Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039517_T008
CDS Infomation

cds chromosome:B73_RefGen_v4:3:6377559:6379559:-1 gene:Zm00001d039517 gene_biotype:protein_coding transcript_biotype:protein_coding description:Clavaminate synthase-like protein

Sequence

ATGGCGAGCTTCTTCAGGGACGCGCGCCTCCCGCAGCAGCGCGTCGTCGAGGGCGTCCCC
TTCCCGGCGGTGCTCGTCCCGAGCGCTCGTGCGGGCTCCTGCGCCGGCGGGGTCGACAAG
TTCCTGGCGGCCGTGCGCTGCGAGAGAGCGTCCCGGCTGGAGCCGCTAGTGCGGGACGCG
GGGGCCCTGCTGCTGCGCGGGTTCCCCGCGACGACGGCCGCCGACTTCGACCGCGCCGTC
GACGCCTTCGGGTACGAGGAGCTGCCGATCGTCGGCAGCGTCGCGCCGCGGACCAACGTC
GTGGGCCGGGTGTTCACCGCCAACGACTCGCCGCCCGATCAGAAGATCCCCTTCCACCAC
GAGATGGCTCAGGTTCCAACATTTCCGTCCAAATTGTTCTTCTTCTGCGAAGTGGAGCCA
AAGAGTGGCGGAGAGACGCCGGTTGTACCGAGCCATTATGTCTACAAGAGGATGAAGGAG
AAATTCCCCGGATTTGTGGAGAAACTGGAGAAGGACATGATTGTATATACAAGGGTTTTA
GGAGAGGGCGATAACCCGTCCTCGTCAATCGGTCGTGGATGGCAATCGACATTTCTCACT
AAAGATAAAGCTGTTGCCGAGGAAAGGTAA

Peptide Sequence

PEP ID

Zm00001d039517_P008
PEP Infomation

pep chromosome:B73_RefGen_v4:3:6377559:6379559:-1 gene:Zm00001d039517 transcript:Zm00001d039517_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Clavaminate synthase-like protein

Sequence

MASFFRDARLPQQRVVEGVPFPAVLVPSARAGSCAGGVDKFLAAVRCERASRLEPLVRDA
GALLLRGFPATTAADFDRAVDAFGYEELPIVGSVAPRTNVVGRVFTANDSPPDQKIPFHH
EMAQVPTFPSKLFFFCEVEPKSGGETPVVPSHYVYKRMKEKFPGFVEKLEKDMIVYTRVL
GEGDNPSSSIGRGWQSTFLTKDKAVAEER

Transcript Sequence

Transcript ID

Zm00001d039517_T008
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:6377559:6379559:-1 gene:Zm00001d039517 gene_biotype:protein_coding transcript_biotype:protein_coding description:Clavaminate synthase-like protein

Sequence

GAAGCCGCGATGGCGAGCTTCTTCAGGGACGCGCGCCTCCCGCAGCAGCGCGTCGTCGAG
GGCGTCCCCTTCCCGGCGGTGCTCGTCCCGAGCGCTCGTGCGGGCTCCTGCGCCGGCGGG
GTCGACAAGTTCCTGGCGGCCGTGCGCTGCGAGAGAGCGTCCCGGCTGGAGCCGCTAGTG
CGGGACGCGGGGGCCCTGCTGCTGCGCGGGTTCCCCGCGACGACGGCCGCCGACTTCGAC
CGCGCCGTCGACGCCTTCGGGTACGAGGAGCTGCCGATCGTCGGCAGCGTCGCGCCGCGG
ACCAACGTCGTGGGCCGGGTGTTCACCGCCAACGACTCGCCGCCCGATCAGAAGATCCCC
TTCCACCACGAGATGGCTCAGGTTCCAACATTTCCGTCCAAATTGTTCTTCTTCTGCGAA
GTGGAGCCAAAGAGTGGCGGAGAGACGCCGGTTGTACCGAGCCATTATGTCTACAAGAGG
ATGAAGGAGAAATTCCCCGGATTTGTGGAGAAACTGGAGAAGGACATGATTGTATATACA
AGGGTTTTAGGAGAGGGCGATAACCCGTCCTCGTCAATCGGTCGTGGATGGCAATCGACA
TTTCTCACTAAAGATAAAGCTGTTGCCGAGGAAAGGTAACGCCATTGCATCTTATAGTAA
GATGGTTTTGTCATGGG