Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039401_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:3433891:3437244:1 gene:Zm00001d039401 gene_biotype:protein_coding transcript_biotype:protein_coding description:CID11

Sequence

ATGGCGGCGGCGGTGGCAGAGGGATCGGCTTCTTCGGCGGCGAAGGAGGTGGAGTACCAG
GCGGGCGTGCAGAAGCTGGTGGACCTGCTGTCCAACCTCAACCCGGCCGCCAAGGAGTTC
GTCCCCTCCGCGGCCGCGTCTCCGCCCAAGAAGGCGCTGTCGGCGGATGCGCCGGTGTTC
GATTACCACTCCATCGGAGGCGGGAATGGGGCCACCGACGCTGCGTTTTACGTTGGGTTT
GGGCACCAGCCGCGCACGAGGGGGAATGGATACATCAACCAAGGAAGGAGGAGGACAAAT
GGTAGAGTGAGGCGGGCAGACAGAGAGGACAGCATTAGGCGAACTGTTTATGTCTCTGAA
CTTGACCATACTGTGACAGAGGAGAGACTTGCTGATATCTTTACCACCTGTGGGCAAGTT
GTTGATTGCAGAATTTGTGGTGATCCCCACTCAGTTCTTAGGTTTGCATTCATTGAGTTC
TCTGATGAAGAGGGCGCCAGAACTGCGCTTAACCTGGGAGGCACAATTTTTGGTTTCTAC
CCTGTTAGAGTTTTGCCGTCAAAGACAGCTATCTTACCTGTTAATCCAAAGTTTCTTCCC
AGGACGGATGACGAGAAGGAAATGGTCATGCGAACTGTCTATTGTACAAACATAGATAAG
ATGGTTACTCAGTTAGATGTAAAGAAATTCTTTGAAGAACTTTGCGGTGAGGTCTCTCGG
TTGAGGCTTCTAGGGGATAATGTACATTCCACAAGGATTGCTTTTGTTGAATTTGTCCAT
GCTGAGGGTGCCATCATGGCTCTGAATTGCAGCGGGATGATTTTGGGAACACTGCCTGGT
GAGCCCTTCCAAGACTCCGGTGAAGCCCCGTGTAAATCGAGTGGGATCTAA

Peptide Sequence

PEP ID

Zm00001d039401_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:3433891:3437244:1 gene:Zm00001d039401 transcript:Zm00001d039401_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:CID11

Sequence

MAAAVAEGSASSAAKEVEYQAGVQKLVDLLSNLNPAAKEFVPSAAASPPKKALSADAPVF
DYHSIGGGNGATDAAFYVGFGHQPRTRGNGYINQGRRRTNGRVRRADREDSIRRTVYVSE
LDHTVTEERLADIFTTCGQVVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFY
PVRVLPSKTAILPVNPKFLPRTDDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSR
LRLLGDNVHSTRIAFVEFVHAEGAIMALNCSGMILGTLPGEPFQDSGEAPCKSSGI

Transcript Sequence

Transcript ID

Zm00001d039401_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:3433891:3437244:1 gene:Zm00001d039401 gene_biotype:protein_coding transcript_biotype:protein_coding description:CID11

Sequence

GATCCTCTCTCGCGTACATTTCCCAGTCTCCACCCCGGAAATGGCCAGAACCTGAGGCAC
TAGAACCCACCCGCCCGCGGCTCTCTCCAGCAGCCCCCCAATCCATCGACGCCGTTGGCG
AGGGCGCACAGGCGCGCGTCGCACCACATCCGCCACCCACAACACACCACCGTCCTCATC
TCCGGTGTGCAGGCAGAGACGCGGGATGGCCTCGCGCCAGTAGTATCCGCCCGGCACTTT
CTACCCCACCCATCCGGCCGCGGGTGGGTTTGACCGAGATCGGCAGGCGGCCGTCGGCGT
CTCGCTCGCTCGATCCGCCTCGTCTCAGTCCTACCTAGGTATGGCGGCGGCGGTGGCAGA
GGGATCGGCTTCTTCGGCGGCGAAGGAGGTGGAGTACCAGGCGGGCGTGCAGAAGCTGGT
GGACCTGCTGTCCAACCTCAACCCGGCCGCCAAGGAGTTCGTCCCCTCCGCGGCCGCGTC
TCCGCCCAAGAAGGCGCTGTCGGCGGATGCGCCGGTGTTCGATTACCACTCCATCGGAGG
CGGGAATGGGGCCACCGACGCTGCGTTTTACGTTGGGTTTGGGCACCAGCCGCGCACGAG
GGGGAATGGATACATCAACCAAGGAAGGAGGAGGACAAATGGTAGAGTGAGGCGGGCAGA
CAGAGAGGACAGCATTAGGCGAACTGTTTATGTCTCTGAACTTGACCATACTGTGACAGA
GGAGAGACTTGCTGATATCTTTACCACCTGTGGGCAAGTTGTTGATTGCAGAATTTGTGG
TGATCCCCACTCAGTTCTTAGGTTTGCATTCATTGAGTTCTCTGATGAAGAGGGCGCCAG
AACTGCGCTTAACCTGGGAGGCACAATTTTTGGTTTCTACCCTGTTAGAGTTTTGCCGTC
AAAGACAGCTATCTTACCTGTTAATCCAAAGTTTCTTCCCAGGACGGATGACGAGAAGGA
AATGGTCATGCGAACTGTCTATTGTACAAACATAGATAAGATGGTTACTCAGTTAGATGT
AAAGAAATTCTTTGAAGAACTTTGCGGTGAGGTCTCTCGGTTGAGGCTTCTAGGGGATAA
TGTACATTCCACAAGGATTGCTTTTGTTGAATTTGTCCATGCTGAGGGTGCCATCATGGC
TCTGAATTGCAGCGGGATGATTTTGGGAACACTGCCTGGTGAGCCCTTCCAAGACTCCGG
TGAAGCCCCGTGTAAATCGAGTGGGATCTAACTGACTCTGCGCAAGCTGAACTGGATTGT
TCACGGGAAGGCGTCGCCATAAGCTGAAGGCTTCCGCGGTCCGGTGCATCATGATGCGTC
TGCTCACATTCTTACAAACGTTTTCTTTGTACCCTTTTGCAAACCTGTTGTTGGAAGGGA
ACTGGTTAGATCAGGCCCTTCTATAGCCAGCTTTCGGTTTCTCCTGTTTCACTGGACGTG
ATGGAACCACTGAGGATGACTATCTTGGCAATCAGCCATCAAAGTAACTTCTGTTAATGT
CCTTGTTGTTAAGCTAA