Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d039390_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:3168983:3171512:1 gene:Zm00001d039390 gene_biotype:protein_coding transcript_biotype:protein_coding description:transmembrane protein
Sequence

ATGGGTTGGCCGGTGCGCGTGCGGAGCCCCTCGGTGCTGCAGTCCAAGCTGCTGTGCCTG
TCCCTGCTCTACCTCCTCACCACGCTGCCGCTCGCGCTCTACGTCTCCTTCACCGACTCC
GGCCGCCGCCGCCGCTGCCTCCAGCCCGTCCCCTCCCCGCCCAAGCCGCTCTTCCAGTAC
CCGGCCGGGTACGGCGAGCACAGGCACGCCCTGCCCACCTCGCGCGCGCTCTGCTCCAAC
CCCGTCGCCTTCGCAGACTACAAGACTGCTTTGGAAGAGATCCATGGCCTCTGCCGCGAC
ACCTCGGCGTCCCCTGCGTTGCGGTACCAGAGCGGCAGGAGGGCCACGTTTGCAGGGAAC
TTGTCGACCCAGGAACGGAGATCCTTCTTCAACCACACTGATGACCAAGTGGCGGTTCCC
TGTGGGTTCTTCCGTGAATTTCCCGTCCCAGAACCTGACAGACTGGCCATGGAGAAGTGC
AGGGGCGTGGTGGTGGCGTCGGCGATCATGAACGACCACGACAAGGTCCGTCAGCCCAGG
GGCCTGGGCGCCGAGACGCTACGCGCGGCGTGCTTCTTCCTGTTCATCGACGACGCCACC
CGCGCGGCCCTCGCGCGGCAGGGCGTCCTGCCGGCGCGCGGCGGCGGCGGCCACACCACG
GTCGGCGCGTGGCGCGTGGTGACGGTGGGTCGTCGTCGCGCCGGCGGCGGCGGGCTCCCC
TACGAGGACCCCGCGATGAACGGCGTCGTGGCCAAGCACCTGCTGCACCGGCTGTTCCCG
GGCGCCAGGTTCAGCGTGTGGGTGGACGGCAAGGTGCAGCTCACGGTGGACCCGGTGCTG
CTGGTGCACGCGCTCCTGGTCCGCGAGCGCGCCGACGTGGCCGTGTCCAGGCACCCCTTC
AACCGGCACACCATGGAGGAGGCCATCGCGACGGCGCGGTGGCGCAAGTGCCGCGACGTG
GACGCCGTCAGGGCGCAGATGGAGACATACTGCGGCAACGGCCTGCGCCCATGGTCCCCC
AGCAAGCTTCCCTATCCGTCGGATGTGCCGGACACGGCGGTCATCATCCGGAGGCACGGC
GTGGCCAGCGACCTCTTCTCCTGCCTGCTGTTCAATGAGCTGGAGGCGTTCAGCCCGCGG
GACCAGCTCGCCTTCGCCTACGTCAGGGACCAGATGAGCCCCAAGCTGAGCATCAACATG
TTCGAGGTCGAGGTGTTCGAGCAGATCGCCGTCGAGTACCGGCACAACCTCAAGCCTGGC
CGAGGGAAGCGGCAGCAGGGGGGCACTAGGATGGCGTCCTCGAGAGACATCGCCGGGAGC
AGCTGCGAAGAGTACCTTCACCAGATGTGGGGGGAGTCTGCTGCTGAGTAA

Peptide Sequence

PEP ID

Zm00001d039390_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:3168983:3171512:1 gene:Zm00001d039390 transcript:Zm00001d039390_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:transmembrane protein
Sequence

MGWPVRVRSPSVLQSKLLCLSLLYLLTTLPLALYVSFTDSGRRRRCLQPVPSPPKPLFQY
PAGYGEHRHALPTSRALCSNPVAFADYKTALEEIHGLCRDTSASPALRYQSGRRATFAGN
LSTQERRSFFNHTDDQVAVPCGFFREFPVPEPDRLAMEKCRGVVVASAIMNDHDKVRQPR
GLGAETLRAACFFLFIDDATRAALARQGVLPARGGGGHTTVGAWRVVTVGRRRAGGGGLP
YEDPAMNGVVAKHLLHRLFPGARFSVWVDGKVQLTVDPVLLVHALLVRERADVAVSRHPF
NRHTMEEAIATARWRKCRDVDAVRAQMETYCGNGLRPWSPSKLPYPSDVPDTAVIIRRHG
VASDLFSCLLFNELEAFSPRDQLAFAYVRDQMSPKLSINMFEVEVFEQIAVEYRHNLKPG
RGKRQQGGTRMASSRDIAGSSCEEYLHQMWGESAAE

Transcript Sequence

Transcript ID

Zm00001d039390_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:3168983:3171512:1 gene:Zm00001d039390 gene_biotype:protein_coding transcript_biotype:protein_coding description:transmembrane protein
Sequence

CAGAGTCCCAGTGCCCGGTCCTCGCGCGCCCTGATCAGGAGGAGTGGTCGAGCGGAGCAA
GTGGCGGCGTCCGGCAGAGCCAAGCGTCGCGGCAGCCAAGGAACTCCTGCATCTGCATGG
GTTGGCCGGTGCGCGTGCGGAGCCCCTCGGTGCTGCAGTCCAAGCTGCTGTGCCTGTCCC
TGCTCTACCTCCTCACCACGCTGCCGCTCGCGCTCTACGTCTCCTTCACCGACTCCGGCC
GCCGCCGCCGCTGCCTCCAGCCCGTCCCCTCCCCGCCCAAGCCGCTCTTCCAGTACCCGG
CCGGGTACGGCGAGCACAGGCACGCCCTGCCCACCTCGCGCGCGCTCTGCTCCAACCCCG
TCGCCTTCGCAGACTACAAGACTGCTTTGGAAGAGATCCATGGCCTCTGCCGCGACACCT
CGGCGTCCCCTGCGTTGCGGTACCAGAGCGGCAGGAGGGCCACGTTTGCAGGGAACTTGT
CGACCCAGGAACGGAGATCCTTCTTCAACCACACTGATGACCAAGTGGCGGTTCCCTGTG
GGTTCTTCCGTGAATTTCCCGTCCCAGAACCTGACAGACTGGCCATGGAGAAGTGCAGGG
GCGTGGTGGTGGCGTCGGCGATCATGAACGACCACGACAAGGTCCGTCAGCCCAGGGGCC
TGGGCGCCGAGACGCTACGCGCGGCGTGCTTCTTCCTGTTCATCGACGACGCCACCCGCG
CGGCCCTCGCGCGGCAGGGCGTCCTGCCGGCGCGCGGCGGCGGCGGCCACACCACGGTCG
GCGCGTGGCGCGTGGTGACGGTGGGTCGTCGTCGCGCCGGCGGCGGCGGGCTCCCCTACG
AGGACCCCGCGATGAACGGCGTCGTGGCCAAGCACCTGCTGCACCGGCTGTTCCCGGGCG
CCAGGTTCAGCGTGTGGGTGGACGGCAAGGTGCAGCTCACGGTGGACCCGGTGCTGCTGG
TGCACGCGCTCCTGGTCCGCGAGCGCGCCGACGTGGCCGTGTCCAGGCACCCCTTCAACC
GGCACACCATGGAGGAGGCCATCGCGACGGCGCGGTGGCGCAAGTGCCGCGACGTGGACG
CCGTCAGGGCGCAGATGGAGACATACTGCGGCAACGGCCTGCGCCCATGGTCCCCCAGCA
AGCTTCCCTATCCGTCGGATGTGCCGGACACGGCGGTCATCATCCGGAGGCACGGCGTGG
CCAGCGACCTCTTCTCCTGCCTGCTGTTCAATGAGCTGGAGGCGTTCAGCCCGCGGGACC
AGCTCGCCTTCGCCTACGTCAGGGACCAGATGAGCCCCAAGCTGAGCATCAACATGTTCG
AGGTCGAGGTGTTCGAGCAGATCGCCGTCGAGTACCGGCACAACCTCAAGCCTGGCCGAG
GGAAGCGGCAGCAGGGGGGCACTAGGATGGCGTCCTCGAGAGACATCGCCGGGAGCAGCT
GCGAAGAGTACCTTCACCAGATGTGGGGGGAGTCTGCTGCTGAGTAAGGCGGCCTTTGCA
AATGCAAGACCATTCTTTTTTTTAATTTAAATGCAGGAGCAGGACCATGCTGCAGGGTAA
TAATTGACAAACTAGAACCTTTTTTCTTGTAAATGATGAAGTGAACAAGTGTAAAAATAA
TAATTAGAAAATTAAGTGACACACATTGGAATAATTGAAACGACTTGGCAGTCA