGGGAACCAGATCAATCC
CTTACTGTGTTGGGCTTGGCATCATAAGGGGCGTCGATATTCAAAAAGGCCTGTTATATT
TAATAACTCCTGTTCCTCTCCAGCGCCTGCAATGCGTTGATCTTTTGCAACAGGGTCTCA
TTGAGATACCTACTGCTCTTTTGCAGGTCCGCGGATGTGTGTCCCCCTACATGTCGACGA
ATGTGCTTCACAAGATATCAGAAAGGGATTTGTATGCTGGGTGATGTTGGCGCAGGCAGT
GTCGGAGATAGACCTGTGTTTGCTGGTTTCTGACCCGGAGAGCATGAACCGGACTGTAGT
TTCAGGCTGCCAGCGGTTGCCTCCAGCTCCTAAGATTAGATATGTAACCTGTGCTGTGCA
ACTCCTCTGTCAAATTAGTAGTCACGGAGATCTGAATGCAACTTCCTGGATTCATTGAAT
TGAAATACTATAATTCTGTGGCAAGTTACTCCCTTTGCTTTTGCCTTTGAATTGATTAGT
ATAGAGAAAGATATTGATTAATTGGTATCTTGGTATTATTTAAAGAAAGAGTGGTATATC
TTAGACCCC