Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039460_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:3:4951143:4953613:1 gene:Zm00001d039460 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor SUI1 family protein
Sequence

GAAGAAAGCGGCGATGGCAGCGGAGAAGCCGGCTCCGGTGCGCGTGCTGTACTGCGGCGT
CTGCGGCCTCCCGGCCGAGTACTGCGAGTTCGGCCCCGACTTCCAGCGCTGCAAGCCCTG
GCTGCGGGCGCACGCGCCCGGCGTCTACCCCGACGACCTCGTCGCCGGTCCCTCCTCGTC
CGCGACAGGGACGTCGACAAGGTCGGGGAGCGCCTCCAGGGCGTCGGGATCTCCGACGGC
TCCAGCAGCGCCGCAGGGGATGCTTCCGCGTCTAAGCCCGAAGAGGTCAAACGCCTGCCT
GGTGGTAAGCTCAAGAAAAAGGAAAAGCAAGAGGTTGTCATCGAGAAGATTGTCCGCAAC
AAGCGCAAATGTGTTACTGTGGTGAAGGGACTTGAATTGTTTGGTGTAAAGCTGAGTGAT
GCTTCAAAGAAGCTTGGGAAGAAGTTTGCAACCGGAGCTTCTGTTGTTAAGGGCCCGACC
GAGAAGGAACAGATTGACGTGCAAGGGGACATATCATATGATATTGTGGAGTTCATTACA
GATACATGGCCTGATGTACCTGAGTCGGCCATTTTCTTCATTGAAGATGGAAGGAAGGTT
CCTGCCGCTTGA

Peptide Sequence

PEP ID

Zm00001d039460_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:3:4951143:4953613:1 gene:Zm00001d039460 transcript:Zm00001d039460_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor SUI1 family protein
Sequence

EESGDGSGEAGSGARAVLRRLRPPGRVLRVRPRLPALQALAAGARARRLPRRPRRRSLLV
RDRDVDKVGERLQGVGISDGSSSAAGDASASKPEEVKRLPGGKLKKKEKQEVVIEKIVRN
KRKCVTVVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFIT
DTWPDVPESAIFFIEDGRKVPAA

Transcript Sequence

Transcript ID

Zm00001d039460_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:4951143:4953613:1 gene:Zm00001d039460 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor SUI1 family protein
Sequence

GAAGAAAGCGGCGATGGCAGCGGAGAAGCCGGCTCCGGTGCGCGTGCTGTACTGCGGCGT
CTGCGGCCTCCCGGCCGAGTACTGCGAGTTCGGCCCCGACTTCCAGCGCTGCAAGCCCTG
GCTGCGGGCGCACGCGCCCGGCGTCTACCCCGACGACCTCGTCGCCGGTCCCTCCTCGTC
CGCGACAGGGACGTCGACAAGGTCGGGGAGCGCCTCCAGGGCGTCGGGATCTCCGACGGC
TCCAGCAGCGCCGCAGGGGATGCTTCCGCGTCTAAGCCCGAAGAGGTCAAACGCCTGCCT
GGTGGTAAGCTCAAGAAAAAGGAAAAGCAAGAGGTTGTCATCGAGAAGATTGTCCGCAAC
AAGCGCAAATGTGTTACTGTGGTGAAGGGACTTGAATTGTTTGGTGTAAAGCTGAGTGAT
GCTTCAAAGAAGCTTGGGAAGAAGTTTGCAACCGGAGCTTCTGTTGTTAAGGGCCCGACC
GAGAAGGAACAGATTGACGTGCAAGGGGACATATCATATGATATTGTGGAGTTCATTACA
GATACATGGCCTGATGTACCTGAGTCGGCCATTTTCTTCATTGAAGATGGAAGGAAGGTT
CCTGCCGCTTGATGTCACTATGAGGCGCAGGACCAATGGATTTACAATTATAACACAGAG
ATAAAGCAAAGGCGTGGCTGTCAAGGCATGTAGCGGCCATACCAGTTCGTCTCTTTGTCC
GAAGTCATGGACTGTTCTTCCAAGTTTTATCAGGAGTGGCGTTTTGTTTACCACCGTCAC
CTGCTTCCATGTATGAGATCAAATCTATACAGTTACCAGTTTGTTATATGTGTGATGTCT
GTTGT