Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039345_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:2191276:2193951:-1 gene:Zm00001d039345 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-acetic acid-amido synthetase GH3.6
Sequence	ATGTCGGGGAAGAAGGCCAGCGAGTTCAGCGGCGAGGAGCAGCAACAGGTGATCGCCGAG TTCGAACGGCTGACGCGGGATGCTGCCGCCGTCCAGCCGGAGACGCTGCGGCGGATCCTC GACGAGAACGCCGGCGTCGAGTACCTCCAGGGGTTAGGCCTCGACGGCCGCACCGACCCG GACACCTTCCGGGCCTGCGTGCCGCTCGCCACGCACGACGACCTGGAGCCCTACATCGCG CGCCTCGCCGACGGCGACACCTCCCCCGTCCTCACCGCCAAACCCATCACCTCCATCTCC CTCAGCTCCGGCACGACGCAGGGGAGGCGCAAGTACTTGCCCTTCAACGACGAGCTATTC AAGCTGACGATGCATGTGTACCGGACCTCCTTCGCCTTCAGGAACAGGGCGTTCCCCGTC GAGGGCGGCGGCAAGGCGCTGCAGTTCGTCTACGGCAGCCGGCAGCTCACCACCAAGGGC GGCCTGACGGTGGCCTCGGCCACCACGCACCTGTACCGCAACGAGGGGTACAAGGCCGCG GTGCGCGGCATCCAGCTGCCGTGCTGCAGCCCCGACGAGGTGGTCTTCGCCGCGGACTTC GCGCAGTCGCTCTACTGCCACCTCCTCTGCGGCCTGCTCTACGCCGACGAGGTCCGGACC GTGTTCGCCGTGTTCGGCCACAACCTCGTGCTCGCGCTCCAGACGCTGGAGCGGGCGTGG GAGGAGCTGTGCCACGACATCCGCCGCGGCGCCCTGTCGCCGGCGCGGGTGACCGAGCCG GAGCTCCGGCAGGCCGTGTCCGCGCTCCTCGCGAAGCCGAACCCCGCGCTGGCCGACGAG GTGGCGCGCCGGTGCGCCGAGGCCAGGCTCGGCGGCTGGCGCGGGCTGGTCCACGCGCTG TGGCCCAACGCCAGGTACGTGCACACGATCGTGACGGGCTCCATGGAGCACTACGTCAGG AAGCTCCGGCACTACGCCGGTGGCCTGCCGCTCGTCGCCATGGACTACGGCGCGTCGGAG GGGATGGTCGGTGCCAACGTCGAGCCGGAGGTGCCACCGGACTCGGCAACGTTCGCCGTG CTCCCCAACATCGCCTACTTCGAGTTCATCCCGCTCAAGACCACCACCAATGGCGGCGGC GGTAGCAGAGCGGACTGTACTGATACCGGCGGCACGAGCTACAGCTCCGGGGCGGATCCC GTCGGCCTGACGGAGGTCACCGTCGGCGAGCACTACGAGGTTGTCATGACCACCTTCGCA GGGTTGTACCGGTACCGTCTGGGTGACGTGGTGAAGGTGGCCGGCTTCTACAACTCGACG CCCAAGCTCAAGTTCGTGAGCCGGGGATCGATCGGCCCCACGCTGTGCATCAACGTCGAC AAGAACACGGAGCAGGACGTGCAGCTCGCCGTGGATGGCGCGGCCGAGATACTGACCTCC TCGAGCAGGCTGGAGGTGGTGGACTACACCAGCCACGCGGACGTGTCGACGGACCCGGGC CACTACGTCGTTTTCTGGGAACTCAGTGGCGAGGCCGCCGCCGACGGCGTGCTGCAGCGC TGCTGCGACGAGCTGGACCGGCGCTTCGTCGATGCCGGGTACGTGAGCGCCAGGAAGACG CGCGCCATCGGGCCCCTGGAGCTACGTGTGCTGCGGCGGGGCGCCTTCCAGAAGGTGCTG CACCACTGCCTCTCCCTCGGCGCTCCGGCGAACCAGTTCAAGCTGCCGAGGTGCGTCGCC CGGTCCAACTCCGGCGTCCTCCAGGTCCTCTCTGACAACACCATCAAAATCTTCTTCAGC ACAACCTACGACTGA

Peptide Sequence

PEP ID	Zm00001d039345_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:2191276:2193951:-1 gene:Zm00001d039345 transcript:Zm00001d039345_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-acetic acid-amido synthetase GH3.6
Sequence	MSGKKASEFSGEEQQQVIAEFERLTRDAAAVQPETLRRILDENAGVEYLQGLGLDGRTDP DTFRACVPLATHDDLEPYIARLADGDTSPVLTAKPITSISLSSGTTQGRRKYLPFNDELF KLTMHVYRTSFAFRNRAFPVEGGGKALQFVYGSRQLTTKGGLTVASATTHLYRNEGYKAA VRGIQLPCCSPDEVVFAADFAQSLYCHLLCGLLYADEVRTVFAVFGHNLVLALQTLERAW EELCHDIRRGALSPARVTEPELRQAVSALLAKPNPALADEVARRCAEARLGGWRGLVHAL WPNARYVHTIVTGSMEHYVRKLRHYAGGLPLVAMDYGASEGMVGANVEPEVPPDSATFAV LPNIAYFEFIPLKTTTNGGGGSRADCTDTGGTSYSSGADPVGLTEVTVGEHYEVVMTTFA GLYRYRLGDVVKVAGFYNSTPKLKFVSRGSIGPTLCINVDKNTEQDVQLAVDGAAEILTS SSRLEVVDYTSHADVSTDPGHYVVFWELSGEAAADGVLQRCCDELDRRFVDAGYVSARKT RAIGPLELRVLRRGAFQKVLHHCLSLGAPANQFKLPRCVARSNSGVLQVLSDNTIKIFFS TTYD

Transcript Sequence

Transcript ID	Zm00001d039345_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:2191276:2193951:-1 gene:Zm00001d039345 gene_biotype:protein_coding transcript_biotype:protein_coding description:Indole-3-acetic acid-amido synthetase GH3.6
Sequence	CGCTAACGCTGTAATGCATCATCGATCAGCTAGCTGGTGTCGTTACAGGGAGCTAGCGCA TCAACTTCTCTCTTCCAACTTTATTTGCAGCGGCGCGGCAAGCTAGATGTCGGGGAAGAA GGCCAGCGAGTTCAGCGGCGAGGAGCAGCAACAGGTGATCGCCGAGTTCGAACGGCTGAC GCGGGATGCTGCCGCCGTCCAGCCGGAGACGCTGCGGCGGATCCTCGACGAGAACGCCGG CGTCGAGTACCTCCAGGGGTTAGGCCTCGACGGCCGCACCGACCCGGACACCTTCCGGGC CTGCGTGCCGCTCGCCACGCACGACGACCTGGAGCCCTACATCGCGCGCCTCGCCGACGG CGACACCTCCCCCGTCCTCACCGCCAAACCCATCACCTCCATCTCCCTCAGCTCCGGCAC GACGCAGGGGAGGCGCAAGTACTTGCCCTTCAACGACGAGCTATTCAAGCTGACGATGCA TGTGTACCGGACCTCCTTCGCCTTCAGGAACAGGGCGTTCCCCGTCGAGGGCGGCGGCAA GGCGCTGCAGTTCGTCTACGGCAGCCGGCAGCTCACCACCAAGGGCGGCCTGACGGTGGC CTCGGCCACCACGCACCTGTACCGCAACGAGGGGTACAAGGCCGCGGTGCGCGGCATCCA GCTGCCGTGCTGCAGCCCCGACGAGGTGGTCTTCGCCGCGGACTTCGCGCAGTCGCTCTA CTGCCACCTCCTCTGCGGCCTGCTCTACGCCGACGAGGTCCGGACCGTGTTCGCCGTGTT CGGCCACAACCTCGTGCTCGCGCTCCAGACGCTGGAGCGGGCGTGGGAGGAGCTGTGCCA CGACATCCGCCGCGGCGCCCTGTCGCCGGCGCGGGTGACCGAGCCGGAGCTCCGGCAGGC CGTGTCCGCGCTCCTCGCGAAGCCGAACCCCGCGCTGGCCGACGAGGTGGCGCGCCGGTG CGCCGAGGCCAGGCTCGGCGGCTGGCGCGGGCTGGTCCACGCGCTGTGGCCCAACGCCAG GTACGTGCACACGATCGTGACGGGCTCCATGGAGCACTACGTCAGGAAGCTCCGGCACTA CGCCGGTGGCCTGCCGCTCGTCGCCATGGACTACGGCGCGTCGGAGGGGATGGTCGGTGC CAACGTCGAGCCGGAGGTGCCACCGGACTCGGCAACGTTCGCCGTGCTCCCCAACATCGC CTACTTCGAGTTCATCCCGCTCAAGACCACCACCAATGGCGGCGGCGGTAGCAGAGCGGA CTGTACTGATACCGGCGGCACGAGCTACAGCTCCGGGGCGGATCCCGTCGGCCTGACGGA GGTCACCGTCGGCGAGCACTACGAGGTTGTCATGACCACCTTCGCAGGGTTGTACCGGTA CCGTCTGGGTGACGTGGTGAAGGTGGCCGGCTTCTACAACTCGACGCCCAAGCTCAAGTT CGTGAGCCGGGGATCGATCGGCCCCACGCTGTGCATCAACGTCGACAAGAACACGGAGCA GGACGTGCAGCTCGCCGTGGATGGCGCGGCCGAGATACTGACCTCCTCGAGCAGGCTGGA GGTGGTGGACTACACCAGCCACGCGGACGTGTCGACGGACCCGGGCCACTACGTCGTTTT CTGGGAACTCAGTGGCGAGGCCGCCGCCGACGGCGTGCTGCAGCGCTGCTGCGACGAGCT GGACCGGCGCTTCGTCGATGCCGGGTACGTGAGCGCCAGGAAGACGCGCGCCATCGGGCC CCTGGAGCTACGTGTGCTGCGGCGGGGCGCCTTCCAGAAGGTGCTGCACCACTGCCTCTC CCTCGGCGCTCCGGCGAACCAGTTCAAGCTGCCGAGGTGCGTCGCCCGGTCCAACTCCGG CGTCCTCCAGGTCCTCTCTGACAACACCATCAAAATCTTCTTCAGCACAACCTACGACTG AAGTTGCCAGACGGTGGCGCGGCGACCATGACAAATCAGGCGGTCTGCTGTGAGTGACAG AATTTAGCGCCAAGAGCGACTGGTTTTCTTTTGAAAAGTTGCACTCTCATGCGTGCCTAC GAGCCTGTTCGCATGATTTTAATGCTTACAGACTTCTACTGCTTATATAGTGTTTTGTCT CTCTATATATTACAACTACAGCAGTTCGAATCGAACAGCTGGAGTGTTTTCTGCATCTTT TTTGTTTGCCGTTATTTTCTGCATCTTTTTTTTGGCCGTTATTTTTACGCGTGGCTTGTT TGCTTGCAAAAG