Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039407_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:3614006:3618190:1 gene:Zm00001d039407 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	ATGGAGGCGCCGCCGGGACCGGGGCCCATGGAGCTGGACGCCCCACCTCCCGCCGCCGCC GCCGCGGCGATTCCTCCCGCCGGCAGCGACAAGCACAAGGACGGGGAAGGGGGAGACGCT GTGACGGGCCATATCATCTCCACCACCATCGGCGGGAAGAACGGCGAGCCCAAGCGGACC ATCAGTTACATGGCAGAACGTGTCGTGGGCACAGGCTCATTTGGGATCGTCTTCCAGGCT AAGTGTCTGGAAACAGGAGAGACCTTCGCCATCAAGAAGGTGCTGCAAGATCGGCGTTAC AAGAACCGGGAGCTGCAACTTATGCGTGCCATGGAGCACCCCAACGTCATCTGCCTGAAG CACTGCTTCTTCTCGACAACGAGCAGGGACGAATTGTTTTTAAACCTTGTCATGGAATTC GTCCCTGAGACTCTATACCGAGTCCTGAAGCACTACAGCAATGCGAACCAGAGGATGCCT CTTATCTACGTCAAGCTCTACATGTATCAGCTTTTTAGAGGCCTAGCTTATATTCATAAT GTACCAGGAGTCTGCCATAGGGATGTGAAGCCACAAAACGTTTTGGTATGTGTCATGTGG ACAAGGATTTGTTCTTCCTTTGATTTGGTAATTAGTTCTGAATTGGTCTCGTCGTCTCTC TTTGATGTACAGGTTGATCCTCTCACCCACCAGGTCAAGCTCTGTGACTTTGGTAGTGCA AAAGTTCTGATTCCTGGTGAACCGAACATATCTTACATATGCTCTCGTTACTATCGTGCC CCTGAGCTCATATTTGGTGCGACGGAGTATACAAGTTCAATAGACATATGGTCAGCTGGT TGTGTTCTAGCTGAGTTGCTTCTTGGACAGCCACTATTTCCAGGAGAGAGCGCTGTTGAT CAGTTGGTAGAGATCATCAAGGTTCTTGGTACTCCAACCCGTGAGGAGATACGGTGCATG AATCCCAACTATACTGAGTTCAGGTTTCCTCAGATAAAGGCTCATCCATGGCACAAGATT TTCCACAAGAGAATGCCTCCTGAAGCCATAGACCTTGCTTCTCGTCTCCTTCAGTATTCA CCAAGTCTTCGCTGCTCTGCTCTTGACGCATGTGCTCATCCCTTCTTCGATGAGCTGCGG ACACCGAACGCACGCCTACCAAACGGCCGCCCGTTCCCTCCGCTCTTTAACTTCAAGCAC GAACTAGCAAATGCCTCTCCGGACCTCGTCAGCAGGCTTGTGCCGGAGCACATTAGACGG CAGATCGGTGTCAACTTCGGGAGCAGCTAG

Peptide Sequence

PEP ID	Zm00001d039407_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:3614006:3618190:1 gene:Zm00001d039407 transcript:Zm00001d039407_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	MEAPPGPGPMELDAPPPAAAAAAIPPAGSDKHKDGEGGDAVTGHIISTTIGGKNGEPKRT ISYMAERVVGTGSFGIVFQAKCLETGETFAIKKVLQDRRYKNRELQLMRAMEHPNVICLK HCFFSTTSRDELFLNLVMEFVPETLYRVLKHYSNANQRMPLIYVKLYMYQLFRGLAYIHN VPGVCHRDVKPQNVLVCVMWTRICSSFDLVISSELVSSSLFDVQVDPLTHQVKLCDFGSA KVLIPGEPNISYICSRYYRAPELIFGATEYTSSIDIWSAGCVLAELLLGQPLFPGESAVD QLVEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKIFHKRMPPEAIDLASRLLQYS PSLRCSALDACAHPFFDELRTPNARLPNGRPFPPLFNFKHELANASPDLVSRLVPEHIRR QIGVNFGSS

Transcript Sequence

Transcript ID	Zm00001d039407_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:3614006:3618190:1 gene:Zm00001d039407 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shaggy-related protein kinase iota
Sequence	ATCGCAAAGCCAGCCAGCCAGCCAGCCAGCAGCGGCTGTCCCAAGCTGTCCAAAGCCAAG CCAAGCGCGGCGCGGCGGCAGTCCTCTCCTCGCAGTCGCAGCAGGGCCGAGCCGACCGGT CAAAAGCACTGCTGCCCCACCCCAACCCACCACCATCCCCGTTCCCCAACCCCCAAAGCC GAGAGCCATCCCGCCCGCAGCCGCAACCAGGCAAGCAAGCGGGAGCCGCCAACTCGTGCC TCTCGGCAGCGGCGTCTGAACTCTGAACCGACCGACCGACCGACCGTTCCGTTCCGTTCA CCCCACCATGGAGGCGCCGCCGGGACCGGGGCCCATGGAGCTGGACGCCCCACCTCCCGC CGCCGCCGCCGCGGCGATTCCTCCCGCCGGCAGCGACAAGCACAAGGACGGGGAAGGGGG AGACGCTGTGACGGGCCATATCATCTCCACCACCATCGGCGGGAAGAACGGCGAGCCCAA GCGGACCATCAGTTACATGGCAGAACGTGTCGTGGGCACAGGCTCATTTGGGATCGTCTT CCAGGCTAAGTGTCTGGAAACAGGAGAGACCTTCGCCATCAAGAAGGTGCTGCAAGATCG GCGTTACAAGAACCGGGAGCTGCAACTTATGCGTGCCATGGAGCACCCCAACGTCATCTG CCTGAAGCACTGCTTCTTCTCGACAACGAGCAGGGACGAATTGTTTTTAAACCTTGTCAT GGAATTCGTCCCTGAGACTCTATACCGAGTCCTGAAGCACTACAGCAATGCGAACCAGAG GATGCCTCTTATCTACGTCAAGCTCTACATGTATCAGCTTTTTAGAGGCCTAGCTTATAT TCATAATGTACCAGGAGTCTGCCATAGGGATGTGAAGCCACAAAACGTTTTGGTATGTGT CATGTGGACAAGGATTTGTTCTTCCTTTGATTTGGTAATTAGTTCTGAATTGGTCTCGTC GTCTCTCTTTGATGTACAGGTTGATCCTCTCACCCACCAGGTCAAGCTCTGTGACTTTGG TAGTGCAAAAGTTCTGATTCCTGGTGAACCGAACATATCTTACATATGCTCTCGTTACTA TCGTGCCCCTGAGCTCATATTTGGTGCGACGGAGTATACAAGTTCAATAGACATATGGTC AGCTGGTTGTGTTCTAGCTGAGTTGCTTCTTGGACAGCCACTATTTCCAGGAGAGAGCGC TGTTGATCAGTTGGTAGAGATCATCAAGGTTCTTGGTACTCCAACCCGTGAGGAGATACG GTGCATGAATCCCAACTATACTGAGTTCAGGTTTCCTCAGATAAAGGCTCATCCATGGCA CAAGATTTTCCACAAGAGAATGCCTCCTGAAGCCATAGACCTTGCTTCTCGTCTCCTTCA GTATTCACCAAGTCTTCGCTGCTCTGCTCTTGACGCATGTGCTCATCCCTTCTTCGATGA GCTGCGGACACCGAACGCACGCCTACCAAACGGCCGCCCGTTCCCTCCGCTCTTTAACTT CAAGCACGAACTAGCAAATGCCTCTCCGGACCTCGTCAGCAGGCTTGTGCCGGAGCACAT TAGACGGCAGATCGGTGTCAACTTCGGGAGCAGCTAGGAGGGCAGGCGCTGTGATGGTCG AAGTTTTCGGTCTTGGTTTCCCCTTCTGGAGAGTGGGAGGGGCTCAAGCAGTACCTGAGA AAAGTAGTGAAACCGTGTAAATTATCTGACCGTGAAGGAGTACTACCGCCAGTAACTGGC GCATGTTCGTCCAGTAGTTATGGTAAGAATGTAGGAGGTGGAGACTGGTTAATGTGTAGG GTCGTTTTTTTTGTTTTGTTTTGATATTACTACCATTTTGTTGTAATGTTCGTCGGTACT TCCAGCAGTAGTGTAGCTGGCCACGTTTTGTTCGTCCGCCATGATGTAAATGATCATCGC CCAACTGTAATGCATGTTCTCTCTGATCGTTTCGTAGTCC