Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039475_T014
CDS Infomation	cds chromosome:B73_RefGen_v4:3:5284656:5291558:-1 gene:Zm00001d039475 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 22 description:Protein ALWAYS EARLY 3
Sequence	ATGGGCCCGGCAAAGGGTTCTCGAACAATTAACAAGACCATAGTAAAAGGATATGAAGAT CAACAGCAGCATGATGACCCATCTAGTTCAAGCAAAGCTAAACAGAAAAAGAGGAAAATT TCAGATTTAGATCCCAAATGGAGCAAGGATGAACTTACACGCTTTTATGAAGCCTACCGT CAACATGGGAAGGATTGGAAAAAGATCAGCATAGCGATAGGCGGTAAGTCGTCGGACATG GTGCGGTCTCTTTACAGTGCACATCGGACTTTCTTATCTCTTCCAGAACATCAAGCTACT GCCATGGGGTTTATCGCGCTGGTGACTGGTCATCACAATGCTTCGGAGAAAACCACGAGT CATAGAGGATATGATCACATAGCCAGAGCATCTGGAAAGGCAAGGAAACATGGAGAACAA CAGAAATCAATTGATGGACCTGACCTGCACAACTGTCATGAAGGGGAAATTACTGGATTT TCAGCTTCCTTCAAAAAACGATACTATGGCGAATTGGTCAGGAACAGCCGAAATCATGCT GTTCAGAGGCGTACTCCTCTTATACCAGTTATAGCTCCTGCAGACAGGAGTACCATTGAT GAGCCCACACCAGGAATTGAAAACGTCATCAATTTTAATTCTACCAAGAGAAAATATGAA GCGGCCAATCATGGCTGTGCTGTTGCTCCAACAAATAAGTACTCTTCGGACAGAGTTTCT GGATTCGCTGAAACATGCAAGGCTGATCAAGGCCATAGTTACTTGGATACCATGGAAATT GGGGACATAGCGATGTGTCAACAACATTTTAAGAAAACACGAATTCAGCAAACTGTGGAG GAAAGTCAGACTGGTATAGTTGAGCATGAGACAACGATGGCATCTAAAGAAGGGAATAAG CTAGTCTCTTCTGTAAACAACAATCAGATACTTATCGACAGTATTTCTGAAGATGATATG TTGGTCTTGGATGTATTGAATAGCCTGGTGAATGCACCCTCTAAAATGTCAGAACTAGAG ATTAATATTCCTTCAGGTTCGCTTGGAAAAACTGACTCTGTGTTAAGGGAGGAAGGCCAC CCTACCATTGATCTGTCTAAACAAGGGAAGCCAGTTCGTAAATCCAGTGCTTCCAAGACT AGGAAGAAAAAACATAAGAAGATATTAGGTGCAGAGGTGCCTGCTGAAGCACAAAAAAAA TGTGACGATAATTTAGTCCTGCCGGAAACACTGAGGGTTGGTATCACTGATGATTCTTCC TTGTGTACTGACTCTGGAAGAGCGAGGACACCGGAAGCATCTGAAGATATTTCTGCTGAA GTCCCCAATACACAAACAGAAGCCAAGCCTGAATTTATAATGTCTGGAAGGACCAGGTTG AAATCTCAGATGCATTGCAAAACAAAGCCTATGTCGTGCAATGAAGGTTCAGATAATTTT CAGGCAAAGAAGTTGCTGCACTGTTTGTCATCTGAACCACTTCGTAGATGGTGCACATAT GAGTGGTTCTACAGTGCAGTTGATTATCCATGGTTTTCAAATAATGAGTTTGTGCACTAC TTAGATCATGCAAAATTGAGTCATCTTTCAAGGTTGACTAGATCAGAATGGAGCGCGATT CGAAGCTCCCTTGGTAAACCGCGGCGATTTTCAAATCATTTTCTGGCAGTGGAAAAAGAA AAACTTGAGGATTATCGGGAGAAAGTTAGAAAAATCTACGCTCAACTCAATGATGGTTCA CGGGATTCTCTACCTGCAGACCTAGCTAGGCCATTTTCAATTGGTCAGCAGGTTATTGTT CGTCATCCAAGTTCTAGGGAACTTTGTGATGGCAAAGTGGTGATGATGGGGCCGGATTGT TACAAGGTCCATTTTGATGATCCTGACCTTGGTGTTGATACTGTGAAGGACACTGATTGT ATGCCAGTTAATTGGCTGCATAATCGTCCTGACAACATGAGAAGGAACTACCTTTCAAAT GATGTGTACAACATACTGGAGATGGATCACATTCCTGACCTTACACCAAGTGAGAACCGG AATCATGCTATAAATGGAACTACTGTATTCGAGGAGCTCAAAAGTCTGCGCTTAACATCA GATAGACAGCCTAAGGCAGAATCTATTATACATAGTGAACGGCCACCATATAGGAGTACA TCTGATGGCCCTACAAGTTCTAGTGGTTTCTCTTGCCCAGACAATAATGCTGGTCACAAC GGTGAACTAGAGTCATATGTAGCTGCATTTTTTGAAAACTCACTATCACAAGCCAGGCAG ATGGTTGACGAAGCCATCCAGGCAAACTCTGGTGGTAGTGATGATGAAAAGGTATGCATG TTAAATCAAGTGACAGGATGTCTAGGCTCAGATTCTCGTGGCGTGCAACTTCCATCTGAC CTGATATCAAACTGCATCGCAACGGTTATTTCAATCAAGCGCCTTAGCGACTCGCGACAT CCATTTGGTAACGTAGCAGGCGTCTTGGAGCATGCTTTATCAATGCTGCGTCCAAGC

Peptide Sequence

PEP ID	Zm00001d039475_P014
PEP Infomation	pep chromosome:B73_RefGen_v4:3:5284656:5291558:-1 gene:Zm00001d039475 transcript:Zm00001d039475_T014 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 22 description:Protein ALWAYS EARLY 3
Sequence	MGPAKGSRTINKTIVKGYEDQQQHDDPSSSSKAKQKKRKISDLDPKWSKDELTRFYEAYR QHGKDWKKISIAIGGKSSDMVRSLYSAHRTFLSLPEHQATAMGFIALVTGHHNASEKTTS HRGYDHIARASGKARKHGEQQKSIDGPDLHNCHEGEITGFSASFKKRYYGELVRNSRNHA VQRRTPLIPVIAPADRSTIDEPTPGIENVINFNSTKRKYEAANHGCAVAPTNKYSSDRVS GFAETCKADQGHSYLDTMEIGDIAMCQQHFKKTRIQQTVEESQTGIVEHETTMASKEGNK LVSSVNNNQILIDSISEDDMLVLDVLNSLVNAPSKMSELEINIPSGSLGKTDSVLREEGH PTIDLSKQGKPVRKSSASKTRKKKHKKILGAEVPAEAQKKCDDNLVLPETLRVGITDDSS LCTDSGRARTPEASEDISAEVPNTQTEAKPEFIMSGRTRLKSQMHCKTKPMSCNEGSDNF QAKKLLHCLSSEPLRRWCTYEWFYSAVDYPWFSNNEFVHYLDHAKLSHLSRLTRSEWSAI RSSLGKPRRFSNHFLAVEKEKLEDYREKVRKIYAQLNDGSRDSLPADLARPFSIGQQVIV RHPSSRELCDGKVVMMGPDCYKVHFDDPDLGVDTVKDTDCMPVNWLHNRPDNMRRNYLSN DVYNILEMDHIPDLTPSENRNHAINGTTVFEELKSLRLTSDRQPKAESIIHSERPPYRST SDGPTSSSGFSCPDNNAGHNGELESYVAAFFENSLSQARQMVDEAIQANSGGSDDEKVCM LNQVTGCLGSDSRGVQLPSDLISNCIATVISIKRLSDSRHPFGNVAGVLEHALSMLRPS

Transcript Sequence

Transcript ID	Zm00001d039475_T014
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:5284656:5291558:-1 gene:Zm00001d039475 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MYB-related-transcription factor 22 description:Protein ALWAYS EARLY 3
Sequence	AGTGCAGCAGAAACGCAAACCGGCCACCCCGCCCGCACTCGCCGCCCCATCTCTTCCGCT CCCGTCCTCTCCGATCCATCCACGACGCGGGAACCAGCCTCCGAACAGCAGCTTCCCGCC GCCGGCCCCCAAGCCTCTGCGGGCGTGGTTGCGTCTCCGCGGTGGCGCCACCGGAGCGGC TCTTGCGTCCGAGAGGCGCCCTCGTGCGCGCGATTTTGGCCAGATCCGACCAGCAATATT TGTCGATTCTGAACAAGCACCGTTTGATGGGCCCGGCAAAGGGTTCTCGAACAATTAACA AGACCATAGTAAAAGGATATGAAGATCAACAGCAGCATGATGACCCATCTAGTTCAAGCA AAGCTAAACAGAAAAAGAGGAAAATTTCAGATTTAGATCCCAAATGGAGCAAGGATGAAC TTACACGCTTTTATGAAGCCTACCGTCAACATGGGAAGGATTGGAAAAAGATCAGCATAG CGATAGGCGGTAAGTCGTCGGACATGGTGCGGTCTCTTTACAGTGCACATCGGACTTTCT TATCTCTTCCAGAACATCAAGCTACTGCCATGGGGTTTATCGCGCTGGTGACTGGTCATC ACAATGCTTCGGAGAAAACCACGAGTCATAGAGGATATGATCACATAGCCAGAGCATCTG GAAAGGCAAGGAAACATGGAGAACAACAGAAATCAATTGATGGACCTGACCTGCACAACT GTCATGAAGGGGAAATTACTGGATTTTCAGCTTCCTTCAAAAAACGATACTATGGCGAAT TGGTCAGGAACAGCCGAAATCATGCTGTTCAGAGGCGTACTCCTCTTATACCAGTTATAG CTCCTGCAGACAGGAGTACCATTGATGAGCCCACACCAGGAATTGAAAACGTCATCAATT TTAATTCTACCAAGAGAAAATATGAAGCGGCCAATCATGGCTGTGCTGTTGCTCCAACAA ATAAGTACTCTTCGGACAGAGTTTCTGGATTCGCTGAAACATGCAAGGCTGATCAAGGCC ATAGTTACTTGGATACCATGGAAATTGGGGACATAGCGATGTGTCAACAACATTTTAAGA AAACACGAATTCAGCAAACTGTGGAGGAAAGTCAGACTGGTATAGTTGAGCATGAGACAA CGATGGCATCTAAAGAAGGGAATAAGCTAGTCTCTTCTGTAAACAACAATCAGATACTTA TCGACAGTATTTCTGAAGATGATATGTTGGTCTTGGATGTATTGAATAGCCTGGTGAATG CACCCTCTAAAATGTCAGAACTAGAGATTAATATTCCTTCAGGTTCGCTTGGAAAAACTG ACTCTGTGTTAAGGGAGGAAGGCCACCCTACCATTGATCTGTCTAAACAAGGGAAGCCAG TTCGTAAATCCAGTGCTTCCAAGACTAGGAAGAAAAAACATAAGAAGATATTAGGTGCAG AGGTGCCTGCTGAAGCACAAAAAAAATGTGACGATAATTTAGTCCTGCCGGAAACACTGA GGGTTGGTATCACTGATGATTCTTCCTTGTGTACTGACTCTGGAAGAGCGAGGACACCGG AAGCATCTGAAGATATTTCTGCTGAAGTCCCCAATACACAAACAGAAGCCAAGCCTGAAT TTATAATGTCTGGAAGGACCAGGTTGAAATCTCAGATGCATTGCAAAACAAAGCCTATGT CGTGCAATGAAGGTTCAGATAATTTTCAGGCAAAGAAGTTGCTGCACTGTTTGTCATCTG AACCACTTCGTAGATGGTGCACATATGAGTGGTTCTACAGTGCAGTTGATTATCCATGGT TTTCAAATAATGAGTTTGTGCACTACTTAGATCATGCAAAATTGAGTCATCTTTCAAGGT TGACTAGATCAGAATGGAGCGCGATTCGAAGCTCCCTTGGTAAACCGCGGCGATTTTCAA ATCATTTTCTGGCAGTGGAAAAAGAAAAACTTGAGGATTATCGGGAGAAAGTTAGAAAAA TCTACGCTCAACTCAATGATGGTTCACGGGATTCTCTACCTGCAGACCTAGCTAGGCCAT TTTCAATTGGTCAGCAGGTTATTGTTCGTCATCCAAGTTCTAGGGAACTTTGTGATGGCA AAGTGGTGATGATGGGGCCGGATTGTTACAAGGTCCATTTTGATGATCCTGACCTTGGTG TTGATACTGTGAAGGACACTGATTGTATGCCAGTTAATTGGCTGCATAATCGTCCTGACA ACATGAGAAGGAACTACCTTTCAAATGATGTGTACAACATACTGGAGATGGATCACATTC CTGACCTTACACCAAGTGAGAACCGGAATCATGCTATAAATGGAACTACTGTATTCGAGG AGCTCAAAAGTCTGCGCTTAACATCAGATAGACAGCCTAAGGCAGAATCTATTATACATA GTGAACGGCCACCATATAGGAGTACATCTGATGGCCCTACAAGTTCTAGTGGTTTCTCTT GCCCAGACAATAATGCTGGTCACAACGGTGAACTAGAGTCATATGTAGCTGCATTTTTTG AAAACTCACTATCACAAGCCAGGCAGATGGTTGACGAAGCCATCCAGGCAAACTCTGGTG GTAGTGATGATGAAAAGGTATGCATGTTAAATCAAGTGACAGGATGTCTAGGCTCAGATT CTCGTGGCGTGCAACTTCCATCTGACCTGATATCAAACTGCATCGCAACGGTTATTTCAA TCAAGCGCCTTAGCGACTCGCGACATCCATTTGGTAACGTAGCAGGCGTCTTGGAGCATG CTTTATCAATGCTGCGTCCAAGC