Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d039331_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:3:2014008:2017590:1 gene:Zm00001d039331 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit E
Sequence	ATGACGGCCGGCGCTGGCGAGCCCCGCCGTATAGTCCTCCTCCTAGACCTCGATACCTTC CTCCCCACTTCCAGCTCAAGCACCCCCGCTGCCGCCTCCTACCTCGCCGAAGTCCTGCCC GCCGCCACCTCCCTGCTCGCCGCCTGCCGGTCCCCGGCGTCCCTCTCCGCGGGGCGCCTC TTCTTCTCCTCCCTCTCCCCGATCCTCTCCTCCTCCCTCCTCCCTAGGCCGCTCCCGGCC GCCCCCACCCCGCTCTCCTTCGACCTCCACCCGGCCACCCTCGCGTCCCTCGCCCCGCTC CGCTGCCTGGCGCTCCGGGCGACCCCCGCGCACCCGCGCGCCCCCGCCTCCTCGTCAGTC GCCAAATCTCTCCTCCAGCTTGAGCACGACTACTCCTGGGACCACGACCCCCCTCGCCGC CGTCGCTGCCGCGGCTTCGATCCGCCGCCCAATCTGGTGGCTCTCTTCACGCCCGTCACG GAATTCGATCTGTTCGGGGACGACGCCAGCTTCGTCGAGAAATTCCGCAAGGTTTTCGGT CCTGTCAGGGACCGCCTCTCGGCGATTGGTCTACAGGTGTGCTGGGTCGTCGTCCCATCC GCCTCCGTCTCCGCCTCTGCCGCCGCCAGTGAGGGGATCAGGAGGGCGGTCACCGAGCTG GGCTGGTGGTTCACTACCGCCGATGCGGTCGCGTTGGGGTCGGCCGTTGCACCGCCGGCG CTCGTGTGGGGAGGTGTTGGACTTGGCGGCGGGGAAGGTGGACGGCGAGGGGAGGTGGTG TTGGAGATCGCGGATGTGGAGGGCAAACCACTTGTCTGCAAGGGCTGTGAGGTCGAGGTG GTTGGCTCCTCACGGTTGCAGCAGGCCAGCGGCAATGCCGTGTCCAGGATACATGTCAGG TCGGTGTGTGAGGCGGGGAATTGGGAGCGGTTGATGGATGGGGATGTTGCCGTGGTTCGA GGGTTCCAACGGGAGGGGAGCAAGGCTGACGGTGAAGAAGCTGTAGATAAGGAGTATTTT CCTCATCGGATTCTTGAATTGGTCCTTGGTGACGAGAAGGACCGATTAGGGGTTGCCAAG CCAATTTGGCAGCTAATTTTGGTGTTCCTTAGTAGAAGGAACTATTGTGCAGTAGTCTCA GTTTCTGATGGAGATGGAAACTCCGTAGATGGTGTTCTCATGCCCTTCTCGATGAACTGT GCCTTACTTCATCTTGAGAAGAATGTCATGTCTGCCAAAGCCTCCGAGACGCCAAGTTGT GGTGCATCTGATGAGACAAAGGTCCAGAGTGATAAGAAGAGGAGAAGCAGGCTGGTCGGT AAGCTACTTGAGGTGACCACCTGGAGTACCTTCTGTGACATGCTTCGCAAACGTGCTGAT GGAAGCATGCCGGTGGTGGACTTGGAGGATCTATATTTCAGCAGGCATGAGCTGCAGATC TTGCTTAGAATGGAAATGATCAAATCTGAACTCGGGTCTGCCATAGAGGAAGGTTCAAAA CAGAAAATGATAAAAGACATCTGCTCGCTTCTGCAATTTATTGACATCAATCTCCAAGGG GATTCTTTTCAGTCTGACGGTATTCTTGAGTATGCTGAAAAGACCATAAAGTCGAGGTAC ATCAACTCCATGGAGGATGTGATCAAGAAGATCTACAGGGAGATGGAGTTTGATTTATTT GATGACGACGACGGAGTTGACTACTCAGATTCTCTACCCAGCAGCAGCAACCAGGACGAC GGCAGGTGCCGCAGCCAGCGGGGCTCCGACAGCGCGAGCGCCTCCGCGCTCCACCTGCTG CAGCGGGACGCCAGGAGCAGCCGGCAGCGCGAGGACGACGACCGGCACGACAAGCTGACG GCGAGGGCCCGGGAGCGGCGGGACCGGCAGAGGCGGCTCTCCTCCTTCACCAGCTGGGTG CCCGACCTGCGCCGCGTCTGGGCGCTCAAGCACCCGGGGAAAGAGCCGTGCGCGTGGGTG CCGCGGTCCCGGTCCAGGTCGTGCGCGAAGCGGCGGCGGGCCGCGTGCACCGATGTCGTC CTCGAGACGCCGGTGACCTCCGGCAAAAGGCACATGAGCGGGTCGGAGTCCGACGACGCC AGACAGGTGGCGGCGAGGAGGTCCGCCGCGCTCGGGGCCGTGTCCAAGACCTTGTTTGAC GACGAGGTGGTCGAGACTGACGTTAGCTCGAGTAGCACGTAA

Peptide Sequence

PEP ID	Zm00001d039331_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:3:2014008:2017590:1 gene:Zm00001d039331 transcript:Zm00001d039331_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit E
Sequence	MTAGAGEPRRIVLLLDLDTFLPTSSSSTPAAASYLAEVLPAATSLLAACRSPASLSAGRL FFSSLSPILSSSLLPRPLPAAPTPLSFDLHPATLASLAPLRCLALRATPAHPRAPASSSV AKSLLQLEHDYSWDHDPPRRRRCRGFDPPPNLVALFTPVTEFDLFGDDASFVEKFRKVFG PVRDRLSAIGLQVCWVVVPSASVSASAAASEGIRRAVTELGWWFTTADAVALGSAVAPPA LVWGGVGLGGGEGGRRGEVVLEIADVEGKPLVCKGCEVEVVGSSRLQQASGNAVSRIHVR SVCEAGNWERLMDGDVAVVRGFQREGSKADGEEAVDKEYFPHRILELVLGDEKDRLGVAK PIWQLILVFLSRRNYCAVVSVSDGDGNSVDGVLMPFSMNCALLHLEKNVMSAKASETPSC GASDETKVQSDKKRRSRLVGKLLEVTTWSTFCDMLRKRADGSMPVVDLEDLYFSRHELQI LLRMEMIKSELGSAIEEGSKQKMIKDICSLLQFIDINLQGDSFQSDGILEYAEKTIKSRY INSMEDVIKKIYREMEFDLFDDDDGVDYSDSLPSSSNQDDGRCRSQRGSDSASASALHLL QRDARSSRQREDDDRHDKLTARARERRDRQRRLSSFTSWVPDLRRVWALKHPGKEPCAWV PRSRSRSCAKRRRAACTDVVLETPVTSGKRHMSGSESDDARQVAARRSAALGAVSKTLFD DEVVETDVSSSST

Transcript Sequence

Transcript ID	Zm00001d039331_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:2014008:2017590:1 gene:Zm00001d039331 gene_biotype:protein_coding transcript_biotype:protein_coding description:V-type proton ATPase subunit E
Sequence	ATGACGGCCGGCGCTGGCGAGCCCCGCCGTATAGTCCTCCTCCTAGACCTCGATACCTTC CTCCCCACTTCCAGCTCAAGCACCCCCGCTGCCGCCTCCTACCTCGCCGAAGTCCTGCCC GCCGCCACCTCCCTGCTCGCCGCCTGCCGGTCCCCGGCGTCCCTCTCCGCGGGGCGCCTC TTCTTCTCCTCCCTCTCCCCGATCCTCTCCTCCTCCCTCCTCCCTAGGCCGCTCCCGGCC GCCCCCACCCCGCTCTCCTTCGACCTCCACCCGGCCACCCTCGCGTCCCTCGCCCCGCTC CGCTGCCTGGCGCTCCGGGCGACCCCCGCGCACCCGCGCGCCCCCGCCTCCTCGTCAGTC GCCAAATCTCTCCTCCAGCTTGAGCACGACTACTCCTGGGACCACGACCCCCCTCGCCGC CGTCGCTGCCGCGGCTTCGATCCGCCGCCCAATCTGGTGGCTCTCTTCACGCCCGTCACG GAATTCGATCTGTTCGGGGACGACGCCAGCTTCGTCGAGAAATTCCGCAAGGTTTTCGGT CCTGTCAGGGACCGCCTCTCGGCGATTGGTCTACAGGTGTGCTGGGTCGTCGTCCCATCC GCCTCCGTCTCCGCCTCTGCCGCCGCCAGTGAGGGGATCAGGAGGGCGGTCACCGAGCTG GGCTGGTGGTTCACTACCGCCGATGCGGTCGCGTTGGGGTCGGCCGTTGCACCGCCGGCG CTCGTGTGGGGAGGTGTTGGACTTGGCGGCGGGGAAGGTGGACGGCGAGGGGAGGTGGTG TTGGAGATCGCGGATGTGGAGGGCAAACCACTTGTCTGCAAGGGCTGTGAGGTCGAGGTG GTTGGCTCCTCACGGTTGCAGCAGGCCAGCGGCAATGCCGTGTCCAGGATACATGTCAGG TCGGTGTGTGAGGCGGGGAATTGGGAGCGGTTGATGGATGGGGATGTTGCCGTGGTTCGA GGGTTCCAACGGGAGGGGAGCAAGGCTGACGGTGAAGAAGCTGTAGATAAGGAGTATTTT CCTCATCGGATTCTTGAATTGGTCCTTGGTGACGAGAAGGACCGATTAGGGGTTGCCAAG CCAATTTGGCAGCTAATTTTGGTGTTCCTTAGTAGAAGGAACTATTGTGCAGTAGTCTCA GTTTCTGATGGAGATGGAAACTCCGTAGATGGTGTTCTCATGCCCTTCTCGATGAACTGT GCCTTACTTCATCTTGAGAAGAATGTCATGTCTGCCAAAGCCTCCGAGACGCCAAGTTGT GGTGCATCTGATGAGACAAAGGTCCAGAGTGATAAGAAGAGGAGAAGCAGGCTGGTCGGT AAGCTACTTGAGGTGACCACCTGGAGTACCTTCTGTGACATGCTTCGCAAACGTGCTGAT GGAAGCATGCCGGTGGTGGACTTGGAGGATCTATATTTCAGCAGGCATGAGCTGCAGATC TTGCTTAGAATGGAAATGATCAAATCTGAACTCGGGTCTGCCATAGAGGAAGGTTCAAAA CAGAAAATGATAAAAGACATCTGCTCGCTTCTGCAATTTATTGACATCAATCTCCAAGGG GATTCTTTTCAGTCTGACGGTATTCTTGAGTATGCTGAAAAGACCATAAAGTCGAGGTAC ATCAACTCCATGGAGGATGTGATCAAGAAGATCTACAGGGAGATGGAGTTTGATTTATTT GATGACGACGACGGAGTTGACTACTCAGATTCTCTACCCAGCAGCAGCAACCAGGACGAC GGCAGGTGCCGCAGCCAGCGGGGCTCCGACAGCGCGAGCGCCTCCGCGCTCCACCTGCTG CAGCGGGACGCCAGGAGCAGCCGGCAGCGCGAGGACGACGACCGGCACGACAAGCTGACG GCGAGGGCCCGGGAGCGGCGGGACCGGCAGAGGCGGCTCTCCTCCTTCACCAGCTGGGTG CCCGACCTGCGCCGCGTCTGGGCGCTCAAGCACCCGGGGAAAGAGCCGTGCGCGTGGGTG CCGCGGTCCCGGTCCAGGTCGTGCGCGAAGCGGCGGCGGGCCGCGTGCACCGATGTCGTC CTCGAGACGCCGGTGACCTCCGGCAAAAGGCACATGAGCGGGTCGGAGTCCGACGACGCC AGACAGGTGGCGGCGAGGAGGTCCGCCGCGCTCGGGGCCGTGTCCAAGACCTTGTTTGAC GACGAGGTGGTCGAGACTGACGTTAGCTCGAGTAGCACGTAAGCCGACCAGGAGATTGCT GTTTTTTGTTTGTTGATTTGATGAAAAGAGTCGTCGTTGTCTTGGGCATGTTCGTTTCCT CACCCAGCGTCGTTGTTCAGGAAAGGAAATAGAACGAAATGGCAGTGATCTTTACTGTTG TCAGTTCAGT