Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039346_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:2195056:2197943:-1 gene:Zm00001d039346 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-acetic acid-amido synthetase GH3.6
Sequence	ATGGCGGAGAAGCAGGGCGACGAGTGTGGCAGCTTCAGCGCGGAGGAGGTGATCGCCAAG TTCGAGCGGCTGACGCGGGACGCCGCGGCCGTCCAGCGGGAGACGCTGCGGCGGATCCTC GCCGACAACGCCGGCGCTGAGTACCTCCGAGGTCTGGGCCTGGGCGGCCGCACCGACCCG GACAGCTTCCGGGCCTGCGTACCGCTCGCCACGCACGCGGACATGGAGCCCTACATTGCG CGCATCGCCGACGAGGGCGACACCTCCCACGTCCTCACCGCCACGCCCGTCACCTCCATC TCCCTCAGCTCCGGCACGACGCAGGGGAAGCGCAAGTACCTGCTGTTCAATGACGACCTC TTCAAGTGCGCTATGCAGACAGGCCAGACTAGCTTCGCTTTCAGGAACAGGGCTTTCCCC GTGGAAGACGGAAAGTCGCTGCAGTTCATTTACGCCAGCCGGCAATTCAAGACCAAGGGC GGGCTCACGGCGACGACGGCGACCACCAACGTGTACCGTCACAGGGACTTCAAGGCCCAC ATGCGGCACACCCAGTCGGAGTGCTGCAGCCCCAGCGAGGTGCTCTTCTGCCCGGACTTC GCCGAGTCCCTCTACTGCCACCTCCTCTGCGGCCTGGTCCTCGCCGACGACGTCCGCACG GTGTCCGCCACCTTCGCCCACAGCCTCGTGCTCGCCTTCCGGACATTCGAGCGGGTGTGG GAGGAGCTGTGCGCCGACATCCGCCACGGCGTCCCGTCGCCGACGCGGGTCACCAGCCCG GCCGTCCGGCGGGCCGTGTCGGCCCTCCTCGTCGCGCCGAACCCCGCCCTCGCCGACGAG GTGGCGCGCAGGTGCCGCGGGCTCGTCAACTGGCGCGGCGTGATCCCGGCGCTGTGGCCC AGGGCTAGGTATGTGAGCAGCATCGTGACGGGGTCCATGGAGCACTACGTGAAGAAGCTC CGGCACTACGCCGGCGCCCTGCCGCTGGTCGCCCTGGACTACGGCGCGACGGAGGGGATG ATCGCGGCCAACGTCGAGCCCCGGGAGCCACCGGAGTCCGCCACGTTCGCCGTGCTCCCC AACATCGCCTACTTCGAGTTTATCCCTCTGAGCCTCAGGGGATGCGATGTAGCCGGTGCC GCGGACGCGCGCTACACGGAGGCGGATCCCGTCGGCCTGACAGACGTCGCCGTCGGTGAG CATTACGAGGTCGTGATGACCACCTTCGCGGGGCTGTACCGGTACCGTCTGGGCGACGTG GTGAAGGTGGCCGGTCTCTACAACTCGACGCCCAAGCTCAAGGTGGTGTGCCGGCGGAAC CTCGTGCTGTCCATCAACATCGACAAGAACAGCGAGCACGACCTCCAGCTCGCCGTCGAC AGCGCGGCCAAGGTCCTGGCCGCGGGCGCGGGGAGGCTGGAGGTCGTGGACTACACCAGC CACGCAGACGTGTCGCGCGACCCGGGGCACTACGTGGTGTTCTGGGAGCTGAGCGCCGAG CCCGACGGCGACGGCCACGTCCTGCAGAGCTGCTGCGACGAGCTGGACCGCGCGTTCACG GACCCCGGGTACGTGGGGTCCCGGAAGGCGCGCGCCATCGGCCCGCTGGAACTGCGGGTG CTGCGGAGAGGCACCTTCCAGAAGGTGCTGCGGCACTACCTCTCCCTCGGCTCCCCCGTG AACCAGTTCAAGCTGCCACGGTGCGTCGCGCCGTCCAGCTCCGCCGCCGGCGTCCTTGAG ATCCTCGCCGCCAACGCCGTGGAGGCCTTCTTCAGCACGGCCTACGACTGA

Peptide Sequence

PEP ID	Zm00001d039346_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:2195056:2197943:-1 gene:Zm00001d039346 transcript:Zm00001d039346_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-acetic acid-amido synthetase GH3.6
Sequence	MAEKQGDECGSFSAEEVIAKFERLTRDAAAVQRETLRRILADNAGAEYLRGLGLGGRTDP DSFRACVPLATHADMEPYIARIADEGDTSHVLTATPVTSISLSSGTTQGKRKYLLFNDDL FKCAMQTGQTSFAFRNRAFPVEDGKSLQFIYASRQFKTKGGLTATTATTNVYRHRDFKAH MRHTQSECCSPSEVLFCPDFAESLYCHLLCGLVLADDVRTVSATFAHSLVLAFRTFERVW EELCADIRHGVPSPTRVTSPAVRRAVSALLVAPNPALADEVARRCRGLVNWRGVIPALWP RARYVSSIVTGSMEHYVKKLRHYAGALPLVALDYGATEGMIAANVEPREPPESATFAVLP NIAYFEFIPLSLRGCDVAGAADARYTEADPVGLTDVAVGEHYEVVMTTFAGLYRYRLGDV VKVAGLYNSTPKLKVVCRRNLVLSINIDKNSEHDLQLAVDSAAKVLAAGAGRLEVVDYTS HADVSRDPGHYVVFWELSAEPDGDGHVLQSCCDELDRAFTDPGYVGSRKARAIGPLELRV LRRGTFQKVLRHYLSLGSPVNQFKLPRCVAPSSSAAGVLEILAANAVEAFFSTAYD

Transcript Sequence

Transcript ID	Zm00001d039346_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:2195056:2197943:-1 gene:Zm00001d039346 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-acetic acid-amido synthetase GH3.6
Sequence	ATGGCGGAGAAGCAGGGCGACGAGTGTGGCAGCTTCAGCGCGGAGGAGGTGATCGCCAAG TTCGAGCGGCTGACGCGGGACGCCGCGGCCGTCCAGCGGGAGACGCTGCGGCGGATCCTC GCCGACAACGCCGGCGCTGAGTACCTCCGAGGTCTGGGCCTGGGCGGCCGCACCGACCCG GACAGCTTCCGGGCCTGCGTACCGCTCGCCACGCACGCGGACATGGAGCCCTACATTGCG CGCATCGCCGACGAGGGCGACACCTCCCACGTCCTCACCGCCACGCCCGTCACCTCCATC TCCCTCAGCTCCGGCACGACGCAGGGGAAGCGCAAGTACCTGCTGTTCAATGACGACCTC TTCAAGTGCGCTATGCAGACAGGCCAGACTAGCTTCGCTTTCAGGAACAGGGCTTTCCCC GTGGAAGACGGAAAGTCGCTGCAGTTCATTTACGCCAGCCGGCAATTCAAGACCAAGGGC GGGCTCACGGCGACGACGGCGACCACCAACGTGTACCGTCACAGGGACTTCAAGGCCCAC ATGCGGCACACCCAGTCGGAGTGCTGCAGCCCCAGCGAGGTGCTCTTCTGCCCGGACTTC GCCGAGTCCCTCTACTGCCACCTCCTCTGCGGCCTGGTCCTCGCCGACGACGTCCGCACG GTGTCCGCCACCTTCGCCCACAGCCTCGTGCTCGCCTTCCGGACATTCGAGCGGGTGTGG GAGGAGCTGTGCGCCGACATCCGCCACGGCGTCCCGTCGCCGACGCGGGTCACCAGCCCG GCCGTCCGGCGGGCCGTGTCGGCCCTCCTCGTCGCGCCGAACCCCGCCCTCGCCGACGAG GTGGCGCGCAGGTGCCGCGGGCTCGTCAACTGGCGCGGCGTGATCCCGGCGCTGTGGCCC AGGGCTAGGTATGTGAGCAGCATCGTGACGGGGTCCATGGAGCACTACGTGAAGAAGCTC CGGCACTACGCCGGCGCCCTGCCGCTGGTCGCCCTGGACTACGGCGCGACGGAGGGGATG ATCGCGGCCAACGTCGAGCCCCGGGAGCCACCGGAGTCCGCCACGTTCGCCGTGCTCCCC AACATCGCCTACTTCGAGTTTATCCCTCTGAGCCTCAGGGGATGCGATGTAGCCGGTGCC GCGGACGCGCGCTACACGGAGGCGGATCCCGTCGGCCTGACAGACGTCGCCGTCGGTGAG CATTACGAGGTCGTGATGACCACCTTCGCGGGGCTGTACCGGTACCGTCTGGGCGACGTG GTGAAGGTGGCCGGTCTCTACAACTCGACGCCCAAGCTCAAGGTGGTGTGCCGGCGGAAC CTCGTGCTGTCCATCAACATCGACAAGAACAGCGAGCACGACCTCCAGCTCGCCGTCGAC AGCGCGGCCAAGGTCCTGGCCGCGGGCGCGGGGAGGCTGGAGGTCGTGGACTACACCAGC CACGCAGACGTGTCGCGCGACCCGGGGCACTACGTGGTGTTCTGGGAGCTGAGCGCCGAG CCCGACGGCGACGGCCACGTCCTGCAGAGCTGCTGCGACGAGCTGGACCGCGCGTTCACG GACCCCGGGTACGTGGGGTCCCGGAAGGCGCGCGCCATCGGCCCGCTGGAACTGCGGGTG CTGCGGAGAGGCACCTTCCAGAAGGTGCTGCGGCACTACCTCTCCCTCGGCTCCCCCGTG AACCAGTTCAAGCTGCCACGGTGCGTCGCGCCGTCCAGCTCCGCCGCCGGCGTCCTTGAG ATCCTCGCCGCCAACGCCGTGGAGGCCTTCTTCAGCACGGCCTACGACTGAAGCAAGCAA CCGGGCACGTTGCACGATGATGGGAAGGAAGGCCGCCGTCGTGGCAGCTCTCAGCATCAG TCGCAGGCTTGCAGCTTTAAAAGCTCTTGTGTGTGTAGTGTACTGTTTCTCTTTTAGGGC ATGAGCATCTGTCGATCTGCTGAGCTTGCATCTGCCGATCTGCTTATCCCTGTATTATTA GT