Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039456_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:4838566:4841548:-1 gene:Zm00001d039456 gene_biotype:protein_coding transcript_biotype:protein_coding description:RAP
Sequence

ATGGAAGCTGCAATCCCCCTCGGGCTCGCCCTTCCCCGAAGCAGCACCGGCATCTGCAGC
TTATCGGTACTGCTCAAGTCCTCAACCAAGCCCAACCTCAGCTGCTTCGGCTGGGTCACC
GGAAAGCGCGGGCCTATCCCGTCCCGCGCCGTCTCCGAGGACCGCACCGACTCCACGCCG
CAGTGGCAACTTGACTTTCTTGGGGCGAGCGCGGTGGCCCCCGATTCGCCTGTGGAGGAG
GAAGAGGAGGACCTTCTCCCAGCCGAGGCCACTGACTGGTGCGTCCGCGCACGCCGCTCT
GCCCTGCGCTCCATCGAGGAGCGTGGCCTCGCGCCCGCTCTGCAGCGGATGGTGTCACCG
CCCAAGAAGACGAAAAAGAAGAAGACTGCCAAGAAGAAAGAGCTCAAGAAGGCGGCCGCC
GAGCTCAAGCGCCGCACTAAGCAGTTGGCTGATGCCGAGGGAGACGAAGACGACGACGAT
GACTATGACGTCGTTGATGATTTGCAGAACATGGACGACCTGGAGCTGCGGGTCGCGCAG
TTCGCCGACGGCATGTTCGACGAAAAGCGCCAGAGAAACAGGGAGACCTTCGTCCAGACC
TTGTCCAGGTTCTCGGCCGCGCCTTCCAACCGGAGCAAAGAGGTGTCCTTGAACCGCTCC
ATCGTCCAGGCGCAAACTGCCAACGAGGTGCTGGACCTCACGGCAGAGGTGATCACTGCT
GTCGCAAAGGGTCTCAGCCCCTCGCCACTCACGCCGCTTAACATCGCCACTGCGCTCCAC
CGCATAGCCAGGAACATGGAAGCGGTGTCCATGATGCAGACGCACCGGCTTGCCTTTGCA
CGCCAGAGGGACATGTCCATGCTCGTGGGTCTGGCCATGGTGGCCCTGCCAGAGTGCTCG
CCACAGGGTGTCTCCAACATCGCCTGGGCTTTGTCCAAGATTGGCGGTGATCTGCTATAC
CTGCCAGAGATGGATAGGATAGCTGATGTGGCCATGGCCAAGGTTCAAGACTTCAATGCA
CAGAACGTTGCCAATGTTGCAGGAGCATTCGCTTCCATGCGCCAATCAGCACCGGGGCTT
TTTTCATCTCTGGCCATGAGAGCAGCACAACTGCTGCAAACATTCAAGGAGCAAGAGCTT
GCTCAATTCTTATGGGGTTGTGCTTCTCTGAACGAGTGCCCACATCCCTTGCTTGATGCA
CTAGATACTGCTTTTCAAAATGATACCAGTTTTCAATGCCATGTAACTGATATAAAATCA
AGCGCGCATTGGAGCTCAGCAGAAGAACTTTCTGGTGGAGAAGATGGTAGTACGAGCAGT
GCCCGTACTCTGAACTTCAACCGAGATCAGGTTGGGAATATTGCTTGGTCCTATGCTGTT
ATTGGGCAAATGGACCGTCCATTCTTTTCACATATGTGGAGAACTCTAAGTCGCTTCGAA
GAGCAACGGGTTTCGGATCAGTATAGAGAAGACATGATGTTTGCTTCACAAGTATATCTT
GCAAACCAGTCTTTGAAGCTTGAATACCGGAATCTTGGACTGTGCTTAAGAAGTGATCTT
GAGGAGAAAATAGCAAAAGCTGGAAAGAGCAAAAGGTTCAACCAGAAGACAACTTCTTCA
TTTCAAAAGGAGGTTGGTCGTCTCCTCTATAGTACCGGGCATGAGTGGGTTAGAGAATAT
GCCATCGATGGTTACACTGTTGATGCCGTGTTAGTTGATGAGAAGCTTGCATTTGAGATA
GATGGGCCAACACACTTCTCTAGGAATTTAGGTACACCATTAGGCCACACAGCATTTAAA
CGACGCTACATTACTGCTTCTGGGTGGAAGTTAGTTTCGTTGTCTCTTCAAGAGTGGGAG
AACCTACAAGGTGAGTTTGAACAATTGGAATATTTGAGGAGAATATTAGACATAGAGGCT
GAATAA

Peptide Sequence

PEP ID

Zm00001d039456_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:4838566:4841548:-1 gene:Zm00001d039456 transcript:Zm00001d039456_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RAP
Sequence

MEAAIPLGLALPRSSTGICSLSVLLKSSTKPNLSCFGWVTGKRGPIPSRAVSEDRTDSTP
QWQLDFLGASAVAPDSPVEEEEEDLLPAEATDWCVRARRSALRSIEERGLAPALQRMVSP
PKKTKKKKTAKKKELKKAAAELKRRTKQLADAEGDEDDDDDYDVVDDLQNMDDLELRVAQ
FADGMFDEKRQRNRETFVQTLSRFSAAPSNRSKEVSLNRSIVQAQTANEVLDLTAEVITA
VAKGLSPSPLTPLNIATALHRIARNMEAVSMMQTHRLAFARQRDMSMLVGLAMVALPECS
PQGVSNIAWALSKIGGDLLYLPEMDRIADVAMAKVQDFNAQNVANVAGAFASMRQSAPGL
FSSLAMRAAQLLQTFKEQELAQFLWGCASLNECPHPLLDALDTAFQNDTSFQCHVTDIKS
SAHWSSAEELSGGEDGSTSSARTLNFNRDQVGNIAWSYAVIGQMDRPFFSHMWRTLSRFE
EQRVSDQYREDMMFASQVYLANQSLKLEYRNLGLCLRSDLEEKIAKAGKSKRFNQKTTSS
FQKEVGRLLYSTGHEWVREYAIDGYTVDAVLVDEKLAFEIDGPTHFSRNLGTPLGHTAFK
RRYITASGWKLVSLSLQEWENLQGEFEQLEYLRRILDIEAE

Transcript Sequence

Transcript ID

Zm00001d039456_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:4838566:4841548:-1 gene:Zm00001d039456 gene_biotype:protein_coding transcript_biotype:protein_coding description:RAP
Sequence

GCGCGAATTCCGCCGGACCCTTCCAAAACTCCCCAACATCCGTGCGCTCCGACGAGGCTC
CGGCGGCCGCATCGTCCCGCCCCGCGGCCCGCGGCCCGCGCGGTGGCAACGGAGACCACG
TGTGAGTCTGCGACGGCGAGGAGCTTATCCTGTGCAGCGCGACGAGCACGCTCGGAAGCG
GCGCATTTCCCGATCGCAGCCGACGCTGAGCAGGAATGGAAGCTGCAATCCCCCTCGGGC
TCGCCCTTCCCCGAAGCAGCACCGGCATCTGCAGCTTATCGGTACTGCTCAAGTCCTCAA
CCAAGCCCAACCTCAGCTGCTTCGGCTGGGTCACCGGAAAGCGCGGGCCTATCCCGTCCC
GCGCCGTCTCCGAGGACCGCACCGACTCCACGCCGCAGTGGCAACTTGACTTTCTTGGGG
CGAGCGCGGTGGCCCCCGATTCGCCTGTGGAGGAGGAAGAGGAGGACCTTCTCCCAGCCG
AGGCCACTGACTGGTGCGTCCGCGCACGCCGCTCTGCCCTGCGCTCCATCGAGGAGCGTG
GCCTCGCGCCCGCTCTGCAGCGGATGGTGTCACCGCCCAAGAAGACGAAAAAGAAGAAGA
CTGCCAAGAAGAAAGAGCTCAAGAAGGCGGCCGCCGAGCTCAAGCGCCGCACTAAGCAGT
TGGCTGATGCCGAGGGAGACGAAGACGACGACGATGACTATGACGTCGTTGATGATTTGC
AGAACATGGACGACCTGGAGCTGCGGGTCGCGCAGTTCGCCGACGGCATGTTCGACGAAA
AGCGCCAGAGAAACAGGGAGACCTTCGTCCAGACCTTGTCCAGGTTCTCGGCCGCGCCTT
CCAACCGGAGCAAAGAGGTGTCCTTGAACCGCTCCATCGTCCAGGCGCAAACTGCCAACG
AGGTGCTGGACCTCACGGCAGAGGTGATCACTGCTGTCGCAAAGGGTCTCAGCCCCTCGC
CACTCACGCCGCTTAACATCGCCACTGCGCTCCACCGCATAGCCAGGAACATGGAAGCGG
TGTCCATGATGCAGACGCACCGGCTTGCCTTTGCACGCCAGAGGGACATGTCCATGCTCG
TGGGTCTGGCCATGGTGGCCCTGCCAGAGTGCTCGCCACAGGGTGTCTCCAACATCGCCT
GGGCTTTGTCCAAGATTGGCGGTGATCTGCTATACCTGCCAGAGATGGATAGGATAGCTG
ATGTGGCCATGGCCAAGGTTCAAGACTTCAATGCACAGAACGTTGCCAATGTTGCAGGAG
CATTCGCTTCCATGCGCCAATCAGCACCGGGGCTTTTTTCATCTCTGGCCATGAGAGCAG
CACAACTGCTGCAAACATTCAAGGAGCAAGAGCTTGCTCAATTCTTATGGGGTTGTGCTT
CTCTGAACGAGTGCCCACATCCCTTGCTTGATGCACTAGATACTGCTTTTCAAAATGATA
CCAGTTTTCAATGCCATGTAACTGATATAAAATCAAGCGCGCATTGGAGCTCAGCAGAAG
AACTTTCTGGTGGAGAAGATGGTAGTACGAGCAGTGCCCGTACTCTGAACTTCAACCGAG
ATCAGGTTGGGAATATTGCTTGGTCCTATGCTGTTATTGGGCAAATGGACCGTCCATTCT
TTTCACATATGTGGAGAACTCTAAGTCGCTTCGAAGAGCAACGGGTTTCGGATCAGTATA
GAGAAGACATGATGTTTGCTTCACAAGTATATCTTGCAAACCAGTCTTTGAAGCTTGAAT
ACCGGAATCTTGGACTGTGCTTAAGAAGTGATCTTGAGGAGAAAATAGCAAAAGCTGGAA
AGAGCAAAAGGTTCAACCAGAAGACAACTTCTTCATTTCAAAAGGAGGTTGGTCGTCTCC
TCTATAGTACCGGGCATGAGTGGGTTAGAGAATATGCCATCGATGGTTACACTGTTGATG
CCGTGTTAGTTGATGAGAAGCTTGCATTTGAGATAGATGGGCCAACACACTTCTCTAGGA
ATTTAGGTACACCATTAGGCCACACAGCATTTAAACGACGCTACATTACTGCTTCTGGGT
GGAAGTTAGTTTCGTTGTCTCTTCAAGAGTGGGAGAACCTACAAGGTGAGTTTGAACAAT
TGGAATATTTGAGGAGAATATTAGACATAGAGGCTGAATAAGCGGCAACACTCTGGGCAA
TGGAGATTAAGCAAGAATGCATCTGCTTTTACAAGAGTACTCATTTTACAACCACACTGG
CCTTCCCAAAAGTTCAGTCCACTTGTACATTTCTTGTGAATCTGTCTGGAAACAGAAGTG
CTCCACTGAGCCCTGGAAAGTTAGATTTTAGCTGAGCATTGGTAATGAGAAATACAATTT
AAAGTTCAGACTAATGTGTGACATGTTAGTTTTCGGGGGACTATTTTGTGCCAGAGAAGA
AAGTATTGCTGAAGCTTGTAATTCTTGAAACAATGCAGCGGGCTATAAAC