Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039362_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:2569180:2574119:-1 gene:Zm00001d039362 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR repeat-containing thioredoxin TTL1
Sequence	ATGTCCCACCGCCCGCCGGCGCCAATGCCGGACACCCTCTCGGACGCCTTCGCCGCCGCG GTGCTCCTCTCCTCCACCGACAAGCCGGACACGCTGCCCCCGGGGAGGCTCTCGCCCGTC TCCCCGCTCCCGCACTCCTCCAAGCACGGGCACCACCACCCGACCCCGAGCTCCTCCTCG GGCTCCTCCGGCTCCGTCTCCCGGGCCCCGCTCGCGCCCGCCTCCGGCCTCGCCTCGCGC CGGAGCCACTCCGGCGAGATCCCGCTCCCTTCCGAGGCGCCCCCGCGCCACCGCCGCACA GGCTCCGGCCCACTCATCTTCACATCCGGCGCGTGCTCCAGCTCCGCCACCTCGCCGCTC ACCAACGCGCTCCCCGCGGGCAACATCTGTCCCTCCGGCCGCCTCGCCAAACCGCTCCCG TCCCCCTGCCCCGTCGCGACCCCGCCGCCCCGCGCCTCCCGCCACGACGTGCTCGGCTCC GGGACCGCCAACTACGGCCACGGGAGCATCGTCCGCTCCCGCGGCGGGGGCGCCGTGCCC GCCGCCACCGACGACGACGCGGTCCTCAGGCGCGCCATGTCGGCCGCCGACCCCGAGGAG GTCAAGAGGGCCGGGAACGACCTATACAGGAAGGGCTGCTTCGAGGGGGCCCTCAGGCTC TACGACCGCGCCCTCGCCCTCTGCCCCGACAATGCTGCGTGCCGGGGCAACCGCGCCGCC GCTCTCATTGGCCTCGACCGCCTCGGCGAAGCCGTCAAGGAGTGTGAGGAGGCGCTACGG ATTGATCCGTCCTACGGCCGCGCGCACCACCGCCTCGCGTCGCTGCATATAAGGCTAGGA CACATTGAGGATGCTCTGAAGCACTTGTCACTTGCAACCCCACAGCCTGACCTCCTAGAA TTGCACAAATTGCAAACAGTGGAGAAGCACTTGGGGAGATGTCTGGATGCGCGAAAGGCT GGGGACTGGAAGAGTGTGCTAAGGGAAAGTGATGCAGCTATTGCGGCTGGAGCTGACTCC TCGGCTCTGCTCTTGGCTGCTAGAGCAGAAGCCCTTCTCCGTCTCAATTTACTTGATGAG GCTGATCTTGCAATCTCTAGTGCCTCCAAATTGGATTATACATCTTCATGCTCCTCAGAC ACCAAATTTTGTGGGTTTCTTGCCAACGCCTACCTGTTTTATGTACATGCCCAAATTGAC ATGTCATCAGGAAGGTTTGACCATGCGGTCTCCTCCATAGATAAGGCTAGGATAATAGAT CCAGGAAACACTGAAGTGGTAAACATGCATAACAAAGTGAAATCTGTGGCCAGAGCACGT TCTCTAGGGAACGAGCTCTTCAATTCTGGAAAATTTTCAGAAGCTTGCGTTGCTTATGGT GAAGGGCTCAAGCAACACCCTATGAACAAAGTTCTGTACTGTAATAGGGCAGCTTGTAGG TTCAAGCTTGAGCAGTGGGAGAAGTCAATTGAAGACTGTAATGAAGCTCTCAAGATTCAA TCCAATTATACCAAGGCTTTGCTCAGGCGGGCAGCATCCTACGGCAAGATGGAAAGATGG GTTGAATCTGTGAAGGATTATGAGATTCTCAGAAAAGAACTTCCAGGTGACGCGGAGGTT GCTGAGGCCTATTTCCACGCCCAGGTTGCTCTCAAGTCATCTCGTGGTGAGGAGGTATCC AACATGAAATTTGGAGGAGAGGTTGAAACAATTATAGGAATGGAACAGTTCCAGATGGCC ACATCTTTGCCAGGTGTTTCAGTCATCCATTTCATGACGCCTTCCAATCAGCAGTGCTGC AAGGTTTCCCCATTCGTGAACACACTGTGCGCCAGATACCCATCTGTTAATTTCCTCAAG GTCGATGTGAACGAGAGCCCTGCTGTCGCACGCGCCGAAAACGTGAGGACAATTCCAACG TTCAAAATCTACAAAAATGGTATTAGAGTCAAAGAGATGATTTGCCCCAGCCAACAGCTG CTGGAATATTCAGTGAGGCATTTTGGGATTTAG

Peptide Sequence

PEP ID	Zm00001d039362_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:2569180:2574119:-1 gene:Zm00001d039362 transcript:Zm00001d039362_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR repeat-containing thioredoxin TTL1
Sequence	MSHRPPAPMPDTLSDAFAAAVLLSSTDKPDTLPPGRLSPVSPLPHSSKHGHHHPTPSSSS GSSGSVSRAPLAPASGLASRRSHSGEIPLPSEAPPRHRRTGSGPLIFTSGACSSSATSPL TNALPAGNICPSGRLAKPLPSPCPVATPPPRASRHDVLGSGTANYGHGSIVRSRGGGAVP AATDDDAVLRRAMSAADPEEVKRAGNDLYRKGCFEGALRLYDRALALCPDNAACRGNRAA ALIGLDRLGEAVKECEEALRIDPSYGRAHHRLASLHIRLGHIEDALKHLSLATPQPDLLE LHKLQTVEKHLGRCLDARKAGDWKSVLRESDAAIAAGADSSALLLAARAEALLRLNLLDE ADLAISSASKLDYTSSCSSDTKFCGFLANAYLFYVHAQIDMSSGRFDHAVSSIDKARIID PGNTEVVNMHNKVKSVARARSLGNELFNSGKFSEACVAYGEGLKQHPMNKVLYCNRAACR FKLEQWEKSIEDCNEALKIQSNYTKALLRRAASYGKMERWVESVKDYEILRKELPGDAEV AEAYFHAQVALKSSRGEEVSNMKFGGEVETIIGMEQFQMATSLPGVSVIHFMTPSNQQCC KVSPFVNTLCARYPSVNFLKVDVNESPAVARAENVRTIPTFKIYKNGIRVKEMICPSQQL LEYSVRHFGI

Transcript Sequence

Transcript ID	Zm00001d039362_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:2569180:2574119:-1 gene:Zm00001d039362 gene_biotype:protein_coding transcript_biotype:protein_coding description:TPR repeat-containing thioredoxin TTL1
Sequence	GCCGCCCACGGCCGTCGGTCTCGCGCAGGGCAAATCTACCCCGCTCGCTCGGGCTCGGGC CGCCCCACCCACCCACCCCACCACGCCTCCTCGAGCTTCATCATCATTCCTTGCTTCCTC CCTGCCCTCCTCCCTCTTCCGCTTCCGCTTCCCGAGATCCCCATCCGGCCACCCCCATCC TCTGACCGCACCTCCATGCCGCACTAGCTCGCCCGCCCACTCTCCACCCAGCACCCGCCG CGCAGCGAGATCCAGCGCCGCCCGCTCCCCGCAGGTGCTCGGCGGAATGTCCCACCGCCC GCCGGCGCCAATGCCGGACACCCTCTCGGACGCCTTCGCCGCCGCGGTGCTCCTCTCCTC CACCGACAAGCCGGACACGCTGCCCCCGGGGAGGCTCTCGCCCGTCTCCCCGCTCCCGCA CTCCTCCAAGCACGGGCACCACCACCCGACCCCGAGCTCCTCCTCGGGCTCCTCCGGCTC CGTCTCCCGGGCCCCGCTCGCGCCCGCCTCCGGCCTCGCCTCGCGCCGGAGCCACTCCGG CGAGATCCCGCTCCCTTCCGAGGCGCCCCCGCGCCACCGCCGCACAGGCTCCGGCCCACT CATCTTCACATCCGGCGCGTGCTCCAGCTCCGCCACCTCGCCGCTCACCAACGCGCTCCC CGCGGGCAACATCTGTCCCTCCGGCCGCCTCGCCAAACCGCTCCCGTCCCCCTGCCCCGT CGCGACCCCGCCGCCCCGCGCCTCCCGCCACGACGTGCTCGGCTCCGGGACCGCCAACTA CGGCCACGGGAGCATCGTCCGCTCCCGCGGCGGGGGCGCCGTGCCCGCCGCCACCGACGA CGACGCGGTCCTCAGGCGCGCCATGTCGGCCGCCGACCCCGAGGAGGTCAAGAGGGCCGG GAACGACCTATACAGGAAGGGCTGCTTCGAGGGGGCCCTCAGGCTCTACGACCGCGCCCT CGCCCTCTGCCCCGACAATGCTGCGTGCCGGGGCAACCGCGCCGCCGCTCTCATTGGCCT CGACCGCCTCGGCGAAGCCGTCAAGGAGTGTGAGGAGGCGCTACGGATTGATCCGTCCTA CGGCCGCGCGCACCACCGCCTCGCGTCGCTGCATATAAGGCTAGGACACATTGAGGATGC TCTGAAGCACTTGTCACTTGCAACCCCACAGCCTGACCTCCTAGAATTGCACAAATTGCA AACAGTGGAGAAGCACTTGGGGAGATGTCTGGATGCGCGAAAGGCTGGGGACTGGAAGAG TGTGCTAAGGGAAAGTGATGCAGCTATTGCGGCTGGAGCTGACTCCTCGGCTCTGCTCTT GGCTGCTAGAGCAGAAGCCCTTCTCCGTCTCAATTTACTTGATGAGGCTGATCTTGCAAT CTCTAGTGCCTCCAAATTGGATTATACATCTTCATGCTCCTCAGACACCAAATTTTGTGG GTTTCTTGCCAACGCCTACCTGTTTTATGTACATGCCCAAATTGACATGTCATCAGGAAG GTTTGACCATGCGGTCTCCTCCATAGATAAGGCTAGGATAATAGATCCAGGAAACACTGA AGTGGTAAACATGCATAACAAAGTGAAATCTGTGGCCAGAGCACGTTCTCTAGGGAACGA GCTCTTCAATTCTGGAAAATTTTCAGAAGCTTGCGTTGCTTATGGTGAAGGGCTCAAGCA ACACCCTATGAACAAAGTTCTGTACTGTAATAGGGCAGCTTGTAGGTTCAAGCTTGAGCA GTGGGAGAAGTCAATTGAAGACTGTAATGAAGCTCTCAAGATTCAATCCAATTATACCAA GGCTTTGCTCAGGCGGGCAGCATCCTACGGCAAGATGGAAAGATGGGTTGAATCTGTGAA GGATTATGAGATTCTCAGAAAAGAACTTCCAGGTGACGCGGAGGTTGCTGAGGCCTATTT CCACGCCCAGGTTGCTCTCAAGTCATCTCGTGGTGAGGAGGTATCCAACATGAAATTTGG AGGAGAGGTTGAAACAATTATAGGAATGGAACAGTTCCAGATGGCCACATCTTTGCCAGG TGTTTCAGTCATCCATTTCATGACGCCTTCCAATCAGCAGTGCTGCAAGGTTTCCCCATT CGTGAACACACTGTGCGCCAGATACCCATCTGTTAATTTCCTCAAGGTCGATGTGAACGA GAGCCCTGCTGTCGCACGCGCCGAAAACGTGAGGACAATTCCAACGTTCAAAATCTACAA AAATGGTATTAGAGTCAAAGAGATGATTTGCCCCAGCCAACAGCTGCTGGAATATTCAGT GAGGCATTTTGGGATTTAGGCCATGAAGCCCCCGATGATTCGATGTTCGTTTCCTTCTGC CTCCAGCTAGCTTCTCTGGAGCGAGCACAGCACAGGCTTTAGCCGGGAGCAGAACCAGTC AAGCTCATCTTGACGAAGGCAAGCATGAAAATTGGAAAGCGAAGAGCAACTCTTCCCCGG CATTTTCCACCCCCACAGCCCCTTACGTTTTTCGTCCTATTCTCCATTTGTTGATTACCT GCTTAATTTATTCTTTCAATCTGTCTCGTCCGTACATCATTGTTGCCAAATTTCTTTAGA ACAAAAGAAACATCCTCTCCTGATTCATGTGAAGAATGACTGTACATTTTTTTACTTCCA TGTTTACCAGACAACCAAGGAAAGAAAGGTATAGATTGCATTTTGTACG