Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039422_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:3:3904555:3910739:1 gene:Zm00001d039422 gene_biotype:protein_coding transcript_biotype:protein_coding description:phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein
Sequence

ATGCACGCCAGGTTCCTCAGCGCGCCGTCCCCTGCCTCCGCCGCCCCCTCCCCGTACGTT
CGCTTGGCCTTCACGGGCGCCCTCCCGCGCCGCGCGTGTTGGAAGCCGCGAGGCCCCGCG
TCCGCGTCCGCGCCGCCGCCTCGGCCTCTCCACTCGCTGTGCGCCCGGGCCTCCATGCAG
CCCGCCTCTCCCGCGCACGACGGGCATGGTGGTCCGCCGGTGCACGGCGTCTCCAACACC
GTCATCGGGGTCCTGGGGGGCGGTCAGCTCGGGAAGATGCTCTGCCATGCAGCGAGTCAG
ATGGGGATTAGAATTGTCATCCTCGACCCTCTTCCCGGCTGCCCCGCGAGCTCGGTTTGC
GATGAGCACGTCATCGGGAGCTTCAACGATGGGGACACGGTCCGGGAGTTCGCCAAGAGG
TGTGGGGTCCTAACAGTGGAGATTGAGCATGTTGATGCCGCCACACTGGAGAAGCTGGAA
AAACAGGGCGTTGACTGCGAGCCTAAAGCCTCCACAATCACGATTATTCAGGACAAGTAC
AGGCAGAAAAAGCATTTCTCAAGATACGAGATCCCATTGCCTGACTTCATGGAAGTAGAT
ACTTTACGCAGTATAGAGGAGGCTGGGGAAAAGTTTGGCTATCCCCTAATGGTCAAAAGC
AAGAGATTAGCATATGATGGTCGAGGAAATGCTGTAGCCAAGAACAAAGAGGAGCTATCT
TCTGTTGTTGCTTCACTGGGTGGGTTTGAGCGGGGCTTGTATGTTGAGAGATGGACTCCT
TTCGTAAAGGAGCTTTCTGTAATTGTGGCAAGGAGCAGAGACAACTCTACTGTCTGCTAT
CCTGTTGTGGAAACAGTTCACAAGGAAAATATATGCCATGTTGTTGAAGCTCCTGCTGAT
GTATCTAACAAAATAAAGAAGTTAGCTACTAGCGTGGCTGAAAAAGCTATCAAATCATTA
GAAGGAGCTGGTGTCTTTGCTGTAGAGTTGTTTTTAACAGAAGATGATCAGGTTTTTTTG
GACCATCTACATATTTTTTCAAAATTTATTCCTCTTGGAGTGGTGTTTACATCATTATCC
TTGTGTTGTTCTTTCTCTAGATTTTATTGA

Peptide Sequence

PEP ID

Zm00001d039422_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:3:3904555:3910739:1 gene:Zm00001d039422 transcript:Zm00001d039422_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein
Sequence

MHARFLSAPSPASAAPSPYVRLAFTGALPRRACWKPRGPASASAPPPRPLHSLCARASMQ
PASPAHDGHGGPPVHGVSNTVIGVLGGGQLGKMLCHAASQMGIRIVILDPLPGCPASSVC
DEHVIGSFNDGDTVREFAKRCGVLTVEIEHVDAATLEKLEKQGVDCEPKASTITIIQDKY
RQKKHFSRYEIPLPDFMEVDTLRSIEEAGEKFGYPLMVKSKRLAYDGRGNAVAKNKEELS
SVVASLGGFERGLYVERWTPFVKELSVIVARSRDNSTVCYPVVETVHKENICHVVEAPAD
VSNKIKKLATSVAEKAIKSLEGAGVFAVELFLTEDDQVFLDHLHIFSKFIPLGVVFTSLS
LCCSFSRFY

Transcript Sequence

Transcript ID

Zm00001d039422_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:3904555:3910739:1 gene:Zm00001d039422 gene_biotype:protein_coding transcript_biotype:protein_coding description:phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein
Sequence

GACGGCCTACGCTCAAAAAACACAAATCGCTTTCCGCGCCGCCGCCGCGCCGCCGACCGG
CGCTCCTCACCTCTCCCGCCGCACCCATCGTCCCCCCGTTCCCGGCTAAACCCTGCTTGA
GCCCTAGACACCGCCCGCCTCCGGGAGGTAGAGAGCATGCACGCCAGGTTCCTCAGCGCG
CCGTCCCCTGCCTCCGCCGCCCCCTCCCCGTACGTTCGCTTGGCCTTCACGGGCGCCCTC
CCGCGCCGCGCGTGTTGGAAGCCGCGAGGCCCCGCGTCCGCGTCCGCGCCGCCGCCTCGG
CCTCTCCACTCGCTGTGCGCCCGGGCCTCCATGCAGCCCGCCTCTCCCGCGCACGACGGG
CATGGTGGTCCGCCGGTGCACGGCGTCTCCAACACCGTCATCGGGGTCCTGGGGGGCGGT
CAGCTCGGGAAGATGCTCTGCCATGCAGCGAGTCAGATGGGGATTAGAATTGTCATCCTC
GACCCTCTTCCCGGCTGCCCCGCGAGCTCGGTTTGCGATGAGCACGTCATCGGGAGCTTC
AACGATGGGGACACGGTCCGGGAGTTCGCCAAGAGGTGTGGGGTCCTAACAGTGGAGATT
GAGCATGTTGATGCCGCCACACTGGAGAAGCTGGAAAAACAGGGCGTTGACTGCGAGCCT
AAAGCCTCCACAATCACGATTATTCAGGACAAGTACAGGCAGAAAAAGCATTTCTCAAGA
TACGAGATCCCATTGCCTGACTTCATGGAAGTAGATACTTTACGCAGTATAGAGGAGGCT
GGGGAAAAGTTTGGCTATCCCCTAATGGTCAAAAGCAAGAGATTAGCATATGATGGTCGA
GGAAATGCTGTAGCCAAGAACAAAGAGGAGCTATCTTCTGTTGTTGCTTCACTGGGTGGG
TTTGAGCGGGGCTTGTATGTTGAGAGATGGACTCCTTTCGTAAAGGAGCTTTCTGTAATT
GTGGCAAGGAGCAGAGACAACTCTACTGTCTGCTATCCTGTTGTGGAAACAGTTCACAAG
GAAAATATATGCCATGTTGTTGAAGCTCCTGCTGATGTATCTAACAAAATAAAGAAGTTA
GCTACTAGCGTGGCTGAAAAAGCTATCAAATCATTAGAAGGAGCTGGTGTCTTTGCTGTA
GAGTTGTTTTTAACAGAAGATGATCAGGTTTTTTTGGACCATCTACATATTTTTTCAAAA
TTTATTCCTCTTGGAGTGGTGTTTACATCATTATCCTTGTGTTGTTCTTTCTCTAGATTT
TATTGAATGAGGTAGCCCCTAGGCCTCACAATAGTGGGCATCACACAATAGAGTCATGCT
ACACCTCACAATATGAGCAGCATATACGCGCTATTCTTGGCCTTCCTCTTGGTGATCCCT
CAATGAAAGCACCTGCAGCAATAATGTACAACATCCTGGGCGAGGATGAGGGTGAAGCAG
GGTTCTTTCTGGCTCATCAGCTTATCAGTAGGGCACTAACCATTCCAGGCACATCGGTCC
ATTGGTACGCAAAGCCAGAGATGCGGAAGCAAAGGAAGATGGGTCATATTACAATTGTGG
GGCCTTCTAAGATAAGTGTAAAATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTG
ATCCCAAGGAAGTTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTG
TGATGAAAGATGCTGAGAGGGTTTTGAAAGAGTTCGACATACCTTGTGAGTTAACTATTG
TTTCTGCACATCGTACACCAGAGCGGATGTATGATTATGCGAAGTCTGCTAAAGACAGGG
GTTTCGAGGTCATAATTGCAGGTGCAGGCGGAGCAGCTCATTTACCAGGGATGGTGGCTT
CATTGACTCCTCTTCCTGTAATCGGAGTTCCCATTAAGACTTCAACACTATCAGGATTTG
ATTCCCTCCTATCTATTGTGCAAATGCCAAAAGGTATTCCTGTTGCGACTGTTGCTATCG
GGATTGCAGAAAATGCAGGTTTGCTGGCAGCTAGGATTCTGGCTGCAAGAGATCCTGAGC
TCCAGGACAGGGTAACTAAGTACCAGGATGATCTGAGGGACATGGTTTTGGAGACGGCAG
AAAGGCTGGAGGACCAAGGCCCGGAGGAATTTCTGAAGGGAATGGATTGACCCCTTTTGA
AGCCCTGGCTCTGGGGCCTGGGAGGAATACGAGTGTATTATGGGTCGGCGATAACTCACT
GTCCACTCGATTATGGTTTAAGATGGGGAGTCATCAAGAAGATACTTTAATAGGCTCGGC
TGCATTCGATTTTCCTTACAATTCTTTTTTGATAATTGTGCTATCTTAACCCATCTCAAC
ATGCCCTTTTCCCTTCTAATATAGGGTATGAATTTTGGGTTTAGAGGGGGAAAAAAGAAT
GGGAGTAAACGTTGTACGTACGAAAAATAAAACGGTTCGAGTAACGTAAAAAACATGCCT
GGATTTTTCAGCCGCACAAGTTGCTTTGAG