Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039498_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:6001214:6005318:1 gene:Zm00001d039498 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aurora b kinase1 description: aurora b kinase1
Sequence

ATGACAACGCTGGAAATATCTGTTTTTTCAATTTGTGCTTTAGTTAATCATCCTAGTGAG
CTGCTATGTCTTACAGTGCTATTTTTTGTGTGGAAACAGAGCAATCAAATTGTGGCTTTG
AAAGTTCTTTTCAAGAGCCAGCTTAAGCAATCACAGGTCGAGCATCAGCTGCGACGCGAA
GTGGAGATTCAGAGTCATCTTCGTCATCCTAATATTCTTCGCCTGTATGGGTACTTCTAT
GATCAGACCCGGGTTTACCTAATCCTGGAATATGCTGCCAAGGGTGAGCTGTATAAGGAA
CTGACAAGGTGTAAACATTTTTCTGAGAGACGTTCAGCAACTTATATTGCATCATTGGCT
AGAGCTCTGATCTACCTGCATGGGAAGCATGTTATCCATCGGGACATTAAACCAGAAAAT
CTTTTGGTTGGAGCCCAGGGCGAGATCAAAATCGCCGACTTTGGCTGGTCTGTGCATACC
TTCAACAGAAGAAGGACTATGTGCGGAACTCTGGATTACCTGCCACCTGAAATGGTGGAG
AAGACAGAACATGATTACCATGTTGACATATGGAGCCTGGGTATTCTGTGTTATGAGTTC
CTTTATGGGGTCCCACCTTTTGAAGCTAAGGAGCACTCAGAAACATACAGAAGGATAGTA
AAAGTCGACTTGAAGTTCCCACTGAAACCATTCGTTTCGCCCGCCGCAAAGGATTTGATT
TCCCAGATGCTGGTCAAGAACTCGGCCCAGCGGCTGCCTCTCCACAAGGTTCTTGAGCAC
CCATGGATCGTCCAGAACGCCGACCCTTCCGGTGTGTGCAGAGGATAG

Peptide Sequence

PEP ID

Zm00001d039498_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:6001214:6005318:1 gene:Zm00001d039498 transcript:Zm00001d039498_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aurora b kinase1 description: aurora b kinase1
Sequence

MTTLEISVFSICALVNHPSELLCLTVLFFVWKQSNQIVALKVLFKSQLKQSQVEHQLRRE
VEIQSHLRHPNILRLYGYFYDQTRVYLILEYAAKGELYKELTRCKHFSERRSATYIASLA
RALIYLHGKHVIHRDIKPENLLVGAQGEIKIADFGWSVHTFNRRRTMCGTLDYLPPEMVE
KTEHDYHVDIWSLGILCYEFLYGVPPFEAKEHSETYRRIVKVDLKFPLKPFVSPAAKDLI
SQMLVKNSAQRLPLHKVLEHPWIVQNADPSGVCRG

Transcript Sequence

Transcript ID

Zm00001d039498_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:6001214:6005318:1 gene:Zm00001d039498 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aurora b kinase1 description: aurora b kinase1
Sequence

ATATCGCCCCACAATTCCAAACTTCGCCTCGCCGCTCCCCCTCCCTACACAAGCTTCCTC
CCCCTCCGCGCCGCTCCTCCAGGCTCCAGCCATGGCGATCGCCACCGAGTCGCGCGGCTG
CGAGGACAGGGATTCAGCCCATGCAAACGAGGAGAAGCGGTGGGTGCTGTCTGATTTCGA
GGTTGGGAAGCCTCTTGGGAGGGGCAAATTCGGCCACGTATATCTTGCCAGAGAAAAGAG
GGTAAATAACATAGTTTACTTGCAATGATTATCAGTGTTATTAAAACTACGTTTAAACGT
CAAAACTCTAATTAGAGGTTGAAACCACGTTTTAGCGTTTTGGCGTTCTAACTGAAAAAC
ACAGTGTTTTATGCATTTTAGACCATTAGCTACTTTTGGGTCCAGTCTATTAGTTACTTT
TGAGGTTCAATCCAGCTCATGGGTGAAGTTTTGGTAAGCCACTAACCTCTCTATTTTGGT
ATTTAACTTCATATTTTTGTCTGAAATTATGATGTATTGGTATTTTTCCTGTGTTGTTTA
AAACTACGTTTAAACAAAGTTTAAACGTTTAAAAGTCAAAATTTGACCCATGAGCGTTCC
AACGTTTTACCGTTTTAATAACCTTGATGATTATTTTTTGTCTCTAACTTTACTGAATAA
TTTACTGTACGGTGATTGCTTGGAGTTGATTACTTCAGTCTTCAGTGTTGTGCAATGTAC
ATATCTACTAACTGAACTTTTTATGTTATGGTATACTCAGCAAATATACTACTGTAACTA
ATCTTGATTGTCAGGAAATATTGCACTTGCACCAAATATTTTTAGTCTCTAGCTTAGTTG
AATGGGTACTGTACCAAGATTGCTGGGATTTGACTCATTCAGTATTGTACCGTGCTTCCT
ATCTACTAACTGAACTTTTTTATTATTATTGTACAGCCAGCAACTATACTACTGTAAGTA
ATGCTATAGTCAGCAAATACACTGCTGTAACTAACAATCAACATGTTAAATGGCAATGCT
GGAAACGCCTTATAATGTTTTTCTGTTTATCCTTTAGTTAATCATCCTAGTTAGCAGTGC
AGTTTTGGCGATGTTTACCTGCCCAGAGAAAAGAGGGTAAATGTCATTTTAAGCTTTATT
TTGGTTAGTTGAACTGATTATTTTTAGTCTCTAACTTCACTGGATGATTTACTGTACTGT
GCTTACTGGGATTAGGCTGCTTCAGTACTGTACATTGTCTGTATCTACTAACTGAACTTT
TAAATTTTTAGTACTGTGCTTGCTGGGATTAGGCTGCTTCAGTACTGTACATTGTCTGTA
TCTACTAACTGAACTTTTAAAATTTTATATTATGGTGTACTCAGCAAATATACTACTGTA
ACTAATTTTATTTGTCAGGAATTATTGCATTGATTATTTTTAGTCTCTAGCTTAGCTGAA
TGGGTACTGTACCAAGGTTACTACGATTTGACTAATTCAGTATTATACCCTGTTTCATAT
CTGCTAATTGAACCTTTTTTGGTCAGCAACTATACTACTGTAACCAATAGTATACATGTT
GAATGACAACGCTGGAAATATCTGTTTTTTCAATTTGTGCTTTAGTTAATCATCCTAGTG
AGCTGCTATGTCTTACAGTGCTATTTTTTGTGTGGAAACAGAGCAATCAAATTGTGGCTT
TGAAAGTTCTTTTCAAGAGCCAGCTTAAGCAATCACAGGTCGAGCATCAGCTGCGACGCG
AAGTGGAGATTCAGAGTCATCTTCGTCATCCTAATATTCTTCGCCTGTATGGGTACTTCT
ATGATCAGACCCGGGTTTACCTAATCCTGGAATATGCTGCCAAGGGTGAGCTGTATAAGG
AACTGACAAGGTGTAAACATTTTTCTGAGAGACGTTCAGCAACTTATATTGCATCATTGG
CTAGAGCTCTGATCTACCTGCATGGGAAGCATGTTATCCATCGGGACATTAAACCAGAAA
ATCTTTTGGTTGGAGCCCAGGGCGAGATCAAAATCGCCGACTTTGGCTGGTCTGTGCATA
CCTTCAACAGAAGAAGGACTATGTGCGGAACTCTGGATTACCTGCCACCTGAAATGGTGG
AGAAGACAGAACATGATTACCATGTTGACATATGGAGCCTGGGTATTCTGTGTTATGAGT
TCCTTTATGGGGTCCCACCTTTTGAAGCTAAGGAGCACTCAGAAACATACAGAAGGATAG
TAAAAGTCGACTTGAAGTTCCCACTGAAACCATTCGTTTCGCCCGCCGCAAAGGATTTGA
TTTCCCAGATGCTGGTCAAGAACTCGGCCCAGCGGCTGCCTCTCCACAAGGTTCTTGAGC
ACCCATGGATCGTCCAGAACGCCGACCCTTCCGGTGTGTGCAGAGGATAGAACCACCACC
ACCGGCTGAAGGGAGTGCGATTCTTTCCACTCTCCCCATTTCGAGGGGAGTGCGATTCTT
TCGACTGTTTATGGCTTCTGTCGCCCGAATTGCCCCACCCCGAACTGTATCTTGTAGCAC
CGTGTACTGTGTGTAGTTGGGGCCGTGGGCAAATTGCCCTAAACCCTTGAACAACCTTCT
TTACTCGTAGTCTCGTATGAGAGAGCCTTGTAGAGTCTCGTCCGTCCAATTATGAACTCG
AGGGCAATGTGCAGGAAAATGTTGAAG