Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039469_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:5145889:5150710:1 gene:Zm00001d039469 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulatory protein NPR1
Sequence	ATGGAGCCCATGGACAGCCAGCTCACGGCTCTCGCGCTCTCCGACTCCGACAGCGCCTCC GTCGAGGGCGCCGCAGCTGACGCGGCGGACGCCGACCTGCAGGCGCTCCGCCGCCTCTCC GACAACCTCGCGGCGGCGTTCCGCTCCCCAGACGACTTCGCCTTCCTCGCCGACGCGCGC ATCGTGGTTCCCGGCGCGCCCGACCTCCGCGTGCACCGCTGCGTGCTCTGCGCGCGCAGC CCCTTCCTGCGCGACGCCTTTGCGCGCCGCGCCGCCAGCGCCGGCGAGGAGGAGAAGGAC AAGGACAGTTACATGTGCAAGGTGGAGCTCCGGGATCTCCTCGGAGACGAGGTCGAGGTC GGGTACGACGCGCTGCGGCTGGTGCTCGACTACCTCTACAGCGGCCGCGTCGCCGCCCTG CCCAAGGCGGCCTGCCTCTGCGTCGACGAGGACGCCTGCGCGCACGTCGGCTGCCGCCCC GCCGTCGCCTTCATGGCGCAGGTCCTCTTCGCCGCGTCCACCTTCGACGTCGCCGAGCTC ACCAATCTCTTCCAGCGGCGGCTCCTTGATGTCCTTGATAAGGTTGAAGTGGACAACCTC CCATTGGTCTTATCTGTTGCCAACTTATGTAGCAAATCTTGTGTGAAACTGCTTGAGAGG TGCCTTGATGTAGTAGTTCGTTCAAATCTTGATATGATTGCTCTTGAAAAAAAGTTGCCT CCAGATGTTGTCAAAGAAATTGTTGATGCAAGGGTAAGCCTTGGATTAGTTTCACCGGAA GACAAGGGCTTCCCTAACATACATGTAAGAAGAATACACAGAGCACTGGATTCTGATGAC GTGGAGCTAGTCCGGATGCTACTCAAGGAAGGAAAAACTAATCTTGATGATGCATATGCA TTACACTATGCCGTCGAACATTGCGACTCAAAGATCACAACAGAACTTCTGGATCTCGCG CTTGCAGATGTCAATCATAGGAACCCAAGAGGTTATACGGTCCTTCACATTGCTGCTATG AGAAGGGAACCTAAAATCATTGTCTCTCTTTTGACCAAGGGAGCTCGGCCATCAGACCTC ACATTTGATGACAGAAAAGCAGTGCAGATCTCTAAACGACTTACAAAGCATGGGGATTAC TTTGGGCCTACTGAGGACGGAAAGCCTTCTCCTAAAGATAGATTATGTATTGAGGTACTA GAGCAAGCTGAAAGAAGGGACCCGCAACTTGGAGAAGCATCAGTTTCTCTTGCGATAGAA GGAGACTCTGCGCGTGGGAGGCTACTCTACCTTGAAAACCGAGTTGCTCTAGCAAGAATA CTGTTTCCTATGGAGGCAAGGGTAGCAATGGACATTGCTCAAGTCGATGGAACACTGGAA TTCACCCTTGTTTCTAGTGTGAATCTGCCTGCCGAGATACAACGGACAGTTGACCTGAAC GATACTCCTTTCACAATGAAGGAAGAACACCTGGCTCGGATGAGAGCCCTATCCAAGACA GTGGAAGTCGGGAAGCGTTTCTTCCCGCGGTGTTCGAAGGTACTTGACACGATCATGGAC GACGAAGCCGAGATGGCTTCCCTCGGGCGAGACACATCCGCGGAGAAGAAGAGGAGGTTC CATGACCTGCAAGACCTGGTCCAGAAGGCATTCAGCGAGGACAAGGAGGAGAACGACAGG TCCGCGGCGCGGTCACCTTCCTCCTCGTCGACGACGACGACGTCGATCGGGGCCGTCCGG CCTCGGAGGTGA

Peptide Sequence

PEP ID	Zm00001d039469_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:5145889:5150710:1 gene:Zm00001d039469 transcript:Zm00001d039469_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulatory protein NPR1
Sequence	MEPMDSQLTALALSDSDSASVEGAAADAADADLQALRRLSDNLAAAFRSPDDFAFLADAR IVVPGAPDLRVHRCVLCARSPFLRDAFARRAASAGEEEKDKDSYMCKVELRDLLGDEVEV GYDALRLVLDYLYSGRVAALPKAACLCVDEDACAHVGCRPAVAFMAQVLFAASTFDVAEL TNLFQRRLLDVLDKVEVDNLPLVLSVANLCSKSCVKLLERCLDVVVRSNLDMIALEKKLP PDVVKEIVDARVSLGLVSPEDKGFPNIHVRRIHRALDSDDVELVRMLLKEGKTNLDDAYA LHYAVEHCDSKITTELLDLALADVNHRNPRGYTVLHIAAMRREPKIIVSLLTKGARPSDL TFDDRKAVQISKRLTKHGDYFGPTEDGKPSPKDRLCIEVLEQAERRDPQLGEASVSLAIE GDSARGRLLYLENRVALARILFPMEARVAMDIAQVDGTLEFTLVSSVNLPAEIQRTVDLN DTPFTMKEEHLARMRALSKTVEVGKRFFPRCSKVLDTIMDDEAEMASLGRDTSAEKKRRF HDLQDLVQKAFSEDKEENDRSAARSPSSSSTTTTSIGAVRPRR

Transcript Sequence

Transcript ID	Zm00001d039469_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:5145889:5150710:1 gene:Zm00001d039469 gene_biotype:protein_coding transcript_biotype:protein_coding description:Regulatory protein NPR1
Sequence	CTCCTTTCTGGCTCGCTAGCCTCGCTCCGCTTCGCTTCGACTTGGACTTCGTCGCGCCTT CCCCGCCATCTCCGGCGACCGGCGCCACAGCCAATGGAGCCCATGGACAGCCAGCTCACG GCTCTCGCGCTCTCCGACTCCGACAGCGCCTCCGTCGAGGGCGCCGCAGCTGACGCGGCG GACGCCGACCTGCAGGCGCTCCGCCGCCTCTCCGACAACCTCGCGGCGGCGTTCCGCTCC CCAGACGACTTCGCCTTCCTCGCCGACGCGCGCATCGTGGTTCCCGGCGCGCCCGACCTC CGCGTGCACCGCTGCGTGCTCTGCGCGCGCAGCCCCTTCCTGCGCGACGCCTTTGCGCGC CGCGCCGCCAGCGCCGGCGAGGAGGAGAAGGACAAGGACAGTTACATGTGCAAGGTGGAG CTCCGGGATCTCCTCGGAGACGAGGTCGAGGTCGGGTACGACGCGCTGCGGCTGGTGCTC GACTACCTCTACAGCGGCCGCGTCGCCGCCCTGCCCAAGGCGGCCTGCCTCTGCGTCGAC GAGGACGCCTGCGCGCACGTCGGCTGCCGCCCCGCCGTCGCCTTCATGGCGCAGGTCCTC TTCGCCGCGTCCACCTTCGACGTCGCCGAGCTCACCAATCTCTTCCAGCGGCGGCTCCTT GATGTCCTTGATAAGGTTGAAGTGGACAACCTCCCATTGGTCTTATCTGTTGCCAACTTA TGTAGCAAATCTTGTGTGAAACTGCTTGAGAGGTGCCTTGATGTAGTAGTTCGTTCAAAT CTTGATATGATTGCTCTTGAAAAAAAGTTGCCTCCAGATGTTGTCAAAGAAATTGTTGAT GCAAGGGTAAGCCTTGGATTAGTTTCACCGGAAGACAAGGGCTTCCCTAACATACATGTA AGAAGAATACACAGAGCACTGGATTCTGATGACGTGGAGCTAGTCCGGATGCTACTCAAG GAAGGAAAAACTAATCTTGATGATGCATATGCATTACACTATGCCGTCGAACATTGCGAC TCAAAGATCACAACAGAACTTCTGGATCTCGCGCTTGCAGATGTCAATCATAGGAACCCA AGAGGTTATACGGTCCTTCACATTGCTGCTATGAGAAGGGAACCTAAAATCATTGTCTCT CTTTTGACCAAGGGAGCTCGGCCATCAGACCTCACATTTGATGACAGAAAAGCAGTGCAG ATCTCTAAACGACTTACAAAGCATGGGGATTACTTTGGGCCTACTGAGGACGGAAAGCCT TCTCCTAAAGATAGATTATGTATTGAGGTACTAGAGCAAGCTGAAAGAAGGGACCCGCAA CTTGGAGAAGCATCAGTTTCTCTTGCGATAGAAGGAGACTCTGCGCGTGGGAGGCTACTC TACCTTGAAAACCGAGTTGCTCTAGCAAGAATACTGTTTCCTATGGAGGCAAGGGTAGCA ATGGACATTGCTCAAGTCGATGGAACACTGGAATTCACCCTTGTTTCTAGTGTGAATCTG CCTGCCGAGATACAACGGACAGTTGACCTGAACGATACTCCTTTCACAATGAAGGAAGAA CACCTGGCTCGGATGAGAGCCCTATCCAAGACAGTGGAAGTCGGGAAGCGTTTCTTCCCG CGGTGTTCGAAGGTACTTGACACGATCATGGACGACGAAGCCGAGATGGCTTCCCTCGGG CGAGACACATCCGCGGAGAAGAAGAGGAGGTTCCATGACCTGCAAGACCTGGTCCAGAAG GCATTCAGCGAGGACAAGGAGGAGAACGACAGGTCCGCGGCGCGGTCACCTTCCTCCTCG TCGACGACGACGACGTCGATCGGGGCCGTCCGGCCTCGGAGGTGAAAGGGAAAACATGCA TGGGTTCTGTTTCCGTCCCGCCATTTTGGTAGCCGATGCGGTGGCCACATAGAGACCGTA ATCATGCTCACTTTTGCTGGCGTATAGCATTAATGCAGAACACGTATACTAACTAACTAT ATAATATACGAGTAGGTGTAGATCGGTACTGGAGGTTGTAATGGCAGTAGCGAAACATAG TGCATTCTGGCGGGCGTGTGTGTCGAGCAGGTAGCTGGCTGCTCTTGATTGTAATGGCGT TTTGAGCAGCTAACTAGGATCCCTCTTCACTTCACTCGAAAAGGGTCTGGCATGGCTTGT GGAATTGTGGTGTGCTGGATAGTGTCAGGTTCAGTGTCGCAAACCCTGAAGAAATGCAAA CATGTAGTGCTGCACTATCTACCAAGAGCCAAGGGGAAGTGTTTGTCAGCCGTTGGTGTA TGAATGGATGGCACACCTTAATTTCACTTTTCTACTACGCTAATAGCTAATGACTGAGAC TGTAATTTTGACACCTGTAATTACTACCGGAAGTAGCGATTCGGTGCGCCGGATTATAGG AAGAAAAAAGAAGAAGGAAAATTCACATCCTTAAACTTGC