Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039512_T013
CDS Infomation

cds chromosome:B73_RefGen_v4:3:6248782:6252242:1 gene:Zm00001d039512 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hexokinase1 description: hexokinase1
Sequence

ATGGAGAAGCAAGGTCTGGACATGCATGTAGCTGCATTGATTAATGATGCTGTTGGGACG
CTGGCGGGAGCAAGGTACTATGACAAAGATGTTGTCGCTGGTGTAATATTTGGCACTGGC
ACAAACGCAGCATATGTTGAGAAGGCAAATGCTATTCCAAAATGGGAGGGTGAGCTGCCC
CATTCAGGAGACATGGTCATCAACATGGAATGGGGTAACTTCTTCTCATCTCATCTCCCC
ATCACTGAATATGATCAAGAATTAGATAAGGAGAGCTTAAATCCAGGAGAACAGATTTAC
GAGAAGTTAACGTCAGGAATGTATTTAGGTGAAATTGTAAGGAGGGTGCTCCTTAAAATA
TCATTGCAGTCCGCCATTTTTGGTGATATTGACCACACTAAGCTTCAAACCCATTTCCTT
CTGCGGACTCCACATATTTCAGCAATGCACCATGACGAAACATCTGATCTGAAGATTGTG
GCCGAAAATTTTGAAGAAAACCTAGAGATTACAGGCACATCCTTGGAGGCTCGTAAGCTG
GTCGTTGAAATCTGTGACATTGTGGCGACAAGAGCAGCCCGGCTGGCTGCTGCGGGGCTT
GCAGGGATCCTCATGAAGATCGGGAGAGATCACAGCGTCGAGGACCAACGGTCAGTCATC
GCCATCGACGGAGGACTGTTCGAGCACTACACCAAATTCCGCCGGTGCTTGGAGACCACA
CTGGGTGAGCTGCTAGGAGACGAGGCGTCCAAGGCGGTGGCCATCAAGCATGCCGACGAC
GGTTCAGGAATAGGTGCTGCCCTGATTGCAGCTTCACAGTCTCAGTACAAAAACGACTTA
GTGGCCGTCAAGCATGCAGATGACGGTTCAGGAGTCAAGTATGCAGAAGACAAGCGTGCA
GATGACGGATCAGAAATAGGTGCTGCCCTGATTGCTGCCTCGCAATCTCAGTAG

Peptide Sequence

PEP ID

Zm00001d039512_P013
PEP Infomation

pep chromosome:B73_RefGen_v4:3:6248782:6252242:1 gene:Zm00001d039512 transcript:Zm00001d039512_T013 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hexokinase1 description: hexokinase1
Sequence

MEKQGLDMHVAALINDAVGTLAGARYYDKDVVAGVIFGTGTNAAYVEKANAIPKWEGELP
HSGDMVINMEWGNFFSSHLPITEYDQELDKESLNPGEQIYEKLTSGMYLGEIVRRVLLKI
SLQSAIFGDIDHTKLQTHFLLRTPHISAMHHDETSDLKIVAENFEENLEITGTSLEARKL
VVEICDIVATRAARLAAAGLAGILMKIGRDHSVEDQRSVIAIDGGLFEHYTKFRRCLETT
LGELLGDEASKAVAIKHADDGSGIGAALIAASQSQYKNDLVAVKHADDGSGVKYAEDKRA
DDGSEIGAALIAASQSQ

Transcript Sequence

Transcript ID

Zm00001d039512_T013
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:6248782:6252242:1 gene:Zm00001d039512 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hexokinase1 description: hexokinase1
Sequence

GAAGGAACCAAACAGCGCAACACACGAACACACCAGGCGGCAGGCTCCACCCCGTCCTTT
TCCTGCCTTTTCCCCCCGTCGAGTTAATCCATCCAGTCGCCAAAAGCTTTGCTAAATTTC
ACGTGTCTCGCCTCGAGTCGTCCCTAATCCGACGATGCCTTGTTCTACTCCTAAAAAAAC
CCAAATATCCTGACTTTCTCTTGCTGCTAGCCTCCCTTTTCCCTTCTCCCTTAATCGCAC
TGTTGGAAGCTCTTCGCTGTCACCCCCACCCACCTCCGGCGCTCTTTTTTAGCATTTTCC
TTGGGCTCTGGACTCCAAAATCCCAGCCTTTTGTTTGCTTCTCTGTCTCCTGCTGATTGG
TGTCCCCGGGTCCAGGACTCTTGATTTGCTCCTCGCGGGGGTTCGGTCCCATGGCGGCAG
CTGCGCTGGCAATGGCAGAGCAGGTGGTGGCCGAGCTCCGAGTGAGGTGTGAGACGCCGC
CGTCGATGCTGCGCGAGGTGGCCGTGGAGATGGCCCGCGAGATGGGCGCGGGGCTGGAGA
AGGACGGCGGGAGCAGGGTCAAGATGCTCCTCTCCTACGTCGATAAGCTCCCCACAGGGA
GAGAGGAAGGATTATTCTATGGATTGGACCTAGGAGGAACGAATTTCCGCGTCTTGAAAG
TGCAACTAGGTGGGAATGCGAAGCATGTCGTTGACCGTGACTCCAGAGAAGTCGGCATTC
CGCCACATCTGATGTCAGGGAGCTCCTCGGAGCTTTTTGGTTTCATTGCTTCTGAATTGG
CCAAGTTTGTTGACGATGATGAGAAGTGCGCTAACATTTCGAATGGCAAGAAGCGAGAAA
TAGGGTTCACGTTTTCGTTCCCAGTGAAGCAGCGTTCTGTAGCTTCCGGTAGGCGAAGAT
GTGGTGGCTGAACTGCAAACAGCCATGGAGAAGCAAGGTCTGGACATGCATGTAGCTGCA
TTGATTAATGATGCTGTTGGGACGCTGGCGGGAGCAAGGTACTATGACAAAGATGTTGTC
GCTGGTGTAATATTTGGCACTGGCACAAACGCAGCATATGTTGAGAAGGCAAATGCTATT
CCAAAATGGGAGGGTGAGCTGCCCCATTCAGGAGACATGGTCATCAACATGGAATGGGGT
AACTTCTTCTCATCTCATCTCCCCATCACTGAATATGATCAAGAATTAGATAAGGAGAGC
TTAAATCCAGGAGAACAGATTTACGAGAAGTTAACGTCAGGAATGTATTTAGGTGAAATT
GTAAGGAGGGTGCTCCTTAAAATATCATTGCAGTCCGCCATTTTTGGTGATATTGACCAC
ACTAAGCTTCAAACCCATTTCCTTCTGCGGACTCCACATATTTCAGCAATGCACCATGAC
GAAACATCTGATCTGAAGATTGTGGCCGAAAATTTTGAAGAAAACCTAGAGATTACAGGC
ACATCCTTGGAGGCTCGTAAGCTGGTCGTTGAAATCTGTGACATTGTGGCGACAAGAGCA
GCCCGGCTGGCTGCTGCGGGGCTTGCAGGGATCCTCATGAAGATCGGGAGAGATCACAGC
GTCGAGGACCAACGGTCAGTCATCGCCATCGACGGAGGACTGTTCGAGCACTACACCAAA
TTCCGCCGGTGCTTGGAGACCACACTGGGTGAGCTGCTAGGAGACGAGGCGTCCAAGGCG
GTGGCCATCAAGCATGCCGACGACGGTTCAGGAATAGGTGCTGCCCTGATTGCAGCTTCA
CAGTCTCAGTACAAAAACGACTTAGTGGCCGTCAAGCATGCAGATGACGGTTCAGGAGTC
AAGTATGCAGAAGACAAGCGTGCAGATGACGGATCAGAAATAGGTGCTGCCCTGATTGCT
GCCTCGCAATCTCAGTAGAGAGATGTCCGAGTGGTATAGAGGTAGCAAGTAGCTATGATT
TGTTTCCAACGTCTTAACTGTCCAGCGTCTGCAGTTTAGCATGCTAGAGCTGGATGCGAT
CTGTAACCAAAACCAGGCTTGGCCAACTGGCTGTTCATAATTCCAATAACAGCAGGGTTG
CAGATGTCTCC