Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039518_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:3:6556410:6561838:1 gene:Zm00001d039518 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:eukaryotic initiation factor3 description: eukaryotic initiation factor3
Sequence

ATGGTGAAGAAAATGCCAAAACCATCTATCTTGGTGGTCTATTATGCAAAGTTGACTGAG
ATCTTCTGGATATCGGACAGCCACTTATATCATGCGTATGCGTGGCTCAAGCTTTTCAAC
TTGCAGAAGAGCTACAATAAAAACTTGTCTCAGAAGGATCTACAGTTAATAGCATCTTCT
GTTTTACTTGCTGCACTATCCGTGTCACCTTATGACAAAAAATATGGTGCATTTGAGACA
GAGAATGAGAAAGAGCGCAACATGCGTCTGTCCAACCTTGTTAACTTTTCGCTTGATAAC
AAGCGTGAAAACAGGGAAATGCCTTCAAGACCATATCTTCTATCAGAGTTGGCCTCCAAA
GGAGTCCTTTCATGTGCTTCCCAAGAAGTGCGAGATTTGTACAACCTTTTGGAACATGAG
TTTCTACCTCTGGATCTTGCATCAAAAGTGCAGCCACTTCTTTTGAAGATTTCAAAGATT
GGAGGGAAGCTTTCATCAGCTTCTTCTGTTCCTGAGGTCAAGTTATCTCAGTACATTTCA
GCATTGGAGAAGCTGACAACATTGAGAGTGCTACAACAGGCCTCTTGTATTTTTAAATCC
ATAAAGATTGATATGCTCTCAAGAATGATTCCATTCTTTGACTTCTCTGTCGTGGAGAAG
ATTTCTGTTGATGCTGCCAAACAAAATTTTGTTGCTATAAAAGTTGACCATTTATCGGGA
GTTGTTCAGTTTGGTACTGTGGACATAGAATCTGATGGCTTAAGTGATCACCTTAGTGTT
CTTGCTGATTCATTAAATAAAGCAAGGATTCATATCTGTCCACCAGTGAAAAAGCCATCT
AAACTCGGTGAAAGTCTCATTAGTTTGGCTGCAATAGTGGAGAATGAACATAAGAGGCTG
CTTGCAAGGAAGTCCATCATTGAAAAACGTAAAGAAGAGCTTGAGCGTCAAATATTGGAG
AAGGAAAAAGAAGAAGAAAAAAAGAGAATGAGCAGTCAAAAGAAAACTGTGGATGAGGAA
AGGGTGAGGCTTCTCAATGAACAGAGGCAGAGGGAGCAGGACCGGATTCGTAGAGAGATA
GAGGAAAAAAATAAAGCAGAAGCAAAAAAGATGCTAGAAGATTTGAATAAGGCAGGGAAA
AAACATGTCGTTGTTGAAGGGGAGCTTACTAAGGAGGCCATCATGGAATTGGCACGGAAT
GAACAGTTAAAGGAGCGCCACGAAATGGAGAAAAAACTGCAGAAGTTTGCAAAAACAATG
GATTATCTGGAAAGGGCAAAAAGGCAGGAAGAGGCACCACTGATTGAGCAAGCTTTTCAA
AAACGTCTTGAGGAAGAGAAGATCCTTCACGAGCAAGAGCAGCTTCGGGAGATTGAACTC
AGCAAGCAACACCATGCCAGCGACTTGCAAGAGAAAAATAGACTTTCACGGATGTTGGAG
CACAAGAATGCTTTACAGGAGAGAATCATCCAAGAACGTGCAGCTGAGTTTGGCCGTCTG
AAGAAAGAGAGAGATGAACGGATGAATCGGTTGATATCTTCAAGAAAGCATGAAAGGGAG
ACAGTAAGGAAGTTGATGTTTTATCTAGCCACCTCGAGAGTCAGCAGCAGCGCCTGCAGC
TGCTGCGGCGGCGGCTGCTCCTGCTCCTGCTCCTAG

Peptide Sequence

PEP ID

Zm00001d039518_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:3:6556410:6561838:1 gene:Zm00001d039518 transcript:Zm00001d039518_T012 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:eukaryotic initiation factor3 description: eukaryotic initiation factor3
Sequence

MVKKMPKPSILVVYYAKLTEIFWISDSHLYHAYAWLKLFNLQKSYNKNLSQKDLQLIASS
VLLAALSVSPYDKKYGAFETENEKERNMRLSNLVNFSLDNKRENREMPSRPYLLSELASK
GVLSCASQEVRDLYNLLEHEFLPLDLASKVQPLLLKISKIGGKLSSASSVPEVKLSQYIS
ALEKLTTLRVLQQASCIFKSIKIDMLSRMIPFFDFSVVEKISVDAAKQNFVAIKVDHLSG
VVQFGTVDIESDGLSDHLSVLADSLNKARIHICPPVKKPSKLGESLISLAAIVENEHKRL
LARKSIIEKRKEELERQILEKEKEEEKKRMSSQKKTVDEERVRLLNEQRQREQDRIRREI
EEKNKAEAKKMLEDLNKAGKKHVVVEGELTKEAIMELARNEQLKERHEMEKKLQKFAKTM
DYLERAKRQEEAPLIEQAFQKRLEEEKILHEQEQLREIELSKQHHASDLQEKNRLSRMLE
HKNALQERIIQERAAEFGRLKKERDERMNRLISSRKHERETVRKLMFYLATSRVSSSACS
CCGGGCSCSCS

Transcript Sequence

Transcript ID

Zm00001d039518_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:6556410:6561838:1 gene:Zm00001d039518 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:eukaryotic initiation factor3 description: eukaryotic initiation factor3
Sequence

GACCATGGTGAAGAAAATGCCAAAACCATCTATCTTGGTGGTCTATTATGCAAAGTTGAC
TGAGATCTTCTGGATATCGGACAGCCACTTATATCATGCGTATGCGTGGCTCAAGCTTTT
CAACTTGCAGAAGAGCTACAATAAAAACTTGTCTCAGAAGGATCTACAGTTAATAGCATC
TTCTGTTTTACTTGCTGCACTATCCGTGTCACCTTATGACAAAAAATATGGTGCATTTGA
GACAGAGAATGAGAAAGAGCGCAACATGCGTCTGTCCAACCTTGTTAACTTTTCGCTTGA
TAACAAGCGTGAAAACAGGGAAATGCCTTCAAGACCATATCTTCTATCAGAGTTGGCCTC
CAAAGGAGTCCTTTCATGTGCTTCCCAAGAAGTGCGAGATTTGTACAACCTTTTGGAACA
TGAGTTTCTACCTCTGGATCTTGCATCAAAAGTGCAGCCACTTCTTTTGAAGATTTCAAA
GATTGGAGGGAAGCTTTCATCAGCTTCTTCTGTTCCTGAGGTCAAGTTATCTCAGTACAT
TTCAGCATTGGAGAAGCTGACAACATTGAGAGTGCTACAACAGGCCTCTTGTATTTTTAA
ATCCATAAAGATTGATATGCTCTCAAGAATGATTCCATTCTTTGACTTCTCTGTCGTGGA
GAAGATTTCTGTTGATGCTGCCAAACAAAATTTTGTTGCTATAAAAGTTGACCATTTATC
GGGAGTTGTTCAGTTTGGTACTGTGGACATAGAATCTGATGGCTTAAGTGATCACCTTAG
TGTTCTTGCTGATTCATTAAATAAAGCAAGGATTCATATCTGTCCACCAGTGAAAAAGCC
ATCTAAACTCGGTGAAAGTCTCATTAGTTTGGCTGCAATAGTGGAGAATGAACATAAGAG
GCTGCTTGCAAGGAAGTCCATCATTGAAAAACGTAAAGAAGAGCTTGAGCGTCAAATATT
GGAGAAGGAAAAAGAAGAAGAAAAAAAGAGAATGAGCAGTCAAAAGAAAACTGTGGATGA
GGAAAGGGTGAGGCTTCTCAATGAACAGAGGCAGAGGGAGCAGGACCGGATTCGTAGAGA
GATAGAGGAAAAAAATAAAGCAGAAGCAAAAAAGATGCTAGAAGATTTGAATAAGGCAGG
GAAAAAACATGTCGTTGTTGAAGGGGAGCTTACTAAGGAGGCCATCATGGAATTGGCACG
GAATGAACAGTTAAAGGAGCGCCACGAAATGGAGAAAAAACTGCAGAAGTTTGCAAAAAC
AATGGATTATCTGGAAAGGGCAAAAAGGCAGGAAGAGGCACCACTGATTGAGCAAGCTTT
TCAAAAACGTCTTGAGGAAGAGAAGATCCTTCACGAGCAAGAGCAGCTTCGGGAGATTGA
ACTCAGCAAGCAACACCATGCCAGCGACTTGCAAGAGAAAAATAGACTTTCACGGATGTT
GGAGCACAAGAATGCTTTACAGGAGAGAATCATCCAAGAACGTGCAGCTGAGTTTGGCCG
TCTGAAGAAAGAGAGAGATGAACGGATGAATCGGTTGATATCTTCAAGAAAGCATGAAAG
GGAGACAGTAAGGAAGTTGATGTTTTATCTAGCCACCTCGAGAGTCAGCAGCAGCGCCTG
CAGCTGCTGCGGCGGCGGCTGCTCCTGCTCCTGCTCCTAGTAAATATATTCCCAAGTTTA
AACGCGGTGGTGATAGCAGCAGCATCCCTTCTGGCAGCCGCGATGAAGATCGCTGGGGTT
CACGTGGTCCGCTCAGGCAAGATGGTCCTCCTGCACGACTGGATGCACCCTCATCACGGC
AAGATACTGATCGCTGGCGTGGATCAAGATTTCCCTCTAACTCAACGTCCTCTTCATCAA
CCTGGAGCCGTTCACGGAACTGATCCTATGCTGCAGGACTTTTTTCTAGCCCATGTGTCG
ACCTCCGTGCACAATGTCTAATCGTACCTTTCCAGGCACTGCACTCCATGCATATTGTCG
CTGTTTTGTACTTTTGTAGTAATACTCTACAATCCATGATTATTGTCCCTGTTTGTTAGT
AATGCTGTTTTATCTGTGCATGAAACACTCTATACCTACATATAGCCAAGAATTGCAGGA
CTATGAGCCTGTTTGTT